Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 RNU6-1227P-201ENST00000383981 107 ntBASIC1.28□□□□□ -2.2
SNX3O60493 Y_RNA.418-201ENST00000384029 102 ntBASIC1.28□□□□□ -2.2
SNX3O60493 RNU6-1105P-201ENST00000384774 107 ntBASIC1.28□□□□□ -2.2
SNX3O60493 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
SNX3O60493 SNORA67.6-201ENST00000391093 99 ntBASIC1.28□□□□□ -2.2
SNX3O60493 PIGPP3-201ENST00000425307 415 ntBASIC1.28□□□□□ -2.2
SNX3O60493 RNU6-917P-201ENST00000516294 104 ntBASIC1.28□□□□□ -2.2
SNX3O60493 RNU6-922P-201ENST00000516753 99 ntBASIC1.28□□□□□ -2.2
SNX3O60493 SNORA40.15-201ENST00000516884 107 ntBASIC1.28□□□□□ -2.2
SNX3O60493 CYP3A52P-201ENST00000563326 91 ntBASIC1.28□□□□□ -2.2
SNX3O60493 MIR3664-201ENST00000579074 99 ntBASIC1.28□□□□□ -2.2
SNX3O60493 POLR3GP1-201ENST00000594073 261 ntBASIC1.28□□□□□ -2.2
SNX3O60493 AC120024.3-201ENST00000603167 156 ntBASIC1.28□□□□□ -2.2
SNX3O60493 AL355297.3-201ENST00000604082 446 ntBASIC1.28□□□□□ -2.2
SNX3O60493 Y_RNA.153-201ENST00000363615 91 ntBASIC1.27□□□□□ -2.21
SNX3O60493 RNU6-770P-201ENST00000363929 105 ntBASIC1.27□□□□□ -2.21
SNX3O60493 Y_RNA.210-201ENST00000364161 110 ntBASIC1.27□□□□□ -2.21
SNX3O60493 RNU6-806P-201ENST00000365147 105 ntBASIC1.27□□□□□ -2.21
SNX3O60493 RNU6-163P-201ENST00000384396 106 ntBASIC1.27□□□□□ -2.21
SNX3O60493 MIR653-201ENST00000385279 96 ntBASIC1.27□□□□□ -2.21
SNX3O60493 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.27□□□□□ -2.21
SNX3O60493 AC104332.1-201ENST00000440471 797 ntBASIC1.27□□□□□ -2.21
SNX3O60493 LINC01399-202ENST00000458450 244 ntBASIC1.27□□□□□ -2.21
SNX3O60493 AC098869.1-201ENST00000481627 292 ntBASIC1.27□□□□□ -2.21
SNX3O60493 AC117454.1-201ENST00000491120 168 ntBASIC1.27□□□□□ -2.21
SNX3O60493 RNY3P15-201ENST00000516297 97 ntBASIC1.27□□□□□ -2.21
SNX3O60493 RNU7-115P-201ENST00000516433 55 ntBASIC1.27□□□□□ -2.21
SNX3O60493 AC024405.2-202ENST00000532731 184 ntBASIC1.27□□□□□ -2.21
SNX3O60493 AL513534.2-201ENST00000603836 250 ntBASIC1.27□□□□□ -2.21
SNX3O60493 AP003357.1-201ENST00000604497 148 ntBASIC1.27□□□□□ -2.21
SNX3O60493 Y_RNA.26-201ENST00000362539 101 ntBASIC1.26□□□□□ -2.21
SNX3O60493 RNU4-90P-201ENST00000362773 141 ntBASIC1.26□□□□□ -2.21
SNX3O60493 RNU6-833P-201ENST00000363486 107 ntBASIC1.26□□□□□ -2.21
SNX3O60493 RNU6-1048P-201ENST00000364054 107 ntBASIC1.26□□□□□ -2.21
SNX3O60493 RNU6-801P-201ENST00000364087 105 ntBASIC1.26□□□□□ -2.21
SNX3O60493 U8.5-201ENST00000364528 136 ntBASIC1.26□□□□□ -2.21
SNX3O60493 RNU6-60P-201ENST00000364792 103 ntBASIC1.26□□□□□ -2.21
SNX3O60493 MIR522-201ENST00000385071 87 ntBASIC1.26□□□□□ -2.21
SNX3O60493 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
SNX3O60493 Y_RNA.581-201ENST00000391017 97 ntBASIC1.26□□□□□ -2.21
SNX3O60493 MIR891A-201ENST00000401237 79 ntBASIC1.26□□□□□ -2.21
SNX3O60493 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.26□□□□□ -2.21
SNX3O60493 RNU2-14P-201ENST00000411053 191 ntBASIC1.26□□□□□ -2.21
SNX3O60493 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.26□□□□□ -2.21
SNX3O60493 MLLT10P1-201ENST00000418346 262 ntBASIC1.26□□□□□ -2.21
SNX3O60493 DYNLT3P2-201ENST00000442517 295 ntBASIC1.26□□□□□ -2.21
SNX3O60493 CYCTP-201ENST00000504253 315 ntBASIC1.26□□□□□ -2.21
SNX3O60493 AC114811.1-201ENST00000507207 168 ntBASIC1.26□□□□□ -2.21
SNX3O60493 RNU6-191P-201ENST00000516295 94 ntBASIC1.26□□□□□ -2.21
SNX3O60493 RNU7-116P-201ENST00000516940 62 ntBASIC1.26□□□□□ -2.21
SNX3O60493 SNORD53B-201ENST00000577887 78 ntBASIC1.26□□□□□ -2.21
SNX3O60493 MIR4762-201ENST00000585261 75 ntBASIC1.26□□□□□ -2.21
SNX3O60493 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
SNX3O60493 Y_RNA.19-201ENST00000362462 99 ntBASIC1.25□□□□□ -2.21
SNX3O60493 snoU2_19.2-201ENST00000363024 80 ntBASIC1.25□□□□□ -2.21
SNX3O60493 Y_RNA.276-201ENST00000364732 109 ntBASIC1.25□□□□□ -2.21
SNX3O60493 Y_RNA.569-201ENST00000384749 103 ntBASIC1.25□□□□□ -2.21
SNX3O60493 MIR215-201ENST00000384858 110 ntBASIC1.25□□□□□ -2.21
SNX3O60493 RPL21P38-201ENST00000418090 167 ntBASIC1.25□□□□□ -2.21
SNX3O60493 RPL30P7-201ENST00000479312 323 ntBASIC1.25□□□□□ -2.21
SNX3O60493 HMGN1P7-201ENST00000491722 313 ntBASIC1.25□□□□□ -2.21
SNX3O60493 RNU6-764P-201ENST00000516396 105 ntBASIC1.25□□□□□ -2.21
SNX3O60493 RN7SKP88-201ENST00000516847 250 ntBASIC1.25□□□□□ -2.21
SNX3O60493 RNU6-165P-201ENST00000517170 99 ntBASIC1.25□□□□□ -2.21
SNX3O60493 AC136628.3-201ENST00000521868 290 ntBASIC1.25□□□□□ -2.21
SNX3O60493 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.25□□□□□ -2.21
SNX3O60493 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.25□□□□□ -2.21
SNX3O60493 AC090049.2-201ENST00000550377 109 ntBASIC1.25□□□□□ -2.21
SNX3O60493 7SK.8-201ENST00000612110 250 ntBASIC1.25□□□□□ -2.21
SNX3O60493 7SK.11-201ENST00000615477 250 ntBASIC1.25□□□□□ -2.21
SNX3O60493 MIR548AY-201ENST00000617669 107 ntBASIC1.25□□□□□ -2.21
SNX3O60493 7SK.13-201ENST00000622040 250 ntBASIC1.25□□□□□ -2.21
SNX3O60493 AC027279.3-201ENST00000625055 122 ntBASIC1.25□□□□□ -2.21
SNX3O60493 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.25□□□□□ -2.21
SNX3O60493 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
SNX3O60493 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.24□□□□□ -2.21
SNX3O60493 Y_RNA.136-201ENST00000363444 102 ntBASIC1.24□□□□□ -2.21
SNX3O60493 RNU6-639P-201ENST00000384074 107 ntBASIC1.24□□□□□ -2.21
SNX3O60493 SNORD26-201ENST00000384147 75 ntBASIC1.24□□□□□ -2.21
SNX3O60493 MIR526A1-201ENST00000384897 85 ntBASIC1.24□□□□□ -2.21
SNX3O60493 SNORD41-201ENST00000386967 70 ntBASIC1.24□□□□□ -2.21
SNX3O60493 RNU6-985P-201ENST00000410182 104 ntBASIC1.24□□□□□ -2.21
SNX3O60493 CYCSP49-201ENST00000420810 319 ntBASIC1.24□□□□□ -2.21
SNX3O60493 RNU1-123P-201ENST00000458950 160 ntBASIC1.24□□□□□ -2.21
SNX3O60493 RNU7-141P-201ENST00000459304 62 ntBASIC1.24□□□□□ -2.21
SNX3O60493 RPL23AP54-201ENST00000495129 419 ntBASIC1.24□□□□□ -2.21
SNX3O60493 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.24□□□□□ -2.21
SNX3O60493 AC127455.1-201ENST00000565496 145 ntBASIC1.24□□□□□ -2.21
SNX3O60493 AL161722.3-201ENST00000605789 2983 ntBASIC1.24□□□□□ -2.21
SNX3O60493 AC134026.1-201ENST00000623249 2239 ntBASIC1.23□□□□□ -2.21
SNX3O60493 Y_RNA.64-201ENST00000362845 102 ntBASIC1.23□□□□□ -2.21
SNX3O60493 Y_RNA.203-201ENST00000364106 102 ntBASIC1.23□□□□□ -2.21
SNX3O60493 SNORA2.2-201ENST00000365473 135 ntBASIC1.23□□□□□ -2.21
SNX3O60493 SNORA72.4-201ENST00000384174 132 ntBASIC1.23□□□□□ -2.21
SNX3O60493 Y_RNA.541-201ENST00000384640 113 ntBASIC1.23□□□□□ -2.21
SNX3O60493 RNU6-1248P-201ENST00000391096 64 ntBASIC1.23□□□□□ -2.21
SNX3O60493 SNORA26.5-201ENST00000391215 123 ntBASIC1.23□□□□□ -2.21
SNX3O60493 MIR1289-2-201ENST00000408360 111 ntBASIC1.23□□□□□ -2.21
SNX3O60493 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.23□□□□□ -2.21
SNX3O60493 SNRPGP10-201ENST00000432323 225 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms