Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC006435.5-201ENST00000624486 112 ntBASIC3.75□□□□□ -1.81
CSB-PGBD3P0DP91 AL596211.1-201ENST00000569873 2277 ntBASIC3.75□□□□□ -1.81
CSB-PGBD3P0DP91 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CSB-PGBD3P0DP91 RNU6-1138P-201ENST00000365359 106 ntBASIC3.74□□□□□ -1.81
CSB-PGBD3P0DP91 SNORA25B-201ENST00000365507 128 ntBASIC3.74□□□□□ -1.81
CSB-PGBD3P0DP91 AC092427.1-202ENST00000430569 476 ntBASIC3.74□□□□□ -1.81
CSB-PGBD3P0DP91 RN7SL633P-201ENST00000488974 297 ntBASIC3.74□□□□□ -1.81
CSB-PGBD3P0DP91 MIR3129-201ENST00000581095 76 ntBASIC3.74□□□□□ -1.81
CSB-PGBD3P0DP91 MIR2681-201ENST00000581814 105 ntBASIC3.74□□□□□ -1.81
CSB-PGBD3P0DP91 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
CSB-PGBD3P0DP91 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.73□□□□□ -1.81
CSB-PGBD3P0DP91 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.73□□□□□ -1.81
CSB-PGBD3P0DP91 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
CSB-PGBD3P0DP91 SNORA51.5-201ENST00000384126 131 ntBASIC3.73□□□□□ -1.81
CSB-PGBD3P0DP91 MIR9-1-201ENST00000385198 89 ntBASIC3.73□□□□□ -1.81
CSB-PGBD3P0DP91 MIR887-201ENST00000401258 79 ntBASIC3.73□□□□□ -1.81
CSB-PGBD3P0DP91 AC023449.1-201ENST00000454464 154 ntBASIC3.73□□□□□ -1.81
CSB-PGBD3P0DP91 RPS27P22-201ENST00000478056 241 ntBASIC3.73□□□□□ -1.81
CSB-PGBD3P0DP91 AC104027.1-201ENST00000521887 300 ntBASIC3.73□□□□□ -1.81
CSB-PGBD3P0DP91 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.73□□□□□ -1.81
CSB-PGBD3P0DP91 MIR6817-201ENST00000615588 66 ntBASIC3.73□□□□□ -1.81
CSB-PGBD3P0DP91 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CSB-PGBD3P0DP91 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CSB-PGBD3P0DP91 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.73□□□□□ -1.81
CSB-PGBD3P0DP91 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CSB-PGBD3P0DP91 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CSB-PGBD3P0DP91 RNA5SP68-201ENST00000363885 119 ntBASIC3.72□□□□□ -1.81
CSB-PGBD3P0DP91 SNORA26-201ENST00000391286 122 ntBASIC3.72□□□□□ -1.81
CSB-PGBD3P0DP91 MTATP6P21-201ENST00000440681 189 ntBASIC3.72□□□□□ -1.81
CSB-PGBD3P0DP91 OR9P1P-201ENST00000496431 281 ntBASIC3.72□□□□□ -1.81
CSB-PGBD3P0DP91 SNORA64.4-201ENST00000516632 81 ntBASIC3.72□□□□□ -1.81
CSB-PGBD3P0DP91 RNU6-856P-201ENST00000516959 98 ntBASIC3.72□□□□□ -1.81
CSB-PGBD3P0DP91 RNU6-365P-201ENST00000517113 106 ntBASIC3.72□□□□□ -1.81
CSB-PGBD3P0DP91 AL035470.1-201ENST00000622571 220 ntBASIC3.72□□□□□ -1.81
CSB-PGBD3P0DP91 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.72□□□□□ -1.81
CSB-PGBD3P0DP91 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
CSB-PGBD3P0DP91 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.72□□□□□ -1.81
CSB-PGBD3P0DP91 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.72□□□□□ -1.81
CSB-PGBD3P0DP91 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CSB-PGBD3P0DP91 MIR340-201ENST00000362125 95 ntBASIC3.71□□□□□ -1.82
CSB-PGBD3P0DP91 RNU1-22P-201ENST00000363334 158 ntBASIC3.71□□□□□ -1.82
CSB-PGBD3P0DP91 MIR570-201ENST00000384917 97 ntBASIC3.71□□□□□ -1.82
CSB-PGBD3P0DP91 RNA5SP21-201ENST00000410917 96 ntBASIC3.71□□□□□ -1.82
CSB-PGBD3P0DP91 AC009238.1-201ENST00000442165 424 ntBASIC3.71□□□□□ -1.82
CSB-PGBD3P0DP91 AC104389.3-201ENST00000445629 235 ntBASIC3.71□□□□□ -1.82
CSB-PGBD3P0DP91 AC009237.6-201ENST00000446969 424 ntBASIC3.71□□□□□ -1.82
CSB-PGBD3P0DP91 AC011604.1-201ENST00000545978 196 ntBASIC3.71□□□□□ -1.82
CSB-PGBD3P0DP91 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.71□□□□□ -1.82
CSB-PGBD3P0DP91 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.71□□□□□ -1.82
CSB-PGBD3P0DP91 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.71□□□□□ -1.82
CSB-PGBD3P0DP91 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
CSB-PGBD3P0DP91 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
CSB-PGBD3P0DP91 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
CSB-PGBD3P0DP91 MIR488-201ENST00000365739 83 ntBASIC3.7□□□□□ -1.82
CSB-PGBD3P0DP91 SNORA70B-201ENST00000384210 135 ntBASIC3.7□□□□□ -1.82
CSB-PGBD3P0DP91 AL590004.2-201ENST00000404787 371 ntBASIC3.7□□□□□ -1.82
CSB-PGBD3P0DP91 RNA5SP148-201ENST00000516527 94 ntBASIC3.7□□□□□ -1.82
CSB-PGBD3P0DP91 U4atac.1-201ENST00000618345 95 ntBASIC3.7□□□□□ -1.82
CSB-PGBD3P0DP91 AL590808.1-201ENST00000618696 141 ntBASIC3.7□□□□□ -1.82
CSB-PGBD3P0DP91 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CSB-PGBD3P0DP91 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CSB-PGBD3P0DP91 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CSB-PGBD3P0DP91 SNORD56.3-201ENST00000363507 71 ntBASIC3.69□□□□□ -1.82
CSB-PGBD3P0DP91 MIR1253-201ENST00000408273 105 ntBASIC3.69□□□□□ -1.82
CSB-PGBD3P0DP91 SRIP3-201ENST00000413200 219 ntBASIC3.69□□□□□ -1.82
CSB-PGBD3P0DP91 UBBP3-201ENST00000445497 241 ntBASIC3.69□□□□□ -1.82
CSB-PGBD3P0DP91 AC097462.1-201ENST00000514125 324 ntBASIC3.69□□□□□ -1.82
CSB-PGBD3P0DP91 AC096725.1-201ENST00000514266 313 ntBASIC3.69□□□□□ -1.82
CSB-PGBD3P0DP91 MIR4662B-201ENST00000579498 81 ntBASIC3.69□□□□□ -1.82
CSB-PGBD3P0DP91 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.68□□□□□ -1.82
CSB-PGBD3P0DP91 Y_RNA.366-201ENST00000365540 102 ntBASIC3.68□□□□□ -1.82
CSB-PGBD3P0DP91 RNU6-1014P-201ENST00000383940 103 ntBASIC3.68□□□□□ -1.82
CSB-PGBD3P0DP91 Y_RNA.558-201ENST00000384685 113 ntBASIC3.68□□□□□ -1.82
CSB-PGBD3P0DP91 MIR1302-5-201ENST00000408164 150 ntBASIC3.68□□□□□ -1.82
CSB-PGBD3P0DP91 AC018634.1-201ENST00000437554 401 ntBASIC3.68□□□□□ -1.82
CSB-PGBD3P0DP91 RN7SL442P-201ENST00000473804 320 ntBASIC3.68□□□□□ -1.82
CSB-PGBD3P0DP91 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.68□□□□□ -1.82
CSB-PGBD3P0DP91 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
CSB-PGBD3P0DP91 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
CSB-PGBD3P0DP91 RNA5SP136-201ENST00000410906 107 ntBASIC3.67□□□□□ -1.82
CSB-PGBD3P0DP91 RPL39P34-201ENST00000477141 156 ntBASIC3.67□□□□□ -1.82
CSB-PGBD3P0DP91 NDUFA4P2-201ENST00000489989 244 ntBASIC3.67□□□□□ -1.82
CSB-PGBD3P0DP91 MIR4438-201ENST00000585271 93 ntBASIC3.67□□□□□ -1.82
CSB-PGBD3P0DP91 AC062037.1-201ENST00000605302 128 ntBASIC3.67□□□□□ -1.82
CSB-PGBD3P0DP91 U6.73-201ENST00000619194 103 ntBASIC3.67□□□□□ -1.82
CSB-PGBD3P0DP91 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
CSB-PGBD3P0DP91 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CSB-PGBD3P0DP91 MAPK10-266ENST00000641066 6555 ntBASIC3.67□□□□□ -1.82
CSB-PGBD3P0DP91 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
CSB-PGBD3P0DP91 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
CSB-PGBD3P0DP91 SNORA63.5-201ENST00000363548 123 ntBASIC3.66□□□□□ -1.82
CSB-PGBD3P0DP91 SNORD61-201ENST00000384252 73 ntBASIC3.66□□□□□ -1.82
CSB-PGBD3P0DP91 RNU6-440P-201ENST00000390882 105 ntBASIC3.66□□□□□ -1.82
CSB-PGBD3P0DP91 AC060773.1-201ENST00000421698 310 ntBASIC3.66□□□□□ -1.82
CSB-PGBD3P0DP91 RNU1-41P-201ENST00000516161 162 ntBASIC3.66□□□□□ -1.82
CSB-PGBD3P0DP91 RN7SKP43-201ENST00000516173 320 ntBASIC3.66□□□□□ -1.82
CSB-PGBD3P0DP91 RNU1-48P-201ENST00000516400 162 ntBASIC3.66□□□□□ -1.82
CSB-PGBD3P0DP91 RNU6-504P-201ENST00000516568 104 ntBASIC3.66□□□□□ -1.82
CSB-PGBD3P0DP91 RNU6-1149P-201ENST00000516810 97 ntBASIC3.66□□□□□ -1.82
CSB-PGBD3P0DP91 RNU7-172P-201ENST00000517125 64 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms