Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 AC011604.1-201ENST00000545978 196 ntBASIC2.38□□□□□ -2.03
CNGA1P29973 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.38□□□□□ -2.03
CNGA1P29973 MIR3128-201ENST00000581957 66 ntBASIC2.38□□□□□ -2.03
CNGA1P29973 MIR4713-201ENST00000582691 75 ntBASIC2.38□□□□□ -2.03
CNGA1P29973 AP000942.4-201ENST00000604811 241 ntBASIC2.38□□□□□ -2.03
CNGA1P29973 AC013791.1-201ENST00000616619 62 ntBASIC2.38□□□□□ -2.03
CNGA1P29973 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.38□□□□□ -2.03
CNGA1P29973 AC134026.1-201ENST00000623249 2239 ntBASIC2.38□□□□□ -2.03
CNGA1P29973 AC092881.1-201ENST00000638218 2733 ntBASIC2.37□□□□□ -2.03
CNGA1P29973 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
CNGA1P29973 Y_RNA.277-201ENST00000364754 102 ntBASIC2.37□□□□□ -2.03
CNGA1P29973 RNU6-950P-201ENST00000384651 107 ntBASIC2.37□□□□□ -2.03
CNGA1P29973 MTCO2P33-201ENST00000402100 465 ntBASIC2.37□□□□□ -2.03
CNGA1P29973 HMGN2P38-201ENST00000423806 265 ntBASIC2.37□□□□□ -2.03
CNGA1P29973 RNA5SP233-201ENST00000459153 113 ntBASIC2.37□□□□□ -2.03
CNGA1P29973 snoU13.27-201ENST00000459278 104 ntBASIC2.37□□□□□ -2.03
CNGA1P29973 RPS27P21-201ENST00000486977 252 ntBASIC2.37□□□□□ -2.03
CNGA1P29973 RNU6-1023P-201ENST00000516137 106 ntBASIC2.37□□□□□ -2.03
CNGA1P29973 MIR4643-201ENST00000577473 78 ntBASIC2.37□□□□□ -2.03
CNGA1P29973 MIR4282-201ENST00000583613 67 ntBASIC2.37□□□□□ -2.03
CNGA1P29973 Y_RNA.783-201ENST00000613546 102 ntBASIC2.37□□□□□ -2.03
CNGA1P29973 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CNGA1P29973 Y_RNA.54-201ENST00000362766 105 ntBASIC2.36□□□□□ -2.03
CNGA1P29973 RNU4-52P-201ENST00000384209 138 ntBASIC2.36□□□□□ -2.03
CNGA1P29973 Y_RNA.477-201ENST00000384352 108 ntBASIC2.36□□□□□ -2.03
CNGA1P29973 RNU6-440P-201ENST00000390882 105 ntBASIC2.36□□□□□ -2.03
CNGA1P29973 SNORD58.1-201ENST00000391313 66 ntBASIC2.36□□□□□ -2.03
CNGA1P29973 RNU6-651P-201ENST00000411040 105 ntBASIC2.36□□□□□ -2.03
CNGA1P29973 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.36□□□□□ -2.03
CNGA1P29973 AC104435.1-201ENST00000483483 166 ntBASIC2.36□□□□□ -2.03
CNGA1P29973 AC005357.1-201ENST00000588399 301 ntBASIC2.36□□□□□ -2.03
CNGA1P29973 BX284668.6-201ENST00000606899 438 ntBASIC2.36□□□□□ -2.03
CNGA1P29973 AP000553.5-201ENST00000641933 54 ntBASIC2.36□□□□□ -2.03
CNGA1P29973 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CNGA1P29973 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
CNGA1P29973 Y_RNA.60-201ENST00000362831 98 ntBASIC2.35□□□□□ -2.03
CNGA1P29973 RNU6-211P-201ENST00000384047 107 ntBASIC2.35□□□□□ -2.03
CNGA1P29973 MT-TG-201ENST00000387429 68 ntBASIC2.35□□□□□ -2.03
CNGA1P29973 RNU6-360P-201ENST00000390944 104 ntBASIC2.35□□□□□ -2.03
CNGA1P29973 RNU2-2P-201ENST00000410396 191 ntBASIC2.35□□□□□ -2.03
CNGA1P29973 AC233266.1-201ENST00000454518 96 ntBASIC2.35□□□□□ -2.03
CNGA1P29973 RNU2-56P-201ENST00000516826 190 ntBASIC2.35□□□□□ -2.03
CNGA1P29973 MIR5692C2-201ENST00000577959 77 ntBASIC2.35□□□□□ -2.03
CNGA1P29973 AL929325.1-201ENST00000603096 117 ntBASIC2.35□□□□□ -2.03
CNGA1P29973 AL627230.6-201ENST00000611129 280 ntBASIC2.35□□□□□ -2.03
CNGA1P29973 AC242852.1-201ENST00000612151 96 ntBASIC2.35□□□□□ -2.03
CNGA1P29973 AC244015.1-201ENST00000622301 99 ntBASIC2.35□□□□□ -2.03
CNGA1P29973 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
CNGA1P29973 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CNGA1P29973 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
CNGA1P29973 Y_RNA.122-201ENST00000363331 96 ntBASIC2.34□□□□□ -2.03
