Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 AC090049.2-201ENST00000550377 109 ntBASIC2.61□□□□□ -1.99
FOXN1O15353 MIR5007-201ENST00000583098 95 ntBASIC2.61□□□□□ -1.99
FOXN1O15353 AC008739.2-201ENST00000597006 317 ntBASIC2.61□□□□□ -1.99
FOXN1O15353 BX248123.2-201ENST00000606318 124 ntBASIC2.61□□□□□ -1.99
FOXN1O15353 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.61□□□□□ -1.99
FOXN1O15353 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.6□□□□□ -1.99
FOXN1O15353 SNORD45.3-201ENST00000363836 72 ntBASIC2.6□□□□□ -1.99
FOXN1O15353 RNU6-42P-201ENST00000384165 107 ntBASIC2.6□□□□□ -1.99
FOXN1O15353 SNORD116-13-201ENST00000384408 92 ntBASIC2.6□□□□□ -1.99
FOXN1O15353 RNU1-57P-201ENST00000384491 166 ntBASIC2.6□□□□□ -1.99
FOXN1O15353 AL355796.1-201ENST00000406706 323 ntBASIC2.6□□□□□ -1.99
FOXN1O15353 MIR1185-2-201ENST00000408687 86 ntBASIC2.6□□□□□ -1.99
FOXN1O15353 RNU4-62P-201ENST00000410125 130 ntBASIC2.6□□□□□ -1.99
FOXN1O15353 HMGN2P35-201ENST00000412164 270 ntBASIC2.6□□□□□ -1.99
FOXN1O15353 AL158823.1-201ENST00000418441 478 ntBASIC2.6□□□□□ -1.99
FOXN1O15353 RNU6-1337P-201ENST00000516525 95 ntBASIC2.6□□□□□ -1.99
FOXN1O15353 Y_RNA.709-201ENST00000516952 92 ntBASIC2.6□□□□□ -1.99
FOXN1O15353 CYCSP26-201ENST00000534107 320 ntBASIC2.6□□□□□ -1.99
FOXN1O15353 MIR3199-1-201ENST00000582434 88 ntBASIC2.6□□□□□ -1.99
FOXN1O15353 AC002984.1-201ENST00000591692 448 ntBASIC2.6□□□□□ -1.99
FOXN1O15353 AC120024.3-201ENST00000603167 156 ntBASIC2.6□□□□□ -1.99
FOXN1O15353 UCA1.1-201ENST00000620952 75 ntBASIC2.6□□□□□ -1.99
FOXN1O15353 CENPCP1-201ENST00000533085 2578 ntBASIC2.6□□□□□ -1.99
FOXN1O15353 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
FOXN1O15353 MTND5P32-201ENST00000560711 1802 ntBASIC2.59□□□□□ -1.99
FOXN1O15353 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
FOXN1O15353 RNY3P5-201ENST00000384127 102 ntBASIC2.59□□□□□ -1.99
FOXN1O15353 MIR586-201ENST00000385035 97 ntBASIC2.59□□□□□ -1.99
FOXN1O15353 RPL23AP7-203ENST00000449021 469 ntBASIC2.59□□□□□ -1.99
FOXN1O15353 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.59□□□□□ -1.99
FOXN1O15353 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.59□□□□□ -1.99
FOXN1O15353 MIR6504-201ENST00000613520 61 ntBASIC2.59□□□□□ -1.99
FOXN1O15353 RMST_2.1-201ENST00000617263 136 ntBASIC2.59□□□□□ -1.99
FOXN1O15353 ZNF720P1-201ENST00000562403 1939 ntBASIC2.59□□□□□ -1.99
FOXN1O15353 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.59□□□□□ -2
FOXN1O15353 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -2
FOXN1O15353 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.58□□□□□ -2
FOXN1O15353 Y_RNA.43-201ENST00000362670 111 ntBASIC2.58□□□□□ -2
FOXN1O15353 SNORA25.7-201ENST00000364375 127 ntBASIC2.58□□□□□ -2
FOXN1O15353 SNORA22-201ENST00000383907 134 ntBASIC2.58□□□□□ -2
FOXN1O15353 SNORA20B-201ENST00000384220 132 ntBASIC2.58□□□□□ -2
FOXN1O15353 AL445646.1-201ENST00000431784 216 ntBASIC2.58□□□□□ -2
FOXN1O15353 HMGN2P9-201ENST00000476875 229 ntBASIC2.58□□□□□ -2
FOXN1O15353 RNU6-1098P-201ENST00000516772 96 ntBASIC2.58□□□□□ -2
FOXN1O15353 SCARNA11.3-201ENST00000517276 130 ntBASIC2.58□□□□□ -2
FOXN1O15353 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.58□□□□□ -2
FOXN1O15353 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.58□□□□□ -2
FOXN1O15353 MTND5P34-201ENST00000568888 325 ntBASIC2.58□□□□□ -2
FOXN1O15353 MIR378D2-201ENST00000580636 98 ntBASIC2.58□□□□□ -2
FOXN1O15353 POLR3GP1-201ENST00000594073 261 ntBASIC2.58□□□□□ -2
FOXN1O15353 AP003357.1-201ENST00000604497 148 ntBASIC2.58□□□□□ -2
FOXN1O15353 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.58□□□□□ -2
FOXN1O15353 SNORD114-7-201ENST00000362520 77 ntBASIC2.57□□□□□ -2
FOXN1O15353 RNU6-597P-201ENST00000365620 102 ntBASIC2.57□□□□□ -2
FOXN1O15353 SNORA40.5-201ENST00000391061 128 ntBASIC2.57□□□□□ -2
FOXN1O15353 Y_RNA.584-201ENST00000391090 114 ntBASIC2.57□□□□□ -2
FOXN1O15353 SNORA40.18-201ENST00000391200 128 ntBASIC2.57□□□□□ -2
FOXN1O15353 Y_RNA.587-201ENST00000391210 103 ntBASIC2.57□□□□□ -2
FOXN1O15353 MIR873-201ENST00000401120 77 ntBASIC2.57□□□□□ -2
FOXN1O15353 SEM1P1-201ENST00000506694 209 ntBASIC2.57□□□□□ -2
FOXN1O15353 MRPS36P2-201ENST00000512569 299 ntBASIC2.57□□□□□ -2
FOXN1O15353 RNU6-589P-201ENST00000516485 107 ntBASIC2.57□□□□□ -2
FOXN1O15353 RNA5SP170-201ENST00000517150 101 ntBASIC2.57□□□□□ -2
FOXN1O15353 AC090142.3-201ENST00000519012 385 ntBASIC2.57□□□□□ -2
FOXN1O15353 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.57□□□□□ -2
FOXN1O15353 MIR3613-201ENST00000579844 87 ntBASIC2.57□□□□□ -2
FOXN1O15353 uc_338.14-201ENST00000613162 166 ntBASIC2.57□□□□□ -2
FOXN1O15353 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.57□□□□□ -2
FOXN1O15353 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
FOXN1O15353 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
FOXN1O15353 SNORD32B-201ENST00000364460 84 ntBASIC2.56□□□□□ -2
FOXN1O15353 SNORA68.1-201ENST00000364537 132 ntBASIC2.56□□□□□ -2
FOXN1O15353 RNU6-1323P-201ENST00000384025 107 ntBASIC2.56□□□□□ -2
FOXN1O15353 SNORD14D-201ENST00000384390 87 ntBASIC2.56□□□□□ -2
FOXN1O15353 RNA5SP492-201ENST00000411330 114 ntBASIC2.56□□□□□ -2
FOXN1O15353 POLR2J4-204ENST00000418424 324 ntBASIC2.56□□□□□ -2
FOXN1O15353 AL357134.1-201ENST00000445848 426 ntBASIC2.56□□□□□ -2
FOXN1O15353 SNORD13-201ENST00000459299 104 ntBASIC2.56□□□□□ -2
FOXN1O15353 RPL36AP48-201ENST00000485521 314 ntBASIC2.56□□□□□ -2
FOXN1O15353 RNU6-772P-201ENST00000516042 105 ntBASIC2.56□□□□□ -2
FOXN1O15353 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC2.56□□□□□ -2
FOXN1O15353 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.56□□□□□ -2
FOXN1O15353 MIR4679-2-201ENST00000578358 77 ntBASIC2.56□□□□□ -2
FOXN1O15353 AC108081.1-201ENST00000604358 221 ntBASIC2.56□□□□□ -2
FOXN1O15353 U2.20-201ENST00000613956 192 ntBASIC2.56□□□□□ -2
FOXN1O15353 MIR6766-201ENST00000622641 72 ntBASIC2.56□□□□□ -2
FOXN1O15353 MIR3914-2-201ENST00000637339 95 ntBASIC2.56□□□□□ -2
FOXN1O15353 AC005336.3-201ENST00000623833 2679 ntBASIC2.56□□□□□ -2
FOXN1O15353 AC138915.1-201ENST00000565427 1685 ntBASIC2.56□□□□□ -2
FOXN1O15353 SNORA27.1-201ENST00000362604 124 ntBASIC2.55□□□□□ -2
FOXN1O15353 RNU6-1255P-201ENST00000363434 112 ntBASIC2.55□□□□□ -2
FOXN1O15353 RNU6-755P-201ENST00000364400 103 ntBASIC2.55□□□□□ -2
FOXN1O15353 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
FOXN1O15353 AC016925.1-201ENST00000458303 298 ntBASIC2.55□□□□□ -2
FOXN1O15353 RNU6-437P-201ENST00000459408 95 ntBASIC2.55□□□□□ -2
FOXN1O15353 RNU7-57P-201ENST00000459540 60 ntBASIC2.55□□□□□ -2
FOXN1O15353 RPL23AP54-201ENST00000495129 419 ntBASIC2.55□□□□□ -2
FOXN1O15353 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.55□□□□□ -2
FOXN1O15353 RNU5E-3P-201ENST00000515913 68 ntBASIC2.55□□□□□ -2
FOXN1O15353 RNU5F-4P-201ENST00000516581 114 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms