Protein–RNA interactions for Protein: P12814

ACTN1, Alpha-actinin-1, humanhuman

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1P12814 AL034345.1-201ENST00000407768 123 ntBASIC1.6□□□□□ -2.15
ACTN1P12814 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.6□□□□□ -2.15
ACTN1P12814 RNY3P15-201ENST00000516297 97 ntBASIC1.6□□□□□ -2.15
ACTN1P12814 SNORA40.15-201ENST00000516884 107 ntBASIC1.6□□□□□ -2.15
ACTN1P12814 RNU6-341P-201ENST00000516973 96 ntBASIC1.6□□□□□ -2.15
ACTN1P12814 AC113195.1-201ENST00000579952 141 ntBASIC1.6□□□□□ -2.15
ACTN1P12814 MIR4300-201ENST00000581016 96 ntBASIC1.6□□□□□ -2.15
ACTN1P12814 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.6□□□□□ -2.15
ACTN1P12814 SNORD114-7-201ENST00000362520 77 ntBASIC1.59□□□□□ -2.15
ACTN1P12814 RNA5SP259-201ENST00000365541 109 ntBASIC1.59□□□□□ -2.15
ACTN1P12814 RNU6-1080P-201ENST00000383982 107 ntBASIC1.59□□□□□ -2.15
ACTN1P12814 RNU11-5P-201ENST00000391216 129 ntBASIC1.59□□□□□ -2.15
ACTN1P12814 RPS4XP11-201ENST00000446897 772 ntBASIC1.59□□□□□ -2.15
ACTN1P12814 HSPE1P13-201ENST00000451143 297 ntBASIC1.59□□□□□ -2.15
ACTN1P12814 RNA5SP61-201ENST00000516453 100 ntBASIC1.59□□□□□ -2.15
ACTN1P12814 SUMO2P16-201ENST00000519475 264 ntBASIC1.59□□□□□ -2.15
ACTN1P12814 AP003072.1-201ENST00000531740 145 ntBASIC1.59□□□□□ -2.15
ACTN1P12814 AC004832.4-201ENST00000608952 331 ntBASIC1.59□□□□□ -2.15
ACTN1P12814 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
ACTN1P12814 Y_RNA.183-201ENST00000363882 113 ntBASIC1.58□□□□□ -2.16
ACTN1P12814 RNU6-694P-201ENST00000364071 147 ntBASIC1.58□□□□□ -2.16
ACTN1P12814 AC117470.1-201ENST00000381974 330 ntBASIC1.58□□□□□ -2.16
ACTN1P12814 Y_RNA.383-201ENST00000383855 97 ntBASIC1.58□□□□□ -2.16
ACTN1P12814 MIR520G-201ENST00000385064 90 ntBASIC1.58□□□□□ -2.16
ACTN1P12814 MIR513A1-201ENST00000385138 129 ntBASIC1.58□□□□□ -2.16
ACTN1P12814 AL162725.1-201ENST00000435405 301 ntBASIC1.58□□□□□ -2.16
ACTN1P12814 POLR2KP2-201ENST00000438155 177 ntBASIC1.58□□□□□ -2.16
ACTN1P12814 SEPT14P8-201ENST00000508026 178 ntBASIC1.58□□□□□ -2.16
ACTN1P12814 MIR4778-201ENST00000577635 80 ntBASIC1.58□□□□□ -2.16
ACTN1P12814 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
ACTN1P12814 RNU4-80P-201ENST00000363200 141 ntBASIC1.57□□□□□ -2.16
ACTN1P12814 RNU6-806P-201ENST00000365147 105 ntBASIC1.57□□□□□ -2.16
ACTN1P12814 RNU6-639P-201ENST00000384074 107 ntBASIC1.57□□□□□ -2.16
ACTN1P12814 MIR194-1-201ENST00000384892 85 ntBASIC1.57□□□□□ -2.16
ACTN1P12814 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
ACTN1P12814 RNU6-121P-201ENST00000410525 99 ntBASIC1.57□□□□□ -2.16
ACTN1P12814 RN7SKP51-201ENST00000410781 304 ntBASIC1.57□□□□□ -2.16
ACTN1P12814 AL161935.2-201ENST00000414627 60 ntBASIC1.57□□□□□ -2.16
ACTN1P12814 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.57□□□□□ -2.16
ACTN1P12814 ELOCP20-201ENST00000422460 345 ntBASIC1.57□□□□□ -2.16
ACTN1P12814 CALM2P4-201ENST00000430810 426 ntBASIC1.57□□□□□ -2.16
ACTN1P12814 SNRPGP13-201ENST00000442212 177 ntBASIC1.57□□□□□ -2.16
ACTN1P12814 PGBD4P5-201ENST00000445958 426 ntBASIC1.57□□□□□ -2.16
ACTN1P12814 RPS20P10-201ENST00000451209 253 ntBASIC1.57□□□□□ -2.16
ACTN1P12814 AC098869.1-201ENST00000481627 292 ntBASIC1.57□□□□□ -2.16
ACTN1P12814 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.57□□□□□ -2.16
ACTN1P12814 RNU6-764P-201ENST00000516396 105 ntBASIC1.57□□□□□ -2.16
ACTN1P12814 AP002004.2-201ENST00000531656 154 ntBASIC1.57□□□□□ -2.16
ACTN1P12814 AC136443.5-201ENST00000603741 370 ntBASIC1.57□□□□□ -2.16
ACTN1P12814 SNORD113-5-201ENST00000607261 78 ntBASIC1.57□□□□□ -2.16
ACTN1P12814 AC106754.2-201ENST00000623006 233 ntBASIC1.57□□□□□ -2.16
ACTN1P12814 AC068647.2-201ENST00000637380 353 ntBASIC1.57□□□□□ -2.16
ACTN1P12814 Y_RNA.26-201ENST00000362539 101 ntBASIC1.56□□□□□ -2.16
ACTN1P12814 U8.1-201ENST00000362843 134 ntBASIC1.56□□□□□ -2.16
ACTN1P12814 Y_RNA.153-201ENST00000363615 91 ntBASIC1.56□□□□□ -2.16
ACTN1P12814 Y_RNA.341-201ENST00000365341 102 ntBASIC1.56□□□□□ -2.16
ACTN1P12814 SNORD114-22-201ENST00000365423 72 ntBASIC1.56□□□□□ -2.16
ACTN1P12814 Y_RNA.380-201ENST00000365663 111 ntBASIC1.56□□□□□ -2.16
ACTN1P12814 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.56□□□□□ -2.16
ACTN1P12814 AC113618.1-201ENST00000416747 285 ntBASIC1.56□□□□□ -2.16
ACTN1P12814 AL049830.1-201ENST00000468034 425 ntBASIC1.56□□□□□ -2.16
ACTN1P12814 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.56□□□□□ -2.16
ACTN1P12814 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.56□□□□□ -2.16
ACTN1P12814 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.56□□□□□ -2.16
ACTN1P12814 SNORA28-201ENST00000606769 126 ntBASIC1.56□□□□□ -2.16
ACTN1P12814 RMST_2.1-201ENST00000617263 136 ntBASIC1.56□□□□□ -2.16
ACTN1P12814 SNORD3E-202ENST00000627253 216 ntBASIC1.56□□□□□ -2.16
ACTN1P12814 AL161722.3-201ENST00000605789 2983 ntBASIC1.55□□□□□ -2.16
ACTN1P12814 Y_RNA.19-201ENST00000362462 99 ntBASIC1.55□□□□□ -2.16
ACTN1P12814 Y_RNA.214-201ENST00000364201 112 ntBASIC1.55□□□□□ -2.16
ACTN1P12814 RNU4-76P-201ENST00000364509 141 ntBASIC1.55□□□□□ -2.16
ACTN1P12814 RNU6-53P-201ENST00000365367 106 ntBASIC1.55□□□□□ -2.16
ACTN1P12814 RNU6-710P-201ENST00000410424 105 ntBASIC1.55□□□□□ -2.16
ACTN1P12814 RNU6-955P-201ENST00000410497 104 ntBASIC1.55□□□□□ -2.16
ACTN1P12814 RNA5SP168-201ENST00000516642 112 ntBASIC1.55□□□□□ -2.16
ACTN1P12814 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.55□□□□□ -2.16
ACTN1P12814 AC011604.1-201ENST00000545978 196 ntBASIC1.55□□□□□ -2.16
ACTN1P12814 AC015688.6-201ENST00000577737 104 ntBASIC1.55□□□□□ -2.16
ACTN1P12814 MIR4422-201ENST00000581938 83 ntBASIC1.55□□□□□ -2.16
ACTN1P12814 AC073349.3-201ENST00000617616 186 ntBASIC1.55□□□□□ -2.16
ACTN1P12814 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
ACTN1P12814 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
ACTN1P12814 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.54□□□□□ -2.16
ACTN1P12814 Y_RNA.64-201ENST00000362845 102 ntBASIC1.54□□□□□ -2.16
ACTN1P12814 SNORD68-201ENST00000363214 84 ntBASIC1.54□□□□□ -2.16
ACTN1P12814 RNU4-41P-201ENST00000364426 143 ntBASIC1.54□□□□□ -2.16
ACTN1P12814 SNORD1A-201ENST00000364968 72 ntBASIC1.54□□□□□ -2.16
ACTN1P12814 MIR215-201ENST00000384858 110 ntBASIC1.54□□□□□ -2.16
ACTN1P12814 MIR562-201ENST00000384894 95 ntBASIC1.54□□□□□ -2.16
ACTN1P12814 MIR613-201ENST00000385248 95 ntBASIC1.54□□□□□ -2.16
ACTN1P12814 SNORD115-46-201ENST00000390982 71 ntBASIC1.54□□□□□ -2.16
ACTN1P12814 RNU1-78P-201ENST00000391248 165 ntBASIC1.54□□□□□ -2.16
ACTN1P12814 U8.16-201ENST00000391279 133 ntBASIC1.54□□□□□ -2.16
ACTN1P12814 RPL21P38-201ENST00000418090 167 ntBASIC1.54□□□□□ -2.16
ACTN1P12814 AC024067.1-201ENST00000426199 223 ntBASIC1.54□□□□□ -2.16
ACTN1P12814 AL135790.2-201ENST00000437701 267 ntBASIC1.54□□□□□ -2.16
ACTN1P12814 AC093850.1-201ENST00000454121 251 ntBASIC1.54□□□□□ -2.16
ACTN1P12814 HSPE1P25-201ENST00000455484 251 ntBASIC1.54□□□□□ -2.16
ACTN1P12814 LINC01399-202ENST00000458450 244 ntBASIC1.54□□□□□ -2.16
ACTN1P12814 OR9P1P-201ENST00000496431 281 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms