Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.13□□□□□ -1.91
NID1P14543 RNU6-795P-201ENST00000516323 103 ntBASIC3.13□□□□□ -1.91
NID1P14543 RNU1-142P-201ENST00000516682 145 ntBASIC3.13□□□□□ -1.91
NID1P14543 SCARNA11.3-201ENST00000517276 130 ntBASIC3.13□□□□□ -1.91
NID1P14543 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.13□□□□□ -1.91
NID1P14543 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
NID1P14543 AC012531.4-201ENST00000616509 177 ntBASIC3.13□□□□□ -1.91
NID1P14543 FAS-AS1.2-201ENST00000620386 170 ntBASIC3.13□□□□□ -1.91
NID1P14543 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
NID1P14543 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
NID1P14543 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
NID1P14543 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
NID1P14543 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.12□□□□□ -1.91
NID1P14543 MIR340-201ENST00000362125 95 ntBASIC3.12□□□□□ -1.91
NID1P14543 RNU6-661P-201ENST00000362409 107 ntBASIC3.12□□□□□ -1.91
NID1P14543 RNU6-832P-201ENST00000363319 107 ntBASIC3.12□□□□□ -1.91
NID1P14543 RNU4-16P-201ENST00000364737 141 ntBASIC3.12□□□□□ -1.91
NID1P14543 RNU6-1296P-201ENST00000383879 107 ntBASIC3.12□□□□□ -1.91
NID1P14543 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
NID1P14543 AL451046.2-201ENST00000403074 277 ntBASIC3.12□□□□□ -1.91
NID1P14543 RNU6-733P-201ENST00000410759 104 ntBASIC3.12□□□□□ -1.91
NID1P14543 AL353689.1-201ENST00000438895 199 ntBASIC3.12□□□□□ -1.91
NID1P14543 AC087499.4-201ENST00000448505 178 ntBASIC3.12□□□□□ -1.91
NID1P14543 RN7SL601P-201ENST00000471221 293 ntBASIC3.12□□□□□ -1.91
NID1P14543 AL049873.1-201ENST00000480540 376 ntBASIC3.12□□□□□ -1.91
NID1P14543 MIR3618-201ENST00000580330 88 ntBASIC3.12□□□□□ -1.91
NID1P14543 AC087741.2-201ENST00000619415 172 ntBASIC3.12□□□□□ -1.91
NID1P14543 SCARNA15.3-201ENST00000626315 122 ntBASIC3.12□□□□□ -1.91
NID1P14543 SCARNA4.1-201ENST00000628597 123 ntBASIC3.12□□□□□ -1.91
NID1P14543 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
NID1P14543 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
NID1P14543 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
NID1P14543 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
NID1P14543 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.12□□□□□ -1.91
NID1P14543 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
NID1P14543 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
NID1P14543 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
NID1P14543 Y_RNA.96-201ENST00000363092 109 ntBASIC3.11□□□□□ -1.91
NID1P14543 RNU1-33P-201ENST00000364249 162 ntBASIC3.11□□□□□ -1.91
NID1P14543 RNU6-409P-201ENST00000384114 104 ntBASIC3.11□□□□□ -1.91
NID1P14543 MIR577-201ENST00000385196 96 ntBASIC3.11□□□□□ -1.91
NID1P14543 SNRPGP14-201ENST00000435400 219 ntBASIC3.11□□□□□ -1.91
NID1P14543 AC107083.1-201ENST00000439643 279 ntBASIC3.11□□□□□ -1.91
NID1P14543 RNU7-94P-201ENST00000459576 63 ntBASIC3.11□□□□□ -1.91
NID1P14543 RNU6-1041P-201ENST00000516254 102 ntBASIC3.11□□□□□ -1.91
NID1P14543 IGHVII-40-1-201ENST00000517316 58 ntBASIC3.11□□□□□ -1.91
NID1P14543 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.11□□□□□ -1.91
NID1P14543 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.11□□□□□ -1.91
NID1P14543 MIR4762-201ENST00000585261 75 ntBASIC3.11□□□□□ -1.91
NID1P14543 AC078899.2-201ENST00000595282 212 ntBASIC3.11□□□□□ -1.91
NID1P14543 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.11□□□□□ -1.91
NID1P14543 MIR5739-201ENST00000619803 80 ntBASIC3.11□□□□□ -1.91
NID1P14543 UCA1.1-201ENST00000620952 75 ntBASIC3.11□□□□□ -1.91
NID1P14543 MIR338-201ENST00000636369 67 ntBASIC3.11□□□□□ -1.91
NID1P14543 U6.108-201ENST00000637764 58 ntBASIC3.11□□□□□ -1.91
NID1P14543 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NID1P14543 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NID1P14543 AC008264.2-201ENST00000610193 3731 ntBASIC3.11□□□□□ -1.91
NID1P14543 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
NID1P14543 RNU4-35P-201ENST00000362588 141 ntBASIC3.1□□□□□ -1.91
NID1P14543 RNU6-363P-201ENST00000362895 105 ntBASIC3.1□□□□□ -1.91
NID1P14543 SNORD115-19-201ENST00000363098 82 ntBASIC3.1□□□□□ -1.91
NID1P14543 SNORD115-18-201ENST00000363293 82 ntBASIC3.1□□□□□ -1.91
NID1P14543 SNORD115-17-201ENST00000364612 82 ntBASIC3.1□□□□□ -1.91
NID1P14543 Y_RNA.360-201ENST00000365512 102 ntBASIC3.1□□□□□ -1.91
NID1P14543 RNU6-675P-201ENST00000384236 104 ntBASIC3.1□□□□□ -1.91
NID1P14543 MIR218-1-201ENST00000384999 110 ntBASIC3.1□□□□□ -1.91
NID1P14543 RNA5SP323-201ENST00000391094 133 ntBASIC3.1□□□□□ -1.91
NID1P14543 RNU6-279P-201ENST00000391297 101 ntBASIC3.1□□□□□ -1.91
NID1P14543 RPL21P3-201ENST00000395517 478 ntBASIC3.1□□□□□ -1.91
NID1P14543 AL627390.1-201ENST00000396055 340 ntBASIC3.1□□□□□ -1.91
NID1P14543 MRPL35P3-201ENST00000421557 364 ntBASIC3.1□□□□□ -1.91
NID1P14543 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.1□□□□□ -1.91
NID1P14543 AC025518.1-201ENST00000479856 347 ntBASIC3.1□□□□□ -1.91
NID1P14543 CKS1BP2-201ENST00000497342 240 ntBASIC3.1□□□□□ -1.91
NID1P14543 IGKV2-26-201ENST00000518305 343 ntBASIC3.1□□□□□ -1.91
NID1P14543 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.1□□□□□ -1.91
NID1P14543 HSPE1P19-201ENST00000603327 295 ntBASIC3.1□□□□□ -1.91
NID1P14543 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.1□□□□□ -1.91
NID1P14543 SNORA50A-202ENST00000629536 136 ntBASIC3.1□□□□□ -1.91
NID1P14543 MIR203B-201ENST00000636080 86 ntBASIC3.1□□□□□ -1.91
NID1P14543 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.1□□□□□ -1.91
NID1P14543 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.1□□□□□ -1.91
NID1P14543 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NID1P14543 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.1□□□□□ -1.91
NID1P14543 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.1□□□□□ -1.91
NID1P14543 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
NID1P14543 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
NID1P14543 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
NID1P14543 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
NID1P14543 U8.5-201ENST00000364528 136 ntBASIC3.09□□□□□ -1.91
NID1P14543 RNU4-67P-201ENST00000364569 141 ntBASIC3.09□□□□□ -1.91
NID1P14543 Y_RNA.336-201ENST00000365307 109 ntBASIC3.09□□□□□ -1.91
NID1P14543 FO393413.1-201ENST00000402892 195 ntBASIC3.09□□□□□ -1.91
NID1P14543 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.09□□□□□ -1.91
NID1P14543 RN7SKP200-201ENST00000410564 320 ntBASIC3.09□□□□□ -1.91
NID1P14543 SNX2P2-201ENST00000424553 323 ntBASIC3.09□□□□□ -1.91
NID1P14543 HMGN1P18-201ENST00000457642 277 ntBASIC3.09□□□□□ -1.91
NID1P14543 RPS23P4-201ENST00000487908 423 ntBASIC3.09□□□□□ -1.91
NID1P14543 RNU6-521P-201ENST00000516663 105 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms