Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 SNORD45.4-201ENST00000516629 73 ntBASIC1.05□□□□□ -2.24
APOA4P06727 SNORA74.3-201ENST00000517108 154 ntBASIC1.05□□□□□ -2.24
APOA4P06727 SNORD116.3-201ENST00000517176 78 ntBASIC1.05□□□□□ -2.24
APOA4P06727 AC136932.1-201ENST00000574771 208 ntBASIC1.05□□□□□ -2.24
APOA4P06727 MIR4423-201ENST00000580922 80 ntBASIC1.05□□□□□ -2.24
APOA4P06727 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.05□□□□□ -2.24
APOA4P06727 AC084781.2-201ENST00000615568 161 ntBASIC1.05□□□□□ -2.24
APOA4P06727 AC010205.1-201ENST00000616668 449 ntBASIC1.05□□□□□ -2.24
APOA4P06727 RNU6-1084P-201ENST00000362498 107 ntBASIC1.04□□□□□ -2.24
APOA4P06727 Y_RNA.187-201ENST00000363918 113 ntBASIC1.04□□□□□ -2.24
APOA4P06727 RNU1-36P-201ENST00000365130 165 ntBASIC1.04□□□□□ -2.24
APOA4P06727 MIR516B2-201ENST00000385190 85 ntBASIC1.04□□□□□ -2.24
APOA4P06727 MLLT10P1-201ENST00000418346 262 ntBASIC1.04□□□□□ -2.24
APOA4P06727 MTCO2P27-201ENST00000420740 428 ntBASIC1.04□□□□□ -2.24
APOA4P06727 TRMT112P2-201ENST00000512910 132 ntBASIC1.04□□□□□ -2.24
APOA4P06727 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.04□□□□□ -2.24
APOA4P06727 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.04□□□□□ -2.24
APOA4P06727 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.04□□□□□ -2.24
APOA4P06727 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
APOA4P06727 snoU2-30.1-201ENST00000365012 70 ntBASIC1.03□□□□□ -2.24
APOA4P06727 RNU6-53P-201ENST00000365367 106 ntBASIC1.03□□□□□ -2.24
APOA4P06727 RNU6-1323P-201ENST00000384025 107 ntBASIC1.03□□□□□ -2.24
APOA4P06727 MIR15B-201ENST00000385045 98 ntBASIC1.03□□□□□ -2.24
APOA4P06727 RNU6-855P-201ENST00000410395 104 ntBASIC1.03□□□□□ -2.24
APOA4P06727 AL390729.2-201ENST00000416137 156 ntBASIC1.03□□□□□ -2.24
APOA4P06727 AC005840.1-201ENST00000498412 377 ntBASIC1.03□□□□□ -2.24
APOA4P06727 PDCD5P2-201ENST00000507570 312 ntBASIC1.03□□□□□ -2.24
APOA4P06727 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.03□□□□□ -2.24
APOA4P06727 AC090142.3-201ENST00000519012 385 ntBASIC1.03□□□□□ -2.24
APOA4P06727 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.03□□□□□ -2.24
APOA4P06727 AC091925.1-201ENST00000623204 462 ntBASIC1.03□□□□□ -2.24
APOA4P06727 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
APOA4P06727 Y_RNA.70-201ENST00000362886 110 ntBASIC1.02□□□□□ -2.25
APOA4P06727 RNA5SP264-201ENST00000363115 107 ntBASIC1.02□□□□□ -2.25
APOA4P06727 SNORA72.1-201ENST00000363485 129 ntBASIC1.02□□□□□ -2.25
APOA4P06727 Y_RNA.462-201ENST00000384268 102 ntBASIC1.02□□□□□ -2.25
APOA4P06727 RNU6-131P-201ENST00000391144 107 ntBASIC1.02□□□□□ -2.25
APOA4P06727 RNU6-321P-201ENST00000410912 106 ntBASIC1.02□□□□□ -2.25
APOA4P06727 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.02□□□□□ -2.25
APOA4P06727 HMGN2P32-201ENST00000444648 269 ntBASIC1.02□□□□□ -2.25
APOA4P06727 Y_RNA.632-201ENST00000459189 102 ntBASIC1.02□□□□□ -2.25
APOA4P06727 FGF7P4-201ENST00000509595 295 ntBASIC1.02□□□□□ -2.25
APOA4P06727 RNU6-1053P-201ENST00000515930 101 ntBASIC1.02□□□□□ -2.25
APOA4P06727 Y_RNA.714-201ENST00000517065 90 ntBASIC1.02□□□□□ -2.25
APOA4P06727 AL355375.2-201ENST00000574825 175 ntBASIC1.02□□□□□ -2.25
APOA4P06727 SNORD114-21-201ENST00000606412 72 ntBASIC1.02□□□□□ -2.25
APOA4P06727 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.02□□□□□ -2.25
APOA4P06727 MIR520C-201ENST00000385005 87 ntBASIC1.01□□□□□ -2.25
APOA4P06727 SNRPGP10-201ENST00000432323 225 ntBASIC1.01□□□□□ -2.25
APOA4P06727 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.01□□□□□ -2.25
APOA4P06727 RNU7-116P-201ENST00000516940 62 ntBASIC1.01□□□□□ -2.25
APOA4P06727 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.01□□□□□ -2.25
APOA4P06727 AP003716.2-201ENST00000528260 108 ntBASIC1.01□□□□□ -2.25
APOA4P06727 RNU6-1115P-201ENST00000362490 106 ntBASIC1□□□□□ -2.25
APOA4P06727 SNORD50B-201ENST00000364995 70 ntBASIC1□□□□□ -2.25
APOA4P06727 Y_RNA.310-201ENST00000365063 113 ntBASIC1□□□□□ -2.25
APOA4P06727 Y_RNA.341-201ENST00000365341 102 ntBASIC1□□□□□ -2.25
APOA4P06727 SNORD14.1-201ENST00000365609 90 ntBASIC1□□□□□ -2.25
APOA4P06727 MIR942-201ENST00000401111 86 ntBASIC1□□□□□ -2.25
APOA4P06727 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1□□□□□ -2.25
APOA4P06727 SNORD19B-201ENST00000459623 84 ntBASIC1□□□□□ -2.25
APOA4P06727 RPL39P28-201ENST00000465655 155 ntBASIC1□□□□□ -2.25
APOA4P06727 COX6CP14-201ENST00000469580 174 ntBASIC1□□□□□ -2.25
APOA4P06727 AC091951.2-201ENST00000500762 203 ntBASIC1□□□□□ -2.25
APOA4P06727 Y_RNA.772-201ENST00000606692 102 ntBASIC1□□□□□ -2.25
APOA4P06727 DLEU2_2.2-201ENST00000615474 90 ntBASIC1□□□□□ -2.25
APOA4P06727 AL138825.1-201ENST00000618587 192 ntBASIC1□□□□□ -2.25
APOA4P06727 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
APOA4P06727 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
APOA4P06727 RNY1P10-201ENST00000363268 113 ntBASIC0.99□□□□□ -2.25
APOA4P06727 RNU6-1187P-201ENST00000364771 110 ntBASIC0.99□□□□□ -2.25
APOA4P06727 Y_RNA.331-201ENST00000365267 102 ntBASIC0.99□□□□□ -2.25
APOA4P06727 Y_RNA.368-201ENST00000365547 113 ntBASIC0.99□□□□□ -2.25
APOA4P06727 Y_RNA.456-201ENST00000384232 111 ntBASIC0.99□□□□□ -2.25
APOA4P06727 Y_RNA.496-201ENST00000384444 101 ntBASIC0.99□□□□□ -2.25
APOA4P06727 Y_RNA.638-201ENST00000459374 113 ntBASIC0.99□□□□□ -2.25
APOA4P06727 ACA64.5-201ENST00000516207 127 ntBASIC0.99□□□□□ -2.25
APOA4P06727 RNU7-43P-201ENST00000516554 64 ntBASIC0.99□□□□□ -2.25
APOA4P06727 SNORA18.7-201ENST00000516910 131 ntBASIC0.99□□□□□ -2.25
APOA4P06727 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.99□□□□□ -2.25
APOA4P06727 MIR4764-201ENST00000580680 88 ntBASIC0.99□□□□□ -2.25
APOA4P06727 MIR5188-201ENST00000583467 113 ntBASIC0.99□□□□□ -2.25
APOA4P06727 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.98□□□□□ -2.25
APOA4P06727 MIR103A2-201ENST00000362154 78 ntBASIC0.98□□□□□ -2.25
APOA4P06727 Y_RNA.39-201ENST00000362620 98 ntBASIC0.98□□□□□ -2.25
APOA4P06727 RNU4-38P-201ENST00000364472 129 ntBASIC0.98□□□□□ -2.25
APOA4P06727 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC0.98□□□□□ -2.25
APOA4P06727 RNU7-41P-201ENST00000515917 61 ntBASIC0.98□□□□□ -2.25
APOA4P06727 POLR3GP1-201ENST00000594073 261 ntBASIC0.98□□□□□ -2.25
APOA4P06727 AC092447.9-201ENST00000603395 144 ntBASIC0.98□□□□□ -2.25
APOA4P06727 AC211469.2-201ENST00000605461 205 ntBASIC0.98□□□□□ -2.25
APOA4P06727 AL121655.1-201ENST00000605811 308 ntBASIC0.98□□□□□ -2.25
APOA4P06727 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.98□□□□□ -2.25
APOA4P06727 SNORD81.1-201ENST00000363064 77 ntBASIC0.97□□□□□ -2.25
APOA4P06727 Y_RNA.252-201ENST00000364556 101 ntBASIC0.97□□□□□ -2.25
APOA4P06727 RNU1-115P-201ENST00000365329 160 ntBASIC0.97□□□□□ -2.25
APOA4P06727 Y_RNA.458-201ENST00000384240 102 ntBASIC0.97□□□□□ -2.25
APOA4P06727 AC024067.1-201ENST00000426199 223 ntBASIC0.97□□□□□ -2.25
APOA4P06727 RNU6-875P-201ENST00000516488 106 ntBASIC0.97□□□□□ -2.25
APOA4P06727 SNORA40.14-201ENST00000516543 86 ntBASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms