Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 Y_RNA.361-201ENST00000365515 120 ntBASIC1.74□□□□□ -2.13
HOXC8P31273 RNU6-662P-201ENST00000384253 104 ntBASIC1.74□□□□□ -2.13
HOXC8P31273 MIR934-201ENST00000401241 83 ntBASIC1.74□□□□□ -2.13
HOXC8P31273 MIR548H3-201ENST00000408771 118 ntBASIC1.74□□□□□ -2.13
HOXC8P31273 RN7SL274P-201ENST00000492268 272 ntBASIC1.74□□□□□ -2.13
HOXC8P31273 RNA5SP20-201ENST00000515976 84 ntBASIC1.74□□□□□ -2.13
HOXC8P31273 SNORD53B-201ENST00000577887 78 ntBASIC1.74□□□□□ -2.13
HOXC8P31273 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.74□□□□□ -2.13
HOXC8P31273 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.74□□□□□ -2.13
HOXC8P31273 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
HOXC8P31273 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.74□□□□□ -2.13
HOXC8P31273 snoU2-30.2-201ENST00000362805 70 ntBASIC1.73□□□□□ -2.13
HOXC8P31273 Y_RNA.117-201ENST00000363294 101 ntBASIC1.73□□□□□ -2.13
HOXC8P31273 Y_RNA.172-201ENST00000363765 102 ntBASIC1.73□□□□□ -2.13
HOXC8P31273 RNU6-379P-201ENST00000363813 104 ntBASIC1.73□□□□□ -2.13
HOXC8P31273 RNU1-42P-201ENST00000364033 160 ntBASIC1.73□□□□□ -2.13
HOXC8P31273 Y_RNA.416-201ENST00000384014 113 ntBASIC1.73□□□□□ -2.13
HOXC8P31273 Y_RNA.476-201ENST00000384347 108 ntBASIC1.73□□□□□ -2.13
HOXC8P31273 MIR515-2-201ENST00000384883 83 ntBASIC1.73□□□□□ -2.13
HOXC8P31273 MIR515-1-201ENST00000384884 83 ntBASIC1.73□□□□□ -2.13
HOXC8P31273 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.73□□□□□ -2.13
HOXC8P31273 MIR1267-201ENST00000408723 78 ntBASIC1.73□□□□□ -2.13
HOXC8P31273 RNU6-855P-201ENST00000410395 104 ntBASIC1.73□□□□□ -2.13
HOXC8P31273 AC024067.1-201ENST00000426199 223 ntBASIC1.73□□□□□ -2.13
HOXC8P31273 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.73□□□□□ -2.13
HOXC8P31273 AC099677.2-201ENST00000436385 175 ntBASIC1.73□□□□□ -2.13
HOXC8P31273 AL135790.2-201ENST00000437701 267 ntBASIC1.73□□□□□ -2.13
HOXC8P31273 SUMO1P2-201ENST00000452524 304 ntBASIC1.73□□□□□ -2.13
HOXC8P31273 snoU13.9-201ENST00000458927 103 ntBASIC1.73□□□□□ -2.13
HOXC8P31273 RPS26P55-201ENST00000471178 356 ntBASIC1.73□□□□□ -2.13
HOXC8P31273 SNORA70.12-201ENST00000516084 153 ntBASIC1.73□□□□□ -2.13
HOXC8P31273 RNU6-63P-201ENST00000516690 95 ntBASIC1.73□□□□□ -2.13
HOXC8P31273 AC084364.2-201ENST00000546924 395 ntBASIC1.73□□□□□ -2.13
HOXC8P31273 BX248123.2-201ENST00000606318 124 ntBASIC1.73□□□□□ -2.13
HOXC8P31273 AL353149.1-201ENST00000610667 244 ntBASIC1.73□□□□□ -2.13
HOXC8P31273 MIR338-201ENST00000636369 67 ntBASIC1.73□□□□□ -2.13
HOXC8P31273 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
HOXC8P31273 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
HOXC8P31273 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.72□□□□□ -2.13
HOXC8P31273 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.72□□□□□ -2.13
HOXC8P31273 SNORA33-201ENST00000363664 130 ntBASIC1.72□□□□□ -2.13
HOXC8P31273 RNU6-271P-201ENST00000363858 105 ntBASIC1.72□□□□□ -2.13
HOXC8P31273 RNU6-740P-201ENST00000364734 105 ntBASIC1.72□□□□□ -2.13
HOXC8P31273 SNORA20.1-201ENST00000364790 130 ntBASIC1.72□□□□□ -2.13
HOXC8P31273 Y_RNA.489-201ENST00000384410 101 ntBASIC1.72□□□□□ -2.13
HOXC8P31273 MIR517C-201ENST00000385103 95 ntBASIC1.72□□□□□ -2.13
HOXC8P31273 MT-TG-201ENST00000387429 68 ntBASIC1.72□□□□□ -2.13
HOXC8P31273 RNU6-360P-201ENST00000390944 104 ntBASIC1.72□□□□□ -2.13
HOXC8P31273 RNA5SP467-201ENST00000391274 118 ntBASIC1.72□□□□□ -2.13
HOXC8P31273 MIR1323-201ENST00000408090 73 ntBASIC1.72□□□□□ -2.13
HOXC8P31273 RNU6-1186P-201ENST00000410429 97 ntBASIC1.72□□□□□ -2.13
HOXC8P31273 RNU6-651P-201ENST00000411040 105 ntBASIC1.72□□□□□ -2.13
HOXC8P31273 HSPE1P9-201ENST00000440046 311 ntBASIC1.72□□□□□ -2.13
HOXC8P31273 TRMT112P2-201ENST00000512910 132 ntBASIC1.72□□□□□ -2.13
HOXC8P31273 RNU6-1023P-201ENST00000516137 106 ntBASIC1.72□□□□□ -2.13
HOXC8P31273 RNU6-1337P-201ENST00000516525 95 ntBASIC1.72□□□□□ -2.13
HOXC8P31273 SNORA27.4-201ENST00000516650 95 ntBASIC1.72□□□□□ -2.13
HOXC8P31273 AL137100.2-201ENST00000555786 315 ntBASIC1.72□□□□□ -2.13
HOXC8P31273 MIR4643-201ENST00000577473 78 ntBASIC1.72□□□□□ -2.13
HOXC8P31273 MIR4438-201ENST00000585271 93 ntBASIC1.72□□□□□ -2.13
HOXC8P31273 MIR8070-201ENST00000616510 88 ntBASIC1.72□□□□□ -2.13
HOXC8P31273 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.71□□□□□ -2.13
HOXC8P31273 Y_RNA.65-201ENST00000362846 100 ntBASIC1.71□□□□□ -2.14
HOXC8P31273 Y_RNA.275-201ENST00000364726 110 ntBASIC1.71□□□□□ -2.14
HOXC8P31273 RNU6-392P-201ENST00000364926 101 ntBASIC1.71□□□□□ -2.14
HOXC8P31273 Y_RNA.341-201ENST00000365341 102 ntBASIC1.71□□□□□ -2.14
HOXC8P31273 SNORD116-13-201ENST00000384408 92 ntBASIC1.71□□□□□ -2.14
HOXC8P31273 RNU6-1289P-201ENST00000384431 106 ntBASIC1.71□□□□□ -2.14
HOXC8P31273 RNU6-296P-201ENST00000384608 107 ntBASIC1.71□□□□□ -2.14
HOXC8P31273 RNA5SP323-201ENST00000391094 133 ntBASIC1.71□□□□□ -2.14
HOXC8P31273 RNU6-710P-201ENST00000410424 105 ntBASIC1.71□□□□□ -2.14
HOXC8P31273 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.71□□□□□ -2.14
HOXC8P31273 RNU6-388P-201ENST00000517012 105 ntBASIC1.71□□□□□ -2.14
HOXC8P31273 RNU6-389P-201ENST00000517048 105 ntBASIC1.71□□□□□ -2.14
HOXC8P31273 AC024614.2-201ENST00000577584 372 ntBASIC1.71□□□□□ -2.14
HOXC8P31273 MIR3671-201ENST00000580455 88 ntBASIC1.71□□□□□ -2.14
HOXC8P31273 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.71□□□□□ -2.14
HOXC8P31273 AC006435.5-201ENST00000624486 112 ntBASIC1.71□□□□□ -2.14
HOXC8P31273 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.71□□□□□ -2.14
HOXC8P31273 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.7□□□□□ -2.14
HOXC8P31273 MIR424-201ENST00000362227 98 ntBASIC1.7□□□□□ -2.14
HOXC8P31273 Y_RNA.20-201ENST00000362479 113 ntBASIC1.7□□□□□ -2.14
HOXC8P31273 RNU1-22P-201ENST00000363334 158 ntBASIC1.7□□□□□ -2.14
HOXC8P31273 RNU6-1048P-201ENST00000364054 107 ntBASIC1.7□□□□□ -2.14
HOXC8P31273 RNU6-439P-201ENST00000384188 106 ntBASIC1.7□□□□□ -2.14
HOXC8P31273 Y_RNA.539-201ENST00000384635 107 ntBASIC1.7□□□□□ -2.14
HOXC8P31273 RNU6-136P-201ENST00000384663 107 ntBASIC1.7□□□□□ -2.14
HOXC8P31273 RNU6-1248P-201ENST00000391096 64 ntBASIC1.7□□□□□ -2.14
HOXC8P31273 AL117342.1-201ENST00000404861 406 ntBASIC1.7□□□□□ -2.14
HOXC8P31273 AC097462.1-201ENST00000514125 324 ntBASIC1.7□□□□□ -2.14
HOXC8P31273 RNU7-172P-201ENST00000517125 64 ntBASIC1.7□□□□□ -2.14
HOXC8P31273 RNU6-111P-201ENST00000517179 105 ntBASIC1.7□□□□□ -2.14
HOXC8P31273 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
HOXC8P31273 AC005357.1-201ENST00000588399 301 ntBASIC1.7□□□□□ -2.14
HOXC8P31273 AC090425.1-201ENST00000610007 140 ntBASIC1.7□□□□□ -2.14
HOXC8P31273 U6.73-201ENST00000619194 103 ntBASIC1.7□□□□□ -2.14
HOXC8P31273 AC078938.1-201ENST00000620993 318 ntBASIC1.7□□□□□ -2.14
HOXC8P31273 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.7□□□□□ -2.14
HOXC8P31273 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
HOXC8P31273 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 179.5 ms