CNGA1P29973 RNU6-1080P-201ENST00000383982 107 ntBASIC2.34□□□□□ -2.03
CNGA1P29973 Y_RNA.539-201ENST00000384635 107 ntBASIC2.34□□□□□ -2.03
CNGA1P29973 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
CNGA1P29973 SNORA12.1-201ENST00000390873 148 ntBASIC2.34□□□□□ -2.03
CNGA1P29973 SNORA36B-201ENST00000410438 131 ntBASIC2.34□□□□□ -2.03
CNGA1P29973 RN7SKP200-201ENST00000410564 320 ntBASIC2.34□□□□□ -2.03
CNGA1P29973 AL445685.2-201ENST00000422551 342 ntBASIC2.34□□□□□ -2.03
CNGA1P29973 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.34□□□□□ -2.03
CNGA1P29973 RPL23AP54-201ENST00000495129 419 ntBASIC2.34□□□□□ -2.03
CNGA1P29973 MIR5002-201ENST00000584713 97 ntBASIC2.34□□□□□ -2.03
CNGA1P29973 AC068700.1-201ENST00000565862 3754 ntBASIC2.34□□□□□ -2.04
CNGA1P29973 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
CNGA1P29973 Y_RNA.188-201ENST00000363952 111 ntBASIC2.33□□□□□ -2.04
CNGA1P29973 SNORD27-201ENST00000363981 72 ntBASIC2.33□□□□□ -2.04
CNGA1P29973 Y_RNA.590-201ENST00000410140 107 ntBASIC2.33□□□□□ -2.04
CNGA1P29973 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.33□□□□□ -2.04
CNGA1P29973 COX6CP10-201ENST00000416832 224 ntBASIC2.33□□□□□ -2.04
CNGA1P29973 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.33□□□□□ -2.04
CNGA1P29973 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.33□□□□□ -2.04
CNGA1P29973 RNU6-1053P-201ENST00000515930 101 ntBASIC2.33□□□□□ -2.04
CNGA1P29973 RNU7-28P-201ENST00000516759 62 ntBASIC2.33□□□□□ -2.04
CNGA1P29973 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.33□□□□□ -2.04
CNGA1P29973 MIR4709-201ENST00000577272 72 ntBASIC2.33□□□□□ -2.04
CNGA1P29973 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.33□□□□□ -2.04
CNGA1P29973 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.33□□□□□ -2.04
CNGA1P29973 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CNGA1P29973 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CNGA1P29973 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
CNGA1P29973 RNU6-661P-201ENST00000362409 107 ntBASIC2.32□□□□□ -2.04
CNGA1P29973 RNU6-674P-201ENST00000363831 107 ntBASIC2.32□□□□□ -2.04
CNGA1P29973 RNU6-144P-201ENST00000383951 107 ntBASIC2.32□□□□□ -2.04
CNGA1P29973 RNU6-1031P-201ENST00000384773 107 ntBASIC2.32□□□□□ -2.04
CNGA1P29973 RNU6-437P-201ENST00000459408 95 ntBASIC2.32□□□□□ -2.04
CNGA1P29973 AL049830.1-201ENST00000468034 425 ntBASIC2.32□□□□□ -2.04
CNGA1P29973 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.32□□□□□ -2.04
CNGA1P29973 AC073349.3-201ENST00000617616 186 ntBASIC2.32□□□□□ -2.04
CNGA1P29973 Y_RNA.76-201ENST00000362931 109 ntBASIC2.31□□□□□ -2.04
CNGA1P29973 RNU6-1205P-201ENST00000363625 106 ntBASIC2.31□□□□□ -2.04
CNGA1P29973 Y_RNA.621-201ENST00000411065 96 ntBASIC2.31□□□□□ -2.04
CNGA1P29973 AC108667.1-201ENST00000428618 249 ntBASIC2.31□□□□□ -2.04
CNGA1P29973 STAG3L5P-204ENST00000443759 179 ntBASIC2.31□□□□□ -2.04
CNGA1P29973 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.31□□□□□ -2.04
CNGA1P29973 RNU6-1271P-201ENST00000517049 105 ntBASIC2.31□□□□□ -2.04
CNGA1P29973 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.31□□□□□ -2.04
CNGA1P29973 AC110588.1-201ENST00000559699 137 ntBASIC2.31□□□□□ -2.04
CNGA1P29973 AC002984.1-201ENST00000591692 448 ntBASIC2.31□□□□□ -2.04
CNGA1P29973 SNORA28-201ENST00000606769 126 ntBASIC2.31□□□□□ -2.04
CNGA1P29973 Y_RNA.203-201ENST00000364106 102 ntBASIC2.3□□□□□ -2.04
CNGA1P29973 SNORA20.1-201ENST00000364790 130 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 223.2 ms