Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
GRIN3BO60391 MIR450A1-201ENST00000362262 91 ntBASIC3.15□□□□□ -1.91
GRIN3BO60391 RNU6-461P-201ENST00000364195 107 ntBASIC3.15□□□□□ -1.91
GRIN3BO60391 Y_RNA.337-201ENST00000365312 102 ntBASIC3.15□□□□□ -1.91
GRIN3BO60391 MIR1278-201ENST00000408753 81 ntBASIC3.15□□□□□ -1.91
GRIN3BO60391 RNU6-383P-201ENST00000410864 94 ntBASIC3.15□□□□□ -1.91
GRIN3BO60391 RPS27P22-201ENST00000478056 241 ntBASIC3.15□□□□□ -1.91
GRIN3BO60391 SNORA4.4-201ENST00000515921 135 ntBASIC3.15□□□□□ -1.91
GRIN3BO60391 RNA5SP380-201ENST00000517190 98 ntBASIC3.15□□□□□ -1.91
GRIN3BO60391 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.15□□□□□ -1.91
GRIN3BO60391 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC3.15□□□□□ -1.91
GRIN3BO60391 AL355297.2-201ENST00000604792 129 ntBASIC3.15□□□□□ -1.91
GRIN3BO60391 Y_RNA.35-201ENST00000362601 101 ntBASIC3.14□□□□□ -1.91
GRIN3BO60391 Y_RNA.116-201ENST00000363292 103 ntBASIC3.14□□□□□ -1.91
GRIN3BO60391 RNU1-22P-201ENST00000363334 158 ntBASIC3.14□□□□□ -1.91
GRIN3BO60391 RNU1-91P-201ENST00000364746 163 ntBASIC3.14□□□□□ -1.91
GRIN3BO60391 RNU6-1180P-201ENST00000364935 107 ntBASIC3.14□□□□□ -1.91
GRIN3BO60391 RNU6-728P-201ENST00000365375 104 ntBASIC3.14□□□□□ -1.91
GRIN3BO60391 MT-TT-201ENST00000387460 66 ntBASIC3.14□□□□□ -1.91
GRIN3BO60391 RNA5SP496-201ENST00000391240 109 ntBASIC3.14□□□□□ -1.91
GRIN3BO60391 RNA5SP511-201ENST00000410487 115 ntBASIC3.14□□□□□ -1.91
GRIN3BO60391 RNU4-43P-201ENST00000410628 137 ntBASIC3.14□□□□□ -1.91
GRIN3BO60391 RNY4P29-201ENST00000410801 97 ntBASIC3.14□□□□□ -1.91
GRIN3BO60391 RN7SKP101-201ENST00000411376 320 ntBASIC3.14□□□□□ -1.91
GRIN3BO60391 AC006461.1-201ENST00000412637 326 ntBASIC3.14□□□□□ -1.91
GRIN3BO60391 AL121914.1-201ENST00000450188 156 ntBASIC3.14□□□□□ -1.91
GRIN3BO60391 RPL23AP54-201ENST00000495129 419 ntBASIC3.14□□□□□ -1.91
GRIN3BO60391 AC234781.5-201ENST00000508429 271 ntBASIC3.14□□□□□ -1.91
GRIN3BO60391 AC097462.1-201ENST00000514125 324 ntBASIC3.14□□□□□ -1.91
GRIN3BO60391 RNU6-63P-201ENST00000516690 95 ntBASIC3.14□□□□□ -1.91
GRIN3BO60391 RNU6-762P-201ENST00000517107 102 ntBASIC3.14□□□□□ -1.91
GRIN3BO60391 U2.20-201ENST00000613956 192 ntBASIC3.14□□□□□ -1.91
GRIN3BO60391 WWP1P1-201ENST00000466609 2769 ntBASIC3.14□□□□□ -1.91
GRIN3BO60391 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
GRIN3BO60391 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
GRIN3BO60391 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
GRIN3BO60391 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
GRIN3BO60391 MIR340-201ENST00000362125 95 ntBASIC3.13□□□□□ -1.91
GRIN3BO60391 RNU6-743P-201ENST00000364151 106 ntBASIC3.13□□□□□ -1.91
GRIN3BO60391 RNU6-915P-201ENST00000364943 103 ntBASIC3.13□□□□□ -1.91
GRIN3BO60391 RNU6-643P-201ENST00000384018 107 ntBASIC3.13□□□□□ -1.91
GRIN3BO60391 SNORA72-201ENST00000384339 132 ntBASIC3.13□□□□□ -1.91
GRIN3BO60391 MIR15B-201ENST00000385045 98 ntBASIC3.13□□□□□ -1.91
GRIN3BO60391 SNORA12.1-201ENST00000390873 148 ntBASIC3.13□□□□□ -1.91
GRIN3BO60391 RNU6-588P-201ENST00000410281 105 ntBASIC3.13□□□□□ -1.91
GRIN3BO60391 CYCSP49-201ENST00000420810 319 ntBASIC3.13□□□□□ -1.91
GRIN3BO60391 AC104332.2-201ENST00000429959 156 ntBASIC3.13□□□□□ -1.91
GRIN3BO60391 Y_RNA.651-201ENST00000459380 103 ntBASIC3.13□□□□□ -1.91
GRIN3BO60391 AP004217.1-201ENST00000480579 346 ntBASIC3.13□□□□□ -1.91
GRIN3BO60391 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.13□□□□□ -1.91
GRIN3BO60391 MIR4438-201ENST00000585271 93 ntBASIC3.13□□□□□ -1.91
GRIN3BO60391 AC008264.2-201ENST00000610193 3731 ntBASIC3.13□□□□□ -1.91
GRIN3BO60391 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.12□□□□□ -1.91
GRIN3BO60391 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
GRIN3BO60391 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
GRIN3BO60391 RNU6-640P-201ENST00000363693 105 ntBASIC3.12□□□□□ -1.91
GRIN3BO60391 RNU4-13P-201ENST00000364019 141 ntBASIC3.12□□□□□ -1.91
GRIN3BO60391 U8.6-201ENST00000364939 135 ntBASIC3.12□□□□□ -1.91
GRIN3BO60391 RNU6-905P-201ENST00000384434 107 ntBASIC3.12□□□□□ -1.91
GRIN3BO60391 MIR181A2-201ENST00000384863 110 ntBASIC3.12□□□□□ -1.91
GRIN3BO60391 AL359511.1-201ENST00000402970 211 ntBASIC3.12□□□□□ -1.91
GRIN3BO60391 RNY4P30-201ENST00000410216 95 ntBASIC3.12□□□□□ -1.91
GRIN3BO60391 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.12□□□□□ -1.91
GRIN3BO60391 AC018868.1-201ENST00000491307 315 ntBASIC3.12□□□□□ -1.91
GRIN3BO60391 SNORA31.26-201ENST00000517250 137 ntBASIC3.12□□□□□ -1.91
GRIN3BO60391 AL021707.8-201ENST00000609428 183 ntBASIC3.12□□□□□ -1.91
GRIN3BO60391 AC008555.8-201ENST00000623602 2168 ntBASIC3.12□□□□□ -1.91
GRIN3BO60391 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.12□□□□□ -1.91
GRIN3BO60391 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
GRIN3BO60391 AC092881.1-201ENST00000638218 2733 ntBASIC3.12□□□□□ -1.91
GRIN3BO60391 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.11□□□□□ -1.91
GRIN3BO60391 SNORA64-201ENST00000384674 134 ntBASIC3.11□□□□□ -1.91
GRIN3BO60391 MIR181B1-201ENST00000385240 110 ntBASIC3.11□□□□□ -1.91
GRIN3BO60391 SNORD37.2-201ENST00000391075 66 ntBASIC3.11□□□□□ -1.91
GRIN3BO60391 AL512604.1-201ENST00000404812 257 ntBASIC3.11□□□□□ -1.91
GRIN3BO60391 Z96811.1-201ENST00000445880 108 ntBASIC3.11□□□□□ -1.91
GRIN3BO60391 RNA5SP281-201ENST00000516504 135 ntBASIC3.11□□□□□ -1.91
GRIN3BO60391 U6.73-201ENST00000619194 103 ntBASIC3.11□□□□□ -1.91
GRIN3BO60391 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
GRIN3BO60391 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
GRIN3BO60391 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
GRIN3BO60391 MIR337-201ENST00000362281 93 ntBASIC3.1□□□□□ -1.91
GRIN3BO60391 RNU6-1082P-201ENST00000364574 107 ntBASIC3.1□□□□□ -1.91
GRIN3BO60391 RNU6-32P-201ENST00000383948 107 ntBASIC3.1□□□□□ -1.91
GRIN3BO60391 RNU6-13P-201ENST00000384248 107 ntBASIC3.1□□□□□ -1.91
GRIN3BO60391 RNU6-12P-201ENST00000384604 107 ntBASIC3.1□□□□□ -1.91
GRIN3BO60391 RNU6-41P-201ENST00000384741 107 ntBASIC3.1□□□□□ -1.91
GRIN3BO60391 MIR489-201ENST00000384923 84 ntBASIC3.1□□□□□ -1.91
GRIN3BO60391 SRIP3-201ENST00000413200 219 ntBASIC3.1□□□□□ -1.91
GRIN3BO60391 RNU6-1146P-201ENST00000516282 102 ntBASIC3.1□□□□□ -1.91
GRIN3BO60391 RNU7-172P-201ENST00000517125 64 ntBASIC3.1□□□□□ -1.91
GRIN3BO60391 uc_338.28-201ENST00000612082 187 ntBASIC3.1□□□□□ -1.91
GRIN3BO60391 MIR6873-201ENST00000622788 63 ntBASIC3.1□□□□□ -1.91
GRIN3BO60391 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
GRIN3BO60391 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.91
GRIN3BO60391 AC003982.1-202ENST00000469928 248 ntBASIC3.09□□□□□ -1.91
GRIN3BO60391 Y_RNA.677-201ENST00000516401 85 ntBASIC3.09□□□□□ -1.91
GRIN3BO60391 RNU6-638P-201ENST00000516582 104 ntBASIC3.09□□□□□ -1.91
GRIN3BO60391 RNU6-667P-201ENST00000517186 102 ntBASIC3.09□□□□□ -1.91
GRIN3BO60391 MIR3646-201ENST00000578301 84 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms