Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 AP001094.1-201ENST00000579805 193 ntBASIC0.88□□□□□ -2.27
CTDNEP1O95476 C8orf59P2-201ENST00000603441 271 ntBASIC0.88□□□□□ -2.27
CTDNEP1O95476 AC004832.4-201ENST00000608952 331 ntBASIC0.88□□□□□ -2.27
CTDNEP1O95476 PART1_1.1-201ENST00000611761 217 ntBASIC0.88□□□□□ -2.27
CTDNEP1O95476 AC242852.1-201ENST00000612151 96 ntBASIC0.88□□□□□ -2.27
CTDNEP1O95476 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.88□□□□□ -2.27
CTDNEP1O95476 AC010205.1-201ENST00000616668 449 ntBASIC0.88□□□□□ -2.27
CTDNEP1O95476 AC244015.1-201ENST00000622301 99 ntBASIC0.88□□□□□ -2.27
CTDNEP1O95476 MTND4P29-201ENST00000503122 1372 ntBASIC0.87□□□□□ -2.27
CTDNEP1O95476 MIR369-201ENST00000362155 70 ntBASIC0.87□□□□□ -2.27
CTDNEP1O95476 Y_RNA.329-201ENST00000365209 107 ntBASIC0.87□□□□□ -2.27
CTDNEP1O95476 SNORD42.2-201ENST00000365570 69 ntBASIC0.87□□□□□ -2.27
CTDNEP1O95476 Y_RNA.395-201ENST00000383945 109 ntBASIC0.87□□□□□ -2.27
CTDNEP1O95476 MIR499A-201ENST00000384903 122 ntBASIC0.87□□□□□ -2.27
CTDNEP1O95476 SNORD41-201ENST00000386967 70 ntBASIC0.87□□□□□ -2.27
CTDNEP1O95476 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
CTDNEP1O95476 RNU6-308P-201ENST00000390957 107 ntBASIC0.87□□□□□ -2.27
CTDNEP1O95476 MTND4LP11-201ENST00000422184 280 ntBASIC0.87□□□□□ -2.27
CTDNEP1O95476 AL160004.2-201ENST00000432935 350 ntBASIC0.87□□□□□ -2.27
CTDNEP1O95476 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.87□□□□□ -2.27
CTDNEP1O95476 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.87□□□□□ -2.27
CTDNEP1O95476 RNU2-56P-201ENST00000516826 190 ntBASIC0.87□□□□□ -2.27
CTDNEP1O95476 AL162424.1-201ENST00000602325 221 ntBASIC0.87□□□□□ -2.27
CTDNEP1O95476 MIR6504-201ENST00000613520 61 ntBASIC0.87□□□□□ -2.27
CTDNEP1O95476 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
CTDNEP1O95476 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.87□□□□□ -2.27
CTDNEP1O95476 Y_RNA.112-201ENST00000363250 102 ntBASIC0.86□□□□□ -2.27
CTDNEP1O95476 RNU1-124P-201ENST00000363861 145 ntBASIC0.86□□□□□ -2.27
CTDNEP1O95476 Y_RNA.230-201ENST00000364348 109 ntBASIC0.86□□□□□ -2.27
CTDNEP1O95476 MIR653-201ENST00000385279 96 ntBASIC0.86□□□□□ -2.27
CTDNEP1O95476 MT-TD-201ENST00000387419 68 ntBASIC0.86□□□□□ -2.27
CTDNEP1O95476 SNORD116-28-201ENST00000516123 91 ntBASIC0.86□□□□□ -2.27
CTDNEP1O95476 SNORA40.14-201ENST00000516543 86 ntBASIC0.86□□□□□ -2.27
CTDNEP1O95476 RNU6-922P-201ENST00000516753 99 ntBASIC0.86□□□□□ -2.27
CTDNEP1O95476 RN7SKP295-201ENST00000517264 153 ntBASIC0.86□□□□□ -2.27
CTDNEP1O95476 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.86□□□□□ -2.27
CTDNEP1O95476 AC006380.1-201ENST00000603598 186 ntBASIC0.86□□□□□ -2.27
CTDNEP1O95476 AC136443.5-201ENST00000603741 370 ntBASIC0.86□□□□□ -2.27
CTDNEP1O95476 AC211469.2-201ENST00000605461 205 ntBASIC0.86□□□□□ -2.27
CTDNEP1O95476 SNORA28-201ENST00000606769 126 ntBASIC0.86□□□□□ -2.27
CTDNEP1O95476 AC006157.1-201ENST00000611750 366 ntBASIC0.86□□□□□ -2.27
CTDNEP1O95476 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.86□□□□□ -2.27
CTDNEP1O95476 AC068647.2-201ENST00000637380 353 ntBASIC0.86□□□□□ -2.27
CTDNEP1O95476 Y_RNA.39-201ENST00000362620 98 ntBASIC0.85□□□□□ -2.27
CTDNEP1O95476 RNU6-324P-201ENST00000363957 106 ntBASIC0.85□□□□□ -2.27
CTDNEP1O95476 Y_RNA.191-201ENST00000363972 113 ntBASIC0.85□□□□□ -2.27
CTDNEP1O95476 RNU4-76P-201ENST00000364509 141 ntBASIC0.85□□□□□ -2.27
CTDNEP1O95476 MIR526A1-201ENST00000384897 85 ntBASIC0.85□□□□□ -2.27
CTDNEP1O95476 MIR520G-201ENST00000385064 90 ntBASIC0.85□□□□□ -2.27
CTDNEP1O95476 Y_RNA.645-201ENST00000391229 102 ntBASIC0.85□□□□□ -2.27
CTDNEP1O95476 RNA5SP482-201ENST00000391269 118 ntBASIC0.85□□□□□ -2.27
CTDNEP1O95476 MCFD2P1-201ENST00000417812 300 ntBASIC0.85□□□□□ -2.27
CTDNEP1O95476 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.85□□□□□ -2.27
CTDNEP1O95476 PMCHL1-202ENST00000423102 261 ntBASIC0.85□□□□□ -2.27
CTDNEP1O95476 MTND4P19-201ENST00000446659 478 ntBASIC0.85□□□□□ -2.27
CTDNEP1O95476 RPS20P10-201ENST00000451209 253 ntBASIC0.85□□□□□ -2.27
CTDNEP1O95476 Y_RNA.639-201ENST00000458981 102 ntBASIC0.85□□□□□ -2.27
CTDNEP1O95476 RPL39P28-201ENST00000465655 155 ntBASIC0.85□□□□□ -2.27
CTDNEP1O95476 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.85□□□□□ -2.27
CTDNEP1O95476 RN7SKP88-201ENST00000516847 250 ntBASIC0.85□□□□□ -2.27
CTDNEP1O95476 AC136932.1-201ENST00000574771 208 ntBASIC0.85□□□□□ -2.27
CTDNEP1O95476 DEFB117-201ENST00000602356 141 ntBASIC0.85□□□□□ -2.27
CTDNEP1O95476 7SK.8-201ENST00000612110 250 ntBASIC0.85□□□□□ -2.27
CTDNEP1O95476 7SK.11-201ENST00000615477 250 ntBASIC0.85□□□□□ -2.27
CTDNEP1O95476 AL591926.4-201ENST00000616895 298 ntBASIC0.85□□□□□ -2.27
CTDNEP1O95476 7SK.13-201ENST00000622040 250 ntBASIC0.85□□□□□ -2.27
CTDNEP1O95476 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.84□□□□□ -2.27
CTDNEP1O95476 RNU6-199P-201ENST00000362954 107 ntBASIC0.84□□□□□ -2.27
CTDNEP1O95476 Y_RNA.813-201ENST00000364639 102 ntBASIC0.84□□□□□ -2.27
CTDNEP1O95476 Y_RNA.286-201ENST00000364813 102 ntBASIC0.84□□□□□ -2.27
CTDNEP1O95476 SNORD114-22-201ENST00000365423 72 ntBASIC0.84□□□□□ -2.27
CTDNEP1O95476 RNU6-474P-201ENST00000384243 107 ntBASIC0.84□□□□□ -2.27
CTDNEP1O95476 RNU6-937P-201ENST00000384325 106 ntBASIC0.84□□□□□ -2.27
CTDNEP1O95476 SNORA25-201ENST00000384384 134 ntBASIC0.84□□□□□ -2.27
CTDNEP1O95476 AL590004.1-201ENST00000405321 300 ntBASIC0.84□□□□□ -2.27
CTDNEP1O95476 RNU4-30P-201ENST00000410245 143 ntBASIC0.84□□□□□ -2.27
CTDNEP1O95476 RNU7-12P-201ENST00000516030 62 ntBASIC0.84□□□□□ -2.27
CTDNEP1O95476 SNORA70.12-201ENST00000516084 153 ntBASIC0.84□□□□□ -2.27
CTDNEP1O95476 RNU7-28P-201ENST00000516759 62 ntBASIC0.84□□□□□ -2.27
CTDNEP1O95476 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
CTDNEP1O95476 AL358944.1-201ENST00000528537 144 ntBASIC0.84□□□□□ -2.27
CTDNEP1O95476 AC013244.2-201ENST00000603396 103 ntBASIC0.84□□□□□ -2.27
CTDNEP1O95476 AL121655.1-201ENST00000605811 308 ntBASIC0.84□□□□□ -2.27
CTDNEP1O95476 BX284668.6-201ENST00000606899 438 ntBASIC0.84□□□□□ -2.27
CTDNEP1O95476 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.84□□□□□ -2.27
CTDNEP1O95476 AC027335.2-201ENST00000624030 375 ntBASIC0.84□□□□□ -2.27
CTDNEP1O95476 Y_RNA.143-201ENST00000363520 106 ntBASIC0.83□□□□□ -2.28
CTDNEP1O95476 Y_RNA.226-201ENST00000364337 114 ntBASIC0.83□□□□□ -2.28
CTDNEP1O95476 Y_RNA.310-201ENST00000365063 113 ntBASIC0.83□□□□□ -2.28
CTDNEP1O95476 Y_RNA.331-201ENST00000365267 102 ntBASIC0.83□□□□□ -2.28
CTDNEP1O95476 MIR562-201ENST00000384894 95 ntBASIC0.83□□□□□ -2.28
CTDNEP1O95476 MIR146A-201ENST00000385201 99 ntBASIC0.83□□□□□ -2.28
CTDNEP1O95476 RNA5SP247-201ENST00000411181 105 ntBASIC0.83□□□□□ -2.28
CTDNEP1O95476 PIGPP3-201ENST00000425307 415 ntBASIC0.83□□□□□ -2.28
CTDNEP1O95476 AC004941.2-201ENST00000427009 228 ntBASIC0.83□□□□□ -2.28
CTDNEP1O95476 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.83□□□□□ -2.28
CTDNEP1O95476 AC005042.3-201ENST00000453230 174 ntBASIC0.83□□□□□ -2.28
CTDNEP1O95476 AC040926.1-201ENST00000530195 238 ntBASIC0.83□□□□□ -2.28
CTDNEP1O95476 AC090049.2-201ENST00000550377 109 ntBASIC0.83□□□□□ -2.28
CTDNEP1O95476 MIR3145-201ENST00000580727 82 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms