Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.04□□□□□ -1.92
PDGFAP04085 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
PDGFAP04085 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
PDGFAP04085 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
PDGFAP04085 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
PDGFAP04085 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
PDGFAP04085 AC007064.1-201ENST00000412238 351 ntBASIC3.03□□□□□ -1.92
PDGFAP04085 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.03□□□□□ -1.92
PDGFAP04085 HMGN2P32-201ENST00000444648 269 ntBASIC3.03□□□□□ -1.92
PDGFAP04085 CYCTP-201ENST00000504253 315 ntBASIC3.03□□□□□ -1.92
PDGFAP04085 SNORD45.4-201ENST00000516629 73 ntBASIC3.03□□□□□ -1.92
PDGFAP04085 AC022513.1-201ENST00000624512 117 ntBASIC3.03□□□□□ -1.92
PDGFAP04085 AL137790.1-201ENST00000634283 177 ntBASIC3.03□□□□□ -1.92
PDGFAP04085 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
PDGFAP04085 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.03□□□□□ -1.92
PDGFAP04085 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
PDGFAP04085 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
PDGFAP04085 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PDGFAP04085 SNORA38-201ENST00000363946 132 ntBASIC3.02□□□□□ -1.93
PDGFAP04085 RNU6-268P-201ENST00000364174 107 ntBASIC3.02□□□□□ -1.93
PDGFAP04085 RNU6-755P-201ENST00000364400 103 ntBASIC3.02□□□□□ -1.93
PDGFAP04085 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PDGFAP04085 SNORA22-201ENST00000383907 134 ntBASIC3.02□□□□□ -1.93
PDGFAP04085 RNA5SP109-201ENST00000391010 116 ntBASIC3.02□□□□□ -1.93
PDGFAP04085 RNA5SP344-201ENST00000411081 104 ntBASIC3.02□□□□□ -1.93
PDGFAP04085 AC069257.2-201ENST00000441819 155 ntBASIC3.02□□□□□ -1.93
PDGFAP04085 AL606517.2-201ENST00000442855 241 ntBASIC3.02□□□□□ -1.93
PDGFAP04085 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.02□□□□□ -1.93
PDGFAP04085 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC3.02□□□□□ -1.93
PDGFAP04085 RN7SL863P-201ENST00000462370 296 ntBASIC3.02□□□□□ -1.93
PDGFAP04085 SCARNA15-202ENST00000516881 127 ntBASIC3.02□□□□□ -1.93
PDGFAP04085 MIR2276-201ENST00000516886 89 ntBASIC3.02□□□□□ -1.93
PDGFAP04085 MIR4672-201ENST00000583126 81 ntBASIC3.02□□□□□ -1.93
PDGFAP04085 SNORA28-201ENST00000606769 126 ntBASIC3.02□□□□□ -1.93
PDGFAP04085 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.02□□□□□ -1.93
PDGFAP04085 AC022202.1-201ENST00000613515 211 ntBASIC3.02□□□□□ -1.93
PDGFAP04085 5S_rRNA.11-201ENST00000618635 84 ntBASIC3.02□□□□□ -1.93
PDGFAP04085 Clostridiales-1.3-201ENST00000637703 147 ntBASIC3.02□□□□□ -1.93
PDGFAP04085 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
PDGFAP04085 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
PDGFAP04085 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.01□□□□□ -1.93
PDGFAP04085 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
PDGFAP04085 RNU6-1019P-201ENST00000364424 107 ntBASIC3.01□□□□□ -1.93
PDGFAP04085 RNU6-1189P-201ENST00000383958 107 ntBASIC3.01□□□□□ -1.93
PDGFAP04085 SNORA80E-201ENST00000384744 137 ntBASIC3.01□□□□□ -1.93
PDGFAP04085 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC3.01□□□□□ -1.93
PDGFAP04085 Y_RNA.649-201ENST00000459077 103 ntBASIC3.01□□□□□ -1.93
PDGFAP04085 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.01□□□□□ -1.93
PDGFAP04085 RNU7-25P-201ENST00000516544 62 ntBASIC3.01□□□□□ -1.93
PDGFAP04085 MIR7106-201ENST00000612419 65 ntBASIC3.01□□□□□ -1.93
PDGFAP04085 UGP2-230ENST00000626380 276 ntTSL 5 BASIC3.01□□□□□ -1.93
PDGFAP04085 AC068647.1-201ENST00000489539 2265 ntBASIC3.01□□□□□ -1.93
PDGFAP04085 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
PDGFAP04085 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC3.01□□□□□ -1.93
PDGFAP04085 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.01□□□□□ -1.93
PDGFAP04085 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.01□□□□□ -1.93
PDGFAP04085 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3□□□□□ -1.93
PDGFAP04085 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
PDGFAP04085 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
PDGFAP04085 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3□□□□□ -1.93
PDGFAP04085 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
PDGFAP04085 RNU1-70P-201ENST00000362618 164 ntBASIC3□□□□□ -1.93
PDGFAP04085 SNORD115-28-201ENST00000363931 81 ntBASIC3□□□□□ -1.93
PDGFAP04085 RNU1-148P-201ENST00000384472 162 ntBASIC3□□□□□ -1.93
PDGFAP04085 MIR887-201ENST00000401258 79 ntBASIC3□□□□□ -1.93
PDGFAP04085 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC3□□□□□ -1.93
PDGFAP04085 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3□□□□□ -1.93
PDGFAP04085 AC006023.1-201ENST00000603944 259 ntBASIC3□□□□□ -1.93
PDGFAP04085 MIR8054-201ENST00000620877 86 ntBASIC3□□□□□ -1.93
PDGFAP04085 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
PDGFAP04085 MTND5P18-201ENST00000445624 1801 ntBASIC3□□□□□ -1.93
PDGFAP04085 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
PDGFAP04085 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
PDGFAP04085 AC093831.2-201ENST00000624393 3427 ntBASIC2.99□□□□□ -1.93
PDGFAP04085 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
PDGFAP04085 SNORA5B-201ENST00000363786 132 ntBASIC2.99□□□□□ -1.93
PDGFAP04085 RNU6-880P-201ENST00000384526 107 ntBASIC2.99□□□□□ -1.93
PDGFAP04085 RNU6-440P-201ENST00000390882 105 ntBASIC2.99□□□□□ -1.93
PDGFAP04085 MIR1263-201ENST00000408324 86 ntBASIC2.99□□□□□ -1.93
PDGFAP04085 AC063976.4-201ENST00000421971 163 ntBASIC2.99□□□□□ -1.93
PDGFAP04085 BX510359.4-201ENST00000423750 193 ntBASIC2.99□□□□□ -1.93
PDGFAP04085 SNRPGP14-201ENST00000435400 219 ntBASIC2.99□□□□□ -1.93
PDGFAP04085 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.99□□□□□ -1.93
PDGFAP04085 STAG3L5P-204ENST00000443759 179 ntBASIC2.99□□□□□ -1.93
PDGFAP04085 RN7SL429P-201ENST00000479090 223 ntBASIC2.99□□□□□ -1.93
PDGFAP04085 RN7SL489P-201ENST00000486185 223 ntBASIC2.99□□□□□ -1.93
PDGFAP04085 RN7SL327P-201ENST00000488659 223 ntBASIC2.99□□□□□ -1.93
PDGFAP04085 AC008885.1-201ENST00000514930 301 ntBASIC2.99□□□□□ -1.93
PDGFAP04085 RNA5SP137-201ENST00000516833 135 ntBASIC2.99□□□□□ -1.93
PDGFAP04085 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.99□□□□□ -1.93
PDGFAP04085 AC004486.1-201ENST00000546846 233 ntBASIC2.99□□□□□ -1.93
PDGFAP04085 AC084364.2-201ENST00000546924 395 ntBASIC2.99□□□□□ -1.93
PDGFAP04085 RN7SL853P-201ENST00000617250 223 ntBASIC2.99□□□□□ -1.93
PDGFAP04085 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.99□□□□□ -1.93
PDGFAP04085 AC093010.3-201ENST00000570269 15214 ntBASIC2.99□□□□□ -1.93
PDGFAP04085 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.99□□□□□ -1.93
PDGFAP04085 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
PDGFAP04085 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
PDGFAP04085 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
PDGFAP04085 SNORD56.5-201ENST00000364281 72 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms