Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AC112206.4-201ENST00000515142 405 ntBASIC-0.7□□□□□ -2.52
USH2AO75445 AC126544.2-201ENST00000625174 749 ntBASIC-0.7□□□□□ -2.52
USH2AO75445 RNU6-828P-201ENST00000364876 107 ntBASIC-0.7□□□□□ -2.52
USH2AO75445 RNU2-54P-201ENST00000410299 190 ntBASIC-0.7□□□□□ -2.52
USH2AO75445 MIR4423-201ENST00000580922 80 ntBASIC-0.7□□□□□ -2.52
USH2AO75445 AL161798.1-201ENST00000604630 131 ntBASIC-0.7□□□□□ -2.52
USH2AO75445 AC010999.1-201ENST00000611856 324 ntBASIC-0.7□□□□□ -2.52
USH2AO75445 MTND1P37-201ENST00000636562 264 ntBASIC-0.7□□□□□ -2.52
USH2AO75445 SNORA1B-201ENST00000362535 133 ntBASIC-0.7□□□□□ -2.52
USH2AO75445 RPP40P1-201ENST00000426762 456 ntBASIC-0.7□□□□□ -2.52
USH2AO75445 COX7BP2-201ENST00000437976 242 ntBASIC-0.7□□□□□ -2.52
USH2AO75445 RNU7-59P-201ENST00000459101 61 ntBASIC-0.7□□□□□ -2.52
USH2AO75445 snoU13.16-201ENST00000459350 104 ntBASIC-0.7□□□□□ -2.52
USH2AO75445 RNU5F-4P-201ENST00000516581 114 ntBASIC-0.7□□□□□ -2.52
USH2AO75445 AC245505.1-201ENST00000556398 224 ntBASIC-0.7□□□□□ -2.52
USH2AO75445 AC120024.2-201ENST00000576526 175 ntBASIC-0.7□□□□□ -2.52
USH2AO75445 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.7□□□□□ -2.52
USH2AO75445 MIR4275-201ENST00000636486 87 ntBASIC-0.7□□□□□ -2.52
USH2AO75445 Y_RNA.9-201ENST00000362354 101 ntBASIC-0.7□□□□□ -2.52
USH2AO75445 RNU6-905P-201ENST00000384434 107 ntBASIC-0.7□□□□□ -2.52
USH2AO75445 RNU6-244P-201ENST00000391028 104 ntBASIC-0.7□□□□□ -2.52
USH2AO75445 AC010486.3-201ENST00000511602 785 ntBASIC-0.7□□□□□ -2.52
USH2AO75445 AC110760.3-202ENST00000515177 371 ntBASIC-0.7□□□□□ -2.52
USH2AO75445 VN1R87P-201ENST00000596706 487 ntBASIC-0.7□□□□□ -2.52
USH2AO75445 AL138960.2-201ENST00000625145 535 ntBASIC-0.7□□□□□ -2.52
USH2AO75445 RNU5E-6P-201ENST00000365574 115 ntBASIC-0.71□□□□□ -2.52
USH2AO75445 RNU6-641P-201ENST00000384006 107 ntBASIC-0.71□□□□□ -2.52
USH2AO75445 RNU6-1152P-201ENST00000384576 107 ntBASIC-0.71□□□□□ -2.52
USH2AO75445 SNORD28-201ENST00000384706 75 ntBASIC-0.71□□□□□ -2.52
USH2AO75445 SNORD65.1-201ENST00000390889 71 ntBASIC-0.71□□□□□ -2.52
USH2AO75445 MTATP6P13-201ENST00000438531 667 ntBASIC-0.71□□□□□ -2.52
USH2AO75445 RNU7-185P-201ENST00000459215 60 ntBASIC-0.71□□□□□ -2.52
USH2AO75445 GMFBP1-201ENST00000467831 427 ntBASIC-0.71□□□□□ -2.52
USH2AO75445 RNU6-488P-201ENST00000515918 99 ntBASIC-0.71□□□□□ -2.52
USH2AO75445 RNU6-840P-201ENST00000517275 65 ntBASIC-0.71□□□□□ -2.52
USH2AO75445 AC068339.1-201ENST00000526965 141 ntBASIC-0.71□□□□□ -2.52
USH2AO75445 RNU6-227P-201ENST00000362865 103 ntBASIC-0.71□□□□□ -2.52
USH2AO75445 SNORD68-201ENST00000363214 84 ntBASIC-0.71□□□□□ -2.52
USH2AO75445 RNU6-1226P-201ENST00000384317 107 ntBASIC-0.71□□□□□ -2.52
USH2AO75445 RNU6-441P-201ENST00000384545 106 ntBASIC-0.71□□□□□ -2.52
USH2AO75445 MIR15B-201ENST00000385045 98 ntBASIC-0.71□□□□□ -2.52
USH2AO75445 RPS3AP3-201ENST00000411933 242 ntBASIC-0.71□□□□□ -2.52
USH2AO75445 AC008134.1-201ENST00000420943 193 ntBASIC-0.71□□□□□ -2.52
USH2AO75445 RPL7P42-201ENST00000481005 679 ntBASIC-0.71□□□□□ -2.52
USH2AO75445 AC111193.1-201ENST00000504097 155 ntBASIC-0.71□□□□□ -2.52
USH2AO75445 RNU6-927P-201ENST00000516199 100 ntBASIC-0.71□□□□□ -2.52
USH2AO75445 AC115990.1-201ENST00000526957 301 ntBASIC-0.71□□□□□ -2.52
USH2AO75445 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC-0.71□□□□□ -2.52
USH2AO75445 AC099785.1-201ENST00000605697 437 ntBASIC-0.71□□□□□ -2.52
USH2AO75445 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.71□□□□□ -2.52
USH2AO75445 AC011603.4-201ENST00000611325 277 ntBASIC-0.71□□□□□ -2.52
USH2AO75445 AL159972.1-201ENST00000625150 448 ntBASIC-0.71□□□□□ -2.52
USH2AO75445 AL163152.1-201ENST00000642001 374 ntBASIC-0.71□□□□□ -2.52
USH2AO75445 Y_RNA.42-201ENST00000362660 108 ntBASIC-0.71□□□□□ -2.52
USH2AO75445 snoU2-30.2-201ENST00000362805 70 ntBASIC-0.71□□□□□ -2.52
USH2AO75445 Y_RNA.240-201ENST00000364469 95 ntBASIC-0.71□□□□□ -2.52
USH2AO75445 RNU6-424P-201ENST00000384367 105 ntBASIC-0.71□□□□□ -2.52
USH2AO75445 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.71□□□□□ -2.52
USH2AO75445 Y_RNA.647-201ENST00000459194 112 ntBASIC-0.71□□□□□ -2.52
USH2AO75445 Y_RNA.640-201ENST00000459296 112 ntBASIC-0.71□□□□□ -2.52
USH2AO75445 AC114982.2-201ENST00000461396 358 ntBASIC-0.71□□□□□ -2.52
USH2AO75445 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC-0.71□□□□□ -2.52
USH2AO75445 Y_RNA.803-201ENST00000614432 112 ntBASIC-0.71□□□□□ -2.52
USH2AO75445 Y_RNA.815-201ENST00000616655 112 ntBASIC-0.71□□□□□ -2.52
USH2AO75445 Y_RNA.795-201ENST00000619475 112 ntBASIC-0.71□□□□□ -2.52
USH2AO75445 Y_RNA.827-201ENST00000638104 112 ntBASIC-0.71□□□□□ -2.52
USH2AO75445 RNU6-1138P-201ENST00000365359 106 ntBASIC-0.71□□□□□ -2.52
USH2AO75445 RNU6-1286P-201ENST00000383871 107 ntBASIC-0.71□□□□□ -2.52
USH2AO75445 RNU6-1264P-201ENST00000383891 107 ntBASIC-0.71□□□□□ -2.52
USH2AO75445 RNU6-442P-201ENST00000383968 104 ntBASIC-0.71□□□□□ -2.52
USH2AO75445 MIR649-201ENST00000384843 97 ntBASIC-0.71□□□□□ -2.52
USH2AO75445 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC-0.71□□□□□ -2.52
USH2AO75445 MIR548I3-201ENST00000408378 149 ntBASIC-0.71□□□□□ -2.52
USH2AO75445 AC079781.2-201ENST00000446424 169 ntBASIC-0.71□□□□□ -2.52
USH2AO75445 AL606517.1-201ENST00000446914 387 ntBASIC-0.71□□□□□ -2.52
USH2AO75445 Y_RNA.652-201ENST00000458902 102 ntBASIC-0.71□□□□□ -2.52
USH2AO75445 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC-0.71□□□□□ -2.52
USH2AO75445 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-0.71□□□□□ -2.52
USH2AO75445 MIR8066-201ENST00000617280 78 ntBASIC-0.71□□□□□ -2.52
USH2AO75445 AC092656.1-203ENST00000624134 423 ntBASIC-0.71□□□□□ -2.52
USH2AO75445 SNORD115-16-201ENST00000363887 82 ntBASIC-0.71□□□□□ -2.52
USH2AO75445 Y_RNA.253-201ENST00000364562 112 ntBASIC-0.71□□□□□ -2.52
USH2AO75445 Y_RNA.509-201ENST00000384506 99 ntBASIC-0.71□□□□□ -2.52
USH2AO75445 RNU6-932P-201ENST00000391108 106 ntBASIC-0.71□□□□□ -2.52
USH2AO75445 RNU2-47P-201ENST00000410649 186 ntBASIC-0.71□□□□□ -2.52
USH2AO75445 HMGN3P1-201ENST00000453847 193 ntBASIC-0.71□□□□□ -2.52
USH2AO75445 AF186996.7-201ENST00000492781 209 ntBASIC-0.71□□□□□ -2.52
USH2AO75445 RNU6-107P-201ENST00000516643 102 ntBASIC-0.71□□□□□ -2.52
USH2AO75445 AL049861.1-201ENST00000603130 150 ntBASIC-0.71□□□□□ -2.52
USH2AO75445 AL512506.1-201ENST00000613918 449 ntBASIC-0.71□□□□□ -2.52
USH2AO75445 RNU6-397P-201ENST00000516226 104 ntBASIC-0.72□□□□□ -2.52
USH2AO75445 RNU6-856P-201ENST00000516959 98 ntBASIC-0.72□□□□□ -2.52
USH2AO75445 RNU6-58P-201ENST00000517143 103 ntBASIC-0.72□□□□□ -2.52
USH2AO75445 SNRPGP1-201ENST00000553864 222 ntBASIC-0.72□□□□□ -2.52
USH2AO75445 U6.108-201ENST00000637764 58 ntBASIC-0.72□□□□□ -2.52
USH2AO75445 RNU6-137P-201ENST00000363680 108 ntBASIC-0.72□□□□□ -2.52
USH2AO75445 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.72□□□□□ -2.52
USH2AO75445 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.72□□□□□ -2.52
USH2AO75445 ZNF736P10Y-201ENST00000403990 1110 ntBASIC-0.72□□□□□ -2.52
USH2AO75445 RNU6-1190P-201ENST00000410811 104 ntBASIC-0.72□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 136.1 ms