Protein–RNA interactions for Protein: O60341

KDM1A, Lysine-specific histone demethylase 1A, humanhuman

Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1AO60341 RNU2-56P-201ENST00000516826 190 ntBASIC2.37□□□□□ -2.03
KDM1AO60341 MIR4513-201ENST00000581077 86 ntBASIC2.37□□□□□ -2.03
KDM1AO60341 MIR4435-1-201ENST00000582552 80 ntBASIC2.37□□□□□ -2.03
KDM1AO60341 MIR4672-201ENST00000583126 81 ntBASIC2.37□□□□□ -2.03
KDM1AO60341 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
KDM1AO60341 AL359851.1-201ENST00000569460 4997 ntBASIC2.36□□□□□ -2.03
KDM1AO60341 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
KDM1AO60341 Y_RNA.796-201ENST00000364268 102 ntBASIC2.36□□□□□ -2.03
KDM1AO60341 Y_RNA.253-201ENST00000364562 112 ntBASIC2.36□□□□□ -2.03
KDM1AO60341 RNU6-275P-201ENST00000364910 107 ntBASIC2.36□□□□□ -2.03
KDM1AO60341 Y_RNA.799-201ENST00000364992 102 ntBASIC2.36□□□□□ -2.03
KDM1AO60341 RNU1-51P-201ENST00000365345 176 ntBASIC2.36□□□□□ -2.03
KDM1AO60341 RNU6-578P-201ENST00000390980 103 ntBASIC2.36□□□□□ -2.03
KDM1AO60341 RN7SKP51-201ENST00000410781 304 ntBASIC2.36□□□□□ -2.03
KDM1AO60341 HMGN2P38-201ENST00000423806 265 ntBASIC2.36□□□□□ -2.03
KDM1AO60341 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.36□□□□□ -2.03
KDM1AO60341 UBE2DNL-203ENST00000474922 222 ntBASIC2.36□□□□□ -2.03
KDM1AO60341 AC074198.2-201ENST00000508153 258 ntBASIC2.36□□□□□ -2.03
KDM1AO60341 MIR514B-201ENST00000516774 80 ntBASIC2.36□□□□□ -2.03
KDM1AO60341 MRPS18CP4-201ENST00000535821 231 ntBASIC2.36□□□□□ -2.03
KDM1AO60341 RPL23AP91-201ENST00000569211 455 ntBASIC2.36□□□□□ -2.03
KDM1AO60341 JPX_2.1-201ENST00000614161 69 ntBASIC2.36□□□□□ -2.03
KDM1AO60341 U1.36-201ENST00000620684 176 ntBASIC2.36□□□□□ -2.03
KDM1AO60341 MIR1291-201ENST00000627649 87 ntBASIC2.36□□□□□ -2.03
KDM1AO60341 AC016717.2-201ENST00000609089 5141 ntBASIC2.36□□□□□ -2.03
KDM1AO60341 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
KDM1AO60341 RNU6-1209P-201ENST00000363655 107 ntBASIC2.35□□□□□ -2.03
KDM1AO60341 MT-TT-201ENST00000387460 66 ntBASIC2.35□□□□□ -2.03
KDM1AO60341 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
KDM1AO60341 RNU6-1228P-201ENST00000391014 107 ntBASIC2.35□□□□□ -2.03
KDM1AO60341 AL606845.1-201ENST00000404881 255 ntBASIC2.35□□□□□ -2.03
KDM1AO60341 AC234781.5-201ENST00000508429 271 ntBASIC2.35□□□□□ -2.03
KDM1AO60341 RNU2-19P-201ENST00000517288 84 ntBASIC2.35□□□□□ -2.03
KDM1AO60341 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.35□□□□□ -2.03
KDM1AO60341 SUB1P4-201ENST00000566062 339 ntBASIC2.35□□□□□ -2.03
KDM1AO60341 AC108706.1-201ENST00000611053 297 ntBASIC2.35□□□□□ -2.03
KDM1AO60341 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.35□□□□□ -2.03
KDM1AO60341 Y_RNA.23-201ENST00000362496 106 ntBASIC2.34□□□□□ -2.03
KDM1AO60341 SNORA63D-201ENST00000364359 132 ntBASIC2.34□□□□□ -2.03
KDM1AO60341 RNY3P5-201ENST00000384127 102 ntBASIC2.34□□□□□ -2.03
KDM1AO60341 SNORD23.1-201ENST00000408212 104 ntBASIC2.34□□□□□ -2.03
KDM1AO60341 SNORD11-201ENST00000459124 84 ntBASIC2.34□□□□□ -2.03
KDM1AO60341 HMGN1P7-201ENST00000491722 313 ntBASIC2.34□□□□□ -2.03
KDM1AO60341 AC109810.1-201ENST00000534066 224 ntBASIC2.34□□□□□ -2.03
KDM1AO60341 AC078899.2-201ENST00000595282 212 ntBASIC2.34□□□□□ -2.03
KDM1AO60341 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
KDM1AO60341 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
KDM1AO60341 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.33□□□□□ -2.04
KDM1AO60341 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
KDM1AO60341 RNU6-312P-201ENST00000364629 107 ntBASIC2.33□□□□□ -2.04
KDM1AO60341 MIR520A-201ENST00000384862 85 ntBASIC2.33□□□□□ -2.04
KDM1AO60341 RNU2-40P-201ENST00000410833 196 ntBASIC2.33□□□□□ -2.04
KDM1AO60341 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.33□□□□□ -2.04
KDM1AO60341 SNORA59A-201ENST00000459326 152 ntBASIC2.33□□□□□ -2.04
KDM1AO60341 AL049830.1-201ENST00000468034 425 ntBASIC2.33□□□□□ -2.04
KDM1AO60341 AC055731.1-201ENST00000474387 401 ntBASIC2.33□□□□□ -2.04
KDM1AO60341 AL591926.4-201ENST00000616895 298 ntBASIC2.33□□□□□ -2.04
KDM1AO60341 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.33□□□□□ -2.04
KDM1AO60341 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
KDM1AO60341 Y_RNA.464-201ENST00000384282 110 ntBASIC2.32□□□□□ -2.04
KDM1AO60341 SNRPGP10-201ENST00000432323 225 ntBASIC2.32□□□□□ -2.04
KDM1AO60341 AC023449.1-201ENST00000454464 154 ntBASIC2.32□□□□□ -2.04
KDM1AO60341 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.32□□□□□ -2.04
KDM1AO60341 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.32□□□□□ -2.04
KDM1AO60341 AL049861.1-201ENST00000603130 150 ntBASIC2.32□□□□□ -2.04
KDM1AO60341 AC103810.6-201ENST00000606708 136 ntBASIC2.32□□□□□ -2.04
KDM1AO60341 AC067747.1-201ENST00000608026 250 ntBASIC2.32□□□□□ -2.04
KDM1AO60341 MIR8054-201ENST00000620877 86 ntBASIC2.32□□□□□ -2.04
KDM1AO60341 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
KDM1AO60341 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
KDM1AO60341 RNU6-112P-201ENST00000363599 104 ntBASIC2.31□□□□□ -2.04
KDM1AO60341 RNU6-728P-201ENST00000365375 104 ntBASIC2.31□□□□□ -2.04
KDM1AO60341 RNU6-1062P-201ENST00000383908 107 ntBASIC2.31□□□□□ -2.04
KDM1AO60341 RNU5E-9P-201ENST00000411164 104 ntBASIC2.31□□□□□ -2.04
KDM1AO60341 AL356379.1-201ENST00000414105 126 ntBASIC2.31□□□□□ -2.04
KDM1AO60341 AC026436.1-201ENST00000510537 270 ntBASIC2.31□□□□□ -2.04
KDM1AO60341 AC002984.1-201ENST00000591692 448 ntBASIC2.31□□□□□ -2.04
KDM1AO60341 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.31□□□□□ -2.04
KDM1AO60341 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
KDM1AO60341 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
KDM1AO60341 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
KDM1AO60341 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.3□□□□□ -2.04
KDM1AO60341 MIRLET7G-201ENST00000362280 84 ntBASIC2.3□□□□□ -2.04
KDM1AO60341 MIR126-201ENST00000362291 85 ntBASIC2.3□□□□□ -2.04
KDM1AO60341 RNU4-82P-201ENST00000362443 140 ntBASIC2.3□□□□□ -2.04
KDM1AO60341 RNU6-296P-201ENST00000384608 107 ntBASIC2.3□□□□□ -2.04
KDM1AO60341 RNU6-950P-201ENST00000384651 107 ntBASIC2.3□□□□□ -2.04
KDM1AO60341 MIR15B-201ENST00000385045 98 ntBASIC2.3□□□□□ -2.04
KDM1AO60341 RNU6-440P-201ENST00000390882 105 ntBASIC2.3□□□□□ -2.04
KDM1AO60341 Y_RNA.587-201ENST00000391210 103 ntBASIC2.3□□□□□ -2.04
KDM1AO60341 RNA5SP508-201ENST00000411327 119 ntBASIC2.3□□□□□ -2.04
KDM1AO60341 AC005840.1-201ENST00000498412 377 ntBASIC2.3□□□□□ -2.04
KDM1AO60341 RNU6-1212P-201ENST00000517023 104 ntBASIC2.3□□□□□ -2.04
KDM1AO60341 RNA5SP437-201ENST00000517249 129 ntBASIC2.3□□□□□ -2.04
KDM1AO60341 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.3□□□□□ -2.04
KDM1AO60341 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.3□□□□□ -2.04
KDM1AO60341 uc_338.4-201ENST00000616635 176 ntBASIC2.3□□□□□ -2.04
KDM1AO60341 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
KDM1AO60341 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
KDM1AO60341 Y_RNA.265-201ENST00000364677 108 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms