Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.28□□□□□ -2.2
BRCC3P46736 RPS4XP11-201ENST00000446897 772 ntBASIC1.28□□□□□ -2.2
BRCC3P46736 AC005042.3-201ENST00000453230 174 ntBASIC1.28□□□□□ -2.2
BRCC3P46736 RPS29P23-201ENST00000458635 123 ntBASIC1.28□□□□□ -2.2
BRCC3P46736 RNU7-34P-201ENST00000459394 64 ntBASIC1.28□□□□□ -2.2
BRCC3P46736 COX6CP14-201ENST00000469580 174 ntBASIC1.28□□□□□ -2.2
BRCC3P46736 AP003072.1-201ENST00000531740 145 ntBASIC1.28□□□□□ -2.2
BRCC3P46736 RNU6-1123P-201ENST00000362347 106 ntBASIC1.27□□□□□ -2.21
BRCC3P46736 Y_RNA.202-201ENST00000364083 110 ntBASIC1.27□□□□□ -2.21
BRCC3P46736 Y_RNA.455-201ENST00000384230 98 ntBASIC1.27□□□□□ -2.21
BRCC3P46736 Y_RNA.526-201ENST00000384572 110 ntBASIC1.27□□□□□ -2.21
BRCC3P46736 SNORD115-46-201ENST00000390982 71 ntBASIC1.27□□□□□ -2.21
BRCC3P46736 AL162725.1-201ENST00000435405 301 ntBASIC1.27□□□□□ -2.21
BRCC3P46736 AC079140.2-201ENST00000506193 142 ntBASIC1.27□□□□□ -2.21
BRCC3P46736 RNU6-1096P-201ENST00000517089 102 ntBASIC1.27□□□□□ -2.21
BRCC3P46736 AC090821.2-201ENST00000523552 176 ntBASIC1.27□□□□□ -2.21
BRCC3P46736 RPL21P9-201ENST00000556149 474 ntBASIC1.27□□□□□ -2.21
BRCC3P46736 AC004832.4-201ENST00000608952 331 ntBASIC1.27□□□□□ -2.21
BRCC3P46736 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
BRCC3P46736 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.26□□□□□ -2.21
BRCC3P46736 Y_RNA.64-201ENST00000362845 102 ntBASIC1.26□□□□□ -2.21
BRCC3P46736 SNORD113-8-201ENST00000363497 74 ntBASIC1.26□□□□□ -2.21
BRCC3P46736 SNORD114-27-201ENST00000363766 70 ntBASIC1.26□□□□□ -2.21
BRCC3P46736 Y_RNA.183-201ENST00000363882 113 ntBASIC1.26□□□□□ -2.21
BRCC3P46736 Y_RNA.602-201ENST00000410535 92 ntBASIC1.26□□□□□ -2.21
BRCC3P46736 RPL21P38-201ENST00000418090 167 ntBASIC1.26□□□□□ -2.21
BRCC3P46736 Z98949.2-201ENST00000440996 144 ntBASIC1.26□□□□□ -2.21
BRCC3P46736 STAG3L5P-204ENST00000443759 179 ntBASIC1.26□□□□□ -2.21
BRCC3P46736 HSPE1P13-201ENST00000451143 297 ntBASIC1.26□□□□□ -2.21
BRCC3P46736 RPS20P10-201ENST00000451209 253 ntBASIC1.26□□□□□ -2.21
BRCC3P46736 HSPE1P25-201ENST00000455484 251 ntBASIC1.26□□□□□ -2.21
BRCC3P46736 LINC01399-202ENST00000458450 244 ntBASIC1.26□□□□□ -2.21
BRCC3P46736 RNU6-341P-201ENST00000516973 96 ntBASIC1.26□□□□□ -2.21
BRCC3P46736 AC131281.1-201ENST00000522984 164 ntBASIC1.26□□□□□ -2.21
BRCC3P46736 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.26□□□□□ -2.21
BRCC3P46736 MIR6504-201ENST00000613520 61 ntBASIC1.26□□□□□ -2.21
BRCC3P46736 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.26□□□□□ -2.21
BRCC3P46736 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
BRCC3P46736 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.25□□□□□ -2.21
BRCC3P46736 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.25□□□□□ -2.21
BRCC3P46736 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
BRCC3P46736 snoU2_19.2-201ENST00000363024 80 ntBASIC1.25□□□□□ -2.21
BRCC3P46736 Y_RNA.210-201ENST00000364161 110 ntBASIC1.25□□□□□ -2.21
BRCC3P46736 Y_RNA.222-201ENST00000364264 102 ntBASIC1.25□□□□□ -2.21
BRCC3P46736 Y_RNA.310-201ENST00000365063 113 ntBASIC1.25□□□□□ -2.21
BRCC3P46736 Y_RNA.326-201ENST00000365176 113 ntBASIC1.25□□□□□ -2.21
BRCC3P46736 Y_RNA.383-201ENST00000383855 97 ntBASIC1.25□□□□□ -2.21
BRCC3P46736 RNU6-1080P-201ENST00000383982 107 ntBASIC1.25□□□□□ -2.21
BRCC3P46736 Y_RNA.418-201ENST00000384029 102 ntBASIC1.25□□□□□ -2.21
BRCC3P46736 RNU6-985P-201ENST00000410182 104 ntBASIC1.25□□□□□ -2.21
