Protein–RNA interactions for Protein: P00558

PGK1, Phosphoglycerate kinase 1, humanhuman

Predictions only

Length 417 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1P00558 RNU6-1105P-201ENST00000384774 107 ntBASIC1.12□□□□□ -2.23
PGK1P00558 MIR660-201ENST00000385235 97 ntBASIC1.12□□□□□ -2.23
PGK1P00558 MIR618-201ENST00000385287 98 ntBASIC1.12□□□□□ -2.23
PGK1P00558 AL034345.1-201ENST00000407768 123 ntBASIC1.12□□□□□ -2.23
PGK1P00558 RNU6-130P-201ENST00000411112 103 ntBASIC1.12□□□□□ -2.23
PGK1P00558 AL354751.2-201ENST00000415471 210 ntBASIC1.12□□□□□ -2.23
PGK1P00558 AL160004.2-201ENST00000432935 350 ntBASIC1.12□□□□□ -2.23
PGK1P00558 RPEP5-201ENST00000441137 268 ntBASIC1.12□□□□□ -2.23
PGK1P00558 HSPE1P13-201ENST00000451143 297 ntBASIC1.12□□□□□ -2.23
PGK1P00558 RNU6-436P-201ENST00000516171 114 ntBASIC1.12□□□□□ -2.23
PGK1P00558 RNU6-155P-201ENST00000516347 100 ntBASIC1.12□□□□□ -2.23
PGK1P00558 SNORA40.14-201ENST00000516543 86 ntBASIC1.12□□□□□ -2.23
PGK1P00558 RN7SKP88-201ENST00000516847 250 ntBASIC1.12□□□□□ -2.23
PGK1P00558 RNU6-1096P-201ENST00000517089 102 ntBASIC1.12□□□□□ -2.23
PGK1P00558 AC022441.3-201ENST00000605737 136 ntBASIC1.12□□□□□ -2.23
PGK1P00558 PART1_1.1-201ENST00000611761 217 ntBASIC1.12□□□□□ -2.23
PGK1P00558 7SK.8-201ENST00000612110 250 ntBASIC1.12□□□□□ -2.23
PGK1P00558 7SK.11-201ENST00000615477 250 ntBASIC1.12□□□□□ -2.23
PGK1P00558 AC073349.3-201ENST00000617616 186 ntBASIC1.12□□□□□ -2.23
PGK1P00558 7SK.13-201ENST00000622040 250 ntBASIC1.12□□□□□ -2.23
PGK1P00558 MTND4P29-201ENST00000503122 1372 ntBASIC1.11□□□□□ -2.23
PGK1P00558 MIR369-201ENST00000362155 70 ntBASIC1.11□□□□□ -2.23
PGK1P00558 Y_RNA.31-201ENST00000362574 102 ntBASIC1.11□□□□□ -2.23
PGK1P00558 Y_RNA.230-201ENST00000364348 109 ntBASIC1.11□□□□□ -2.23
PGK1P00558 Y_RNA.267-201ENST00000364679 109 ntBASIC1.11□□□□□ -2.23
PGK1P00558 RNU6-1175P-201ENST00000365200 107 ntBASIC1.11□□□□□ -2.23
PGK1P00558 RNU6-308P-201ENST00000390957 107 ntBASIC1.11□□□□□ -2.23
PGK1P00558 U8.16-201ENST00000391279 133 ntBASIC1.11□□□□□ -2.23
PGK1P00558 RNA5SP511-201ENST00000410487 115 ntBASIC1.11□□□□□ -2.23
PGK1P00558 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.11□□□□□ -2.23
PGK1P00558 RNU6-1132P-201ENST00000459214 107 ntBASIC1.11□□□□□ -2.23
PGK1P00558 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.11□□□□□ -2.23
PGK1P00558 AC010655.3-201ENST00000478818 450 ntBASIC1.11□□□□□ -2.23
PGK1P00558 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
PGK1P00558 AP002004.2-201ENST00000531656 154 ntBASIC1.11□□□□□ -2.23
PGK1P00558 CYP3A137P-201ENST00000562436 69 ntBASIC1.11□□□□□ -2.23
PGK1P00558 MIR4778-201ENST00000577635 80 ntBASIC1.11□□□□□ -2.23
PGK1P00558 AC004832.4-201ENST00000608952 331 ntBASIC1.11□□□□□ -2.23
PGK1P00558 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.11□□□□□ -2.23
PGK1P00558 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.11□□□□□ -2.23
PGK1P00558 SNORD81.1-201ENST00000363064 77 ntBASIC1.1□□□□□ -2.23
PGK1P00558 RNU6-867P-201ENST00000364956 107 ntBASIC1.1□□□□□ -2.23
PGK1P00558 RNU6-136P-201ENST00000384663 107 ntBASIC1.1□□□□□ -2.23
PGK1P00558 MIR520G-201ENST00000385064 90 ntBASIC1.1□□□□□ -2.23
PGK1P00558 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
PGK1P00558 MCFD2P1-201ENST00000417812 300 ntBASIC1.1□□□□□ -2.23
PGK1P00558 PMCHL1-202ENST00000423102 261 ntBASIC1.1□□□□□ -2.23
PGK1P00558 AL162725.1-201ENST00000435405 301 ntBASIC1.1□□□□□ -2.23
PGK1P00558 AL133373.1-201ENST00000497098 94 ntBASIC1.1□□□□□ -2.23
PGK1P00558 RNU7-40P-201ENST00000516397 64 ntBASIC1.1□□□□□ -2.23
PGK1P00558 RNA5SP168-201ENST00000516642 112 ntBASIC1.1□□□□□ -2.23
PGK1P00558 RNU2-56P-201ENST00000516826 190 ntBASIC1.1□□□□□ -2.23
PGK1P00558 RNU6-165P-201ENST00000517170 99 ntBASIC1.1□□□□□ -2.23
PGK1P00558 RN7SKP295-201ENST00000517264 153 ntBASIC1.1□□□□□ -2.23
PGK1P00558 RPL21P9-201ENST00000556149 474 ntBASIC1.1□□□□□ -2.23
PGK1P00558 AC006157.1-201ENST00000611750 366 ntBASIC1.1□□□□□ -2.23
PGK1P00558 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
PGK1P00558 Y_RNA.148-201ENST00000363557 117 ntBASIC1.09□□□□□ -2.23
PGK1P00558 MTND4P19-201ENST00000446659 478 ntBASIC1.09□□□□□ -2.23
PGK1P00558 SNORA25.10-201ENST00000515926 124 ntBASIC1.09□□□□□ -2.23
PGK1P00558 MIR3664-201ENST00000579074 99 ntBASIC1.09□□□□□ -2.23
PGK1P00558 AL162424.1-201ENST00000602325 221 ntBASIC1.09□□□□□ -2.23
PGK1P00558 AC006380.1-201ENST00000603598 186 ntBASIC1.09□□□□□ -2.23
PGK1P00558 AL121655.1-201ENST00000605811 308 ntBASIC1.09□□□□□ -2.23
PGK1P00558 AL138825.1-201ENST00000618587 192 ntBASIC1.09□□□□□ -2.23
PGK1P00558 AC106754.2-201ENST00000623006 233 ntBASIC1.09□□□□□ -2.23
PGK1P00558 AL008636.1-201ENST00000625038 1018 ntBASIC1.09□□□□□ -2.23
PGK1P00558 SNORD3E-202ENST00000627253 216 ntBASIC1.09□□□□□ -2.23
PGK1P00558 RNU4-41P-201ENST00000364426 143 ntBASIC1.08□□□□□ -2.24
PGK1P00558 Y_RNA.265-201ENST00000364677 108 ntBASIC1.08□□□□□ -2.24
PGK1P00558 MIR532-201ENST00000385025 91 ntBASIC1.08□□□□□ -2.24
PGK1P00558 SNORD41-201ENST00000386967 70 ntBASIC1.08□□□□□ -2.24
PGK1P00558 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
PGK1P00558 Z98949.2-201ENST00000440996 144 ntBASIC1.08□□□□□ -2.24
PGK1P00558 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.08□□□□□ -2.24
PGK1P00558 RPL39P38-201ENST00000467018 153 ntBASIC1.08□□□□□ -2.24
PGK1P00558 AL049830.1-201ENST00000468034 425 ntBASIC1.08□□□□□ -2.24
PGK1P00558 RNU6-475P-201ENST00000516073 104 ntBASIC1.08□□□□□ -2.24
PGK1P00558 SNORA70.12-201ENST00000516084 153 ntBASIC1.08□□□□□ -2.24
PGK1P00558 RNU6-917P-201ENST00000516294 104 ntBASIC1.08□□□□□ -2.24
PGK1P00558 AC040926.1-201ENST00000530195 238 ntBASIC1.08□□□□□ -2.24
PGK1P00558 MIR4698-201ENST00000577795 80 ntBASIC1.08□□□□□ -2.24
PGK1P00558 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.08□□□□□ -2.24
PGK1P00558 SNORA28-201ENST00000606769 126 ntBASIC1.08□□□□□ -2.24
PGK1P00558 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.08□□□□□ -2.24
PGK1P00558 AL160413.1-201ENST00000622780 310 ntBASIC1.08□□□□□ -2.24
PGK1P00558 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
PGK1P00558 RNU6-324P-201ENST00000363957 106 ntBASIC1.07□□□□□ -2.24
PGK1P00558 Y_RNA.329-201ENST00000365209 107 ntBASIC1.07□□□□□ -2.24
PGK1P00558 Y_RNA.645-201ENST00000391229 102 ntBASIC1.07□□□□□ -2.24
PGK1P00558 AC022028.1-201ENST00000412054 408 ntBASIC1.07□□□□□ -2.24
PGK1P00558 AC005042.3-201ENST00000453230 174 ntBASIC1.07□□□□□ -2.24
PGK1P00558 AL358944.1-201ENST00000528537 144 ntBASIC1.07□□□□□ -2.24
PGK1P00558 AC136932.1-201ENST00000574771 208 ntBASIC1.07□□□□□ -2.24
PGK1P00558 MIR6857-201ENST00000613267 93 ntBASIC1.07□□□□□ -2.24
PGK1P00558 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.07□□□□□ -2.24
PGK1P00558 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.06□□□□□ -2.24
PGK1P00558 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
PGK1P00558 Y_RNA.813-201ENST00000364639 102 ntBASIC1.06□□□□□ -2.24
PGK1P00558 RNU1-133P-201ENST00000364867 167 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 138.8 ms