Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 SNORA4.2-201ENST00000365313 147 ntBASIC3.3□□□□□ -1.88
GPC1P35052 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
GPC1P35052 MIR577-201ENST00000385196 96 ntBASIC3.3□□□□□ -1.88
GPC1P35052 MIR561-201ENST00000385216 97 ntBASIC3.3□□□□□ -1.88
GPC1P35052 MIR670-201ENST00000390142 98 ntBASIC3.3□□□□□ -1.88
GPC1P35052 RNU6ATAC-201ENST00000408749 126 ntBASIC3.3□□□□□ -1.88
GPC1P35052 AL022718.1-201ENST00000412004 84 ntBASIC3.3□□□□□ -1.88
GPC1P35052 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.3□□□□□ -1.88
GPC1P35052 AL512326.2-201ENST00000426359 151 ntBASIC3.3□□□□□ -1.88
GPC1P35052 AL035398.1-201ENST00000430869 322 ntBASIC3.3□□□□□ -1.88
GPC1P35052 AC006539.3-201ENST00000454258 129 ntBASIC3.3□□□□□ -1.88
GPC1P35052 SNORD105B-201ENST00000458770 79 ntBASIC3.3□□□□□ -1.88
GPC1P35052 MIR4694-201ENST00000578534 80 ntBASIC3.3□□□□□ -1.88
GPC1P35052 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.3□□□□□ -1.88
GPC1P35052 Y_RNA.773-201ENST00000607168 90 ntBASIC3.3□□□□□ -1.88
GPC1P35052 AC012442.3-202ENST00000636742 206 ntBASIC3.3□□□□□ -1.88
GPC1P35052 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
GPC1P35052 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
GPC1P35052 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
GPC1P35052 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
GPC1P35052 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
GPC1P35052 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
GPC1P35052 MFSD8-233ENST00000641482 4860 ntBASIC3.29□□□□□ -1.88
GPC1P35052 RNU6-832P-201ENST00000363319 107 ntBASIC3.29□□□□□ -1.88
GPC1P35052 Y_RNA.241-201ENST00000364470 117 ntBASIC3.29□□□□□ -1.88
GPC1P35052 Y_RNA.360-201ENST00000365512 102 ntBASIC3.29□□□□□ -1.88
GPC1P35052 RNU6-409P-201ENST00000384114 104 ntBASIC3.29□□□□□ -1.88
GPC1P35052 MIR515-2-201ENST00000384883 83 ntBASIC3.29□□□□□ -1.88
GPC1P35052 MIR515-1-201ENST00000384884 83 ntBASIC3.29□□□□□ -1.88
GPC1P35052 RNA5SP144-201ENST00000410846 116 ntBASIC3.29□□□□□ -1.88
GPC1P35052 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC3.29□□□□□ -1.88
GPC1P35052 AC004941.2-201ENST00000427009 228 ntBASIC3.29□□□□□ -1.88
GPC1P35052 AC004812.1-201ENST00000540773 146 ntBASIC3.29□□□□□ -1.88
GPC1P35052 MIR548Z-201ENST00000584743 97 ntBASIC3.29□□□□□ -1.88
GPC1P35052 MIR7851-201ENST00000610611 160 ntBASIC3.29□□□□□ -1.88
GPC1P35052 AL121772.2-201ENST00000614331 297 ntBASIC3.29□□□□□ -1.88
GPC1P35052 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.29□□□□□ -1.88
GPC1P35052 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.29□□□□□ -1.88
GPC1P35052 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
GPC1P35052 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.28□□□□□ -1.88
GPC1P35052 AC096644.4-201ENST00000563417 2912 ntBASIC3.28□□□□□ -1.88
GPC1P35052 RNA5SP124-201ENST00000362739 110 ntBASIC3.28□□□□□ -1.88
GPC1P35052 RNU4-67P-201ENST00000364569 141 ntBASIC3.28□□□□□ -1.88
GPC1P35052 MIR605-201ENST00000385078 83 ntBASIC3.28□□□□□ -1.88
GPC1P35052 RPS23P4-201ENST00000487908 423 ntBASIC3.28□□□□□ -1.88
GPC1P35052 RN7SL636P-201ENST00000497504 294 ntBASIC3.28□□□□□ -1.88
GPC1P35052 SEM1P1-201ENST00000506694 209 ntBASIC3.28□□□□□ -1.88
GPC1P35052 AC104619.4-201ENST00000510773 249 ntBASIC3.28□□□□□ -1.88
GPC1P35052 AC024995.1-201ENST00000523014 93 ntBASIC3.28□□□□□ -1.88
GPC1P35052 MIR4444-1-201ENST00000581696 74 ntBASIC3.28□□□□□ -1.88
GPC1P35052 MIR4444-2-201ENST00000584390 74 ntBASIC3.28□□□□□ -1.88
GPC1P35052 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.28□□□□□ -1.88
GPC1P35052 AC064859.1-201ENST00000624741 174 ntBASIC3.28□□□□□ -1.88
GPC1P35052 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
GPC1P35052 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
GPC1P35052 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
GPC1P35052 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
GPC1P35052 AL161912.2-201ENST00000565707 3007 ntBASIC3.27□□□□□ -1.89
GPC1P35052 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
GPC1P35052 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.27□□□□□ -1.89
GPC1P35052 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
GPC1P35052 MIR30E-201ENST00000362104 92 ntBASIC3.27□□□□□ -1.89
GPC1P35052 RNU6-661P-201ENST00000362409 107 ntBASIC3.27□□□□□ -1.89
GPC1P35052 RNU6-862P-201ENST00000362804 105 ntBASIC3.27□□□□□ -1.89
GPC1P35052 RNU6-363P-201ENST00000362895 105 ntBASIC3.27□□□□□ -1.89
GPC1P35052 RNU6-1276P-201ENST00000365372 104 ntBASIC3.27□□□□□ -1.89
GPC1P35052 SNORA27-201ENST00000384323 126 ntBASIC3.27□□□□□ -1.89
GPC1P35052 SNORD38C-201ENST00000384381 69 ntBASIC3.27□□□□□ -1.89
GPC1P35052 RNA5SP482-201ENST00000391269 118 ntBASIC3.27□□□□□ -1.89
GPC1P35052 AC245047.3-201ENST00000429428 127 ntBASIC3.27□□□□□ -1.89
GPC1P35052 RN7SL442P-201ENST00000473804 320 ntBASIC3.27□□□□□ -1.89
GPC1P35052 IGHVII-40-1-201ENST00000517316 58 ntBASIC3.27□□□□□ -1.89
GPC1P35052 AC095038.3-201ENST00000634439 195 ntBASIC3.27□□□□□ -1.89
GPC1P35052 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
GPC1P35052 SNORA18-201ENST00000384416 132 ntBASIC3.26□□□□□ -1.89
GPC1P35052 RNU6-813P-201ENST00000384691 107 ntBASIC3.26□□□□□ -1.89
GPC1P35052 SNORA7.5-201ENST00000410672 110 ntBASIC3.26□□□□□ -1.89
GPC1P35052 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
GPC1P35052 CST2P1-201ENST00000425770 87 ntBASIC3.26□□□□□ -1.89
GPC1P35052 AC091826.1-201ENST00000514065 313 ntBASIC3.26□□□□□ -1.89
GPC1P35052 RNU1-95P-201ENST00000516357 160 ntBASIC3.26□□□□□ -1.89
GPC1P35052 RNU1-128P-201ENST00000516704 160 ntBASIC3.26□□□□□ -1.89
GPC1P35052 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC3.26□□□□□ -1.89
GPC1P35052 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
GPC1P35052 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.26□□□□□ -1.89
GPC1P35052 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
GPC1P35052 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
GPC1P35052 SNORA71.3-201ENST00000362582 128 ntBASIC3.25□□□□□ -1.89
GPC1P35052 SNORA25.6-201ENST00000364121 118 ntBASIC3.25□□□□□ -1.89
GPC1P35052 RNU6-163P-201ENST00000384396 106 ntBASIC3.25□□□□□ -1.89
GPC1P35052 RNU6-1072P-201ENST00000384703 107 ntBASIC3.25□□□□□ -1.89
GPC1P35052 RNU6-443P-201ENST00000384780 107 ntBASIC3.25□□□□□ -1.89
GPC1P35052 SRIP3-201ENST00000413200 219 ntBASIC3.25□□□□□ -1.89
GPC1P35052 AL606517.2-201ENST00000442855 241 ntBASIC3.25□□□□□ -1.89
GPC1P35052 RN7SL297P-201ENST00000483161 293 ntBASIC3.25□□□□□ -1.89
GPC1P35052 AC114811.1-201ENST00000507207 168 ntBASIC3.25□□□□□ -1.89
GPC1P35052 RNU6-1116P-201ENST00000517269 99 ntBASIC3.25□□□□□ -1.89
GPC1P35052 YPEL5P2-201ENST00000605553 359 ntBASIC3.25□□□□□ -1.89
GPC1P35052 uc_338.25-201ENST00000613756 156 ntBASIC3.25□□□□□ -1.89
GPC1P35052 AC021613.1-201ENST00000623880 111 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 311.1 ms