BRCC3P46736 CALM2P4-201ENST00000430810 426 ntBASIC1.25□□□□□ -2.21
BRCC3P46736 SUMO1P2-201ENST00000452524 304 ntBASIC1.25□□□□□ -2.21
BRCC3P46736 AC233266.1-201ENST00000454518 96 ntBASIC1.25□□□□□ -2.21
BRCC3P46736 RNU7-94P-201ENST00000459576 63 ntBASIC1.25□□□□□ -2.21
BRCC3P46736 OR9P1P-201ENST00000496431 281 ntBASIC1.25□□□□□ -2.21
BRCC3P46736 RNU6-1278P-201ENST00000516130 107 ntBASIC1.25□□□□□ -2.21
BRCC3P46736 RNU6-496P-201ENST00000516145 99 ntBASIC1.25□□□□□ -2.21
BRCC3P46736 RNU6-1116P-201ENST00000517269 99 ntBASIC1.25□□□□□ -2.21
BRCC3P46736 SUMO2P16-201ENST00000519475 264 ntBASIC1.25□□□□□ -2.21
BRCC3P46736 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.25□□□□□ -2.21
BRCC3P46736 AC242852.1-201ENST00000612151 96 ntBASIC1.25□□□□□ -2.21
BRCC3P46736 AL121890.5-201ENST00000620848 304 ntBASIC1.25□□□□□ -2.21
BRCC3P46736 AC244015.1-201ENST00000622301 99 ntBASIC1.25□□□□□ -2.21
BRCC3P46736 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.24□□□□□ -2.21
BRCC3P46736 RNU6-770P-201ENST00000363929 105 ntBASIC1.24□□□□□ -2.21
BRCC3P46736 RNU6-1048P-201ENST00000364054 107 ntBASIC1.24□□□□□ -2.21
BRCC3P46736 RNU4-41P-201ENST00000364426 143 ntBASIC1.24□□□□□ -2.21
BRCC3P46736 SNORD26-201ENST00000384147 75 ntBASIC1.24□□□□□ -2.21
BRCC3P46736 U8.16-201ENST00000391279 133 ntBASIC1.24□□□□□ -2.21
BRCC3P46736 RN7SKP200-201ENST00000410564 320 ntBASIC1.24□□□□□ -2.21
BRCC3P46736 RNU2-14P-201ENST00000411053 191 ntBASIC1.24□□□□□ -2.21
BRCC3P46736 RPS27P16-201ENST00000425758 201 ntBASIC1.24□□□□□ -2.21
BRCC3P46736 HMGN1P10-201ENST00000474557 553 ntBASIC1.24□□□□□ -2.21
BRCC3P46736 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.24□□□□□ -2.21
BRCC3P46736 RNU6-764P-201ENST00000516396 105 ntBASIC1.24□□□□□ -2.21
BRCC3P46736 Y_RNA.721-201ENST00000517207 102 ntBASIC1.24□□□□□ -2.21
BRCC3P46736 MIR376A1-201ENST00000616574 68 ntBASIC1.24□□□□□ -2.21
BRCC3P46736 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.24□□□□□ -2.21
BRCC3P46736 MIRLET7C-201ENST00000362160 84 ntBASIC1.23□□□□□ -2.21
BRCC3P46736 Y_RNA.19-201ENST00000362462 99 ntBASIC1.23□□□□□ -2.21
BRCC3P46736 RNU4-80P-201ENST00000363200 141 ntBASIC1.23□□□□□ -2.21
BRCC3P46736 SNORA63.7-201ENST00000365579 123 ntBASIC1.23□□□□□ -2.21
BRCC3P46736 Y_RNA.380-201ENST00000365663 111 ntBASIC1.23□□□□□ -2.21
BRCC3P46736 Y_RNA.541-201ENST00000384640 113 ntBASIC1.23□□□□□ -2.21
BRCC3P46736 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
BRCC3P46736 RNU6-855P-201ENST00000410395 104 ntBASIC1.23□□□□□ -2.21
BRCC3P46736 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.23□□□□□ -2.21
BRCC3P46736 MTND5P22-201ENST00000458380 195 ntBASIC1.23□□□□□ -2.21
BRCC3P46736 SEPT14P8-201ENST00000508026 178 ntBASIC1.23□□□□□ -2.21
BRCC3P46736 SNORA70.12-201ENST00000516084 153 ntBASIC1.23□□□□□ -2.21
BRCC3P46736 RNA5SP168-201ENST00000516642 112 ntBASIC1.23□□□□□ -2.21
BRCC3P46736 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.23□□□□□ -2.21
BRCC3P46736 AC019176.1-201ENST00000518519 225 ntBASIC1.23□□□□□ -2.21
BRCC3P46736 AL162424.1-201ENST00000602325 221 ntBASIC1.23□□□□□ -2.21
BRCC3P46736 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.23□□□□□ -2.21
BRCC3P46736 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.23□□□□□ -2.21
BRCC3P46736 AC068700.1-201ENST00000565862 3754 ntBASIC1.23□□□□□ -2.21
BRCC3P46736 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
BRCC3P46736 RNU6-801P-201ENST00000364087 105 ntBASIC1.22□□□□□ -2.21
BRCC3P46736 Y_RNA.224-201ENST00000364308 111 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms