Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 RNA5SP482-201ENST00000391269 118 ntBASIC1.55□□□□□ -2.16
SMAD9O15198 AL161935.2-201ENST00000414627 60 ntBASIC1.55□□□□□ -2.16
SMAD9O15198 PGBD4P5-201ENST00000445958 426 ntBASIC1.55□□□□□ -2.16
SMAD9O15198 RNU6-635P-201ENST00000516651 102 ntBASIC1.55□□□□□ -2.16
SMAD9O15198 RNU6-250P-201ENST00000516958 103 ntBASIC1.55□□□□□ -2.16
SMAD9O15198 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.55□□□□□ -2.16
SMAD9O15198 MIR4781-201ENST00000585250 76 ntBASIC1.55□□□□□ -2.16
SMAD9O15198 AC008737.2-201ENST00000599446 118 ntBASIC1.55□□□□□ -2.16
SMAD9O15198 AC037487.3-201ENST00000606668 112 ntBASIC1.55□□□□□ -2.16
SMAD9O15198 MIR8081-201ENST00000611533 95 ntBASIC1.55□□□□□ -2.16
SMAD9O15198 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
SMAD9O15198 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
SMAD9O15198 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
SMAD9O15198 Y_RNA.136-201ENST00000363444 102 ntBASIC1.54□□□□□ -2.16
SMAD9O15198 Y_RNA.145-201ENST00000363527 102 ntBASIC1.54□□□□□ -2.16
SMAD9O15198 SNORA63C-201ENST00000364578 129 ntBASIC1.54□□□□□ -2.16
SMAD9O15198 RNA5SP190-201ENST00000365222 118 ntBASIC1.54□□□□□ -2.16
SMAD9O15198 RNU6-713P-201ENST00000384761 107 ntBASIC1.54□□□□□ -2.16
SMAD9O15198 MIR513A1-201ENST00000385138 129 ntBASIC1.54□□□□□ -2.16
SMAD9O15198 AL627390.1-201ENST00000396055 340 ntBASIC1.54□□□□□ -2.16
SMAD9O15198 AL135790.2-201ENST00000437701 267 ntBASIC1.54□□□□□ -2.16
SMAD9O15198 OR9P1P-201ENST00000496431 281 ntBASIC1.54□□□□□ -2.16
SMAD9O15198 RNU6-191P-201ENST00000516295 94 ntBASIC1.54□□□□□ -2.16
SMAD9O15198 RNU6-970P-201ENST00000516312 107 ntBASIC1.54□□□□□ -2.16
SMAD9O15198 MIR3618-201ENST00000580330 88 ntBASIC1.54□□□□□ -2.16
SMAD9O15198 AL513423.1-201ENST00000621695 132 ntBASIC1.54□□□□□ -2.16
SMAD9O15198 RNU6-238P-201ENST00000363313 106 ntBASIC1.53□□□□□ -2.16
SMAD9O15198 RNU4-41P-201ENST00000364426 143 ntBASIC1.53□□□□□ -2.16
SMAD9O15198 RNA5SP259-201ENST00000365541 109 ntBASIC1.53□□□□□ -2.16
SMAD9O15198 RNU6-514P-201ENST00000384208 107 ntBASIC1.53□□□□□ -2.16
SMAD9O15198 SNORA72-201ENST00000384339 132 ntBASIC1.53□□□□□ -2.16
SMAD9O15198 RNU6-1109P-201ENST00000391187 107 ntBASIC1.53□□□□□ -2.16
SMAD9O15198 CALM2P4-201ENST00000430810 426 ntBASIC1.53□□□□□ -2.16
SMAD9O15198 MTCO1P5-201ENST00000433573 344 ntBASIC1.53□□□□□ -2.16
SMAD9O15198 MTND5P22-201ENST00000458380 195 ntBASIC1.53□□□□□ -2.16
SMAD9O15198 SNORD13-201ENST00000459299 104 ntBASIC1.53□□□□□ -2.16
SMAD9O15198 RNU7-116P-201ENST00000516940 62 ntBASIC1.53□□□□□ -2.16
SMAD9O15198 RNU2-31P-201ENST00000516954 155 ntBASIC1.53□□□□□ -2.16
SMAD9O15198 RNU6-570P-201ENST00000517051 105 ntBASIC1.53□□□□□ -2.16
SMAD9O15198 SUMO2P16-201ENST00000519475 264 ntBASIC1.53□□□□□ -2.16
SMAD9O15198 AC136628.3-201ENST00000521868 290 ntBASIC1.53□□□□□ -2.16
SMAD9O15198 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.53□□□□□ -2.16
SMAD9O15198 AL512605.2-201ENST00000592972 256 ntBASIC1.53□□□□□ -2.16
SMAD9O15198 POLR3GP1-201ENST00000594073 261 ntBASIC1.53□□□□□ -2.16
SMAD9O15198 SNORD3E-202ENST00000627253 216 ntBASIC1.53□□□□□ -2.16
SMAD9O15198 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
SMAD9O15198 MIR337-201ENST00000362281 93 ntBASIC1.52□□□□□ -2.17
SMAD9O15198 SNORA25.1-201ENST00000362326 128 ntBASIC1.52□□□□□ -2.17
SMAD9O15198 Y_RNA.84-201ENST00000363011 104 ntBASIC1.52□□□□□ -2.17
SMAD9O15198 SNORD68-201ENST00000363214 84 ntBASIC1.52□□□□□ -2.17
SMAD9O15198 SNORD48-201ENST00000364953 64 ntBASIC1.52□□□□□ -2.17
SMAD9O15198 RNU6-1323P-201ENST00000384025 107 ntBASIC1.52□□□□□ -2.17
SMAD9O15198 Y_RNA.459-201ENST00000384251 102 ntBASIC1.52□□□□□ -2.17
SMAD9O15198 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.52□□□□□ -2.17
SMAD9O15198 MTND4LP30-201ENST00000454092 297 ntBASIC1.52□□□□□ -2.17
SMAD9O15198 AC117454.1-201ENST00000491120 168 ntBASIC1.52□□□□□ -2.17
SMAD9O15198 RNA5SP168-201ENST00000516642 112 ntBASIC1.52□□□□□ -2.17
SMAD9O15198 AC019176.1-201ENST00000518519 225 ntBASIC1.52□□□□□ -2.17
SMAD9O15198 AC015688.6-201ENST00000577737 104 ntBASIC1.52□□□□□ -2.17
SMAD9O15198 AP001485.1-201ENST00000604799 199 ntBASIC1.52□□□□□ -2.17
SMAD9O15198 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
SMAD9O15198 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.52□□□□□ -2.17
SMAD9O15198 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
SMAD9O15198 Y_RNA.16-201ENST00000362421 102 ntBASIC1.51□□□□□ -2.17
SMAD9O15198 RNU6-1048P-201ENST00000364054 107 ntBASIC1.51□□□□□ -2.17
SMAD9O15198 U8.7-201ENST00000364940 136 ntBASIC1.51□□□□□ -2.17
SMAD9O15198 SNORD1A-201ENST00000364968 72 ntBASIC1.51□□□□□ -2.17
SMAD9O15198 RNU6-738P-201ENST00000384531 106 ntBASIC1.51□□□□□ -2.17
SMAD9O15198 RNU6-1105P-201ENST00000384774 107 ntBASIC1.51□□□□□ -2.17
SMAD9O15198 U8.16-201ENST00000391279 133 ntBASIC1.51□□□□□ -2.17
SMAD9O15198 AC104332.1-201ENST00000440471 797 ntBASIC1.51□□□□□ -2.17
SMAD9O15198 Z98949.2-201ENST00000440996 144 ntBASIC1.51□□□□□ -2.17
SMAD9O15198 RNU1-98P-201ENST00000458992 160 ntBASIC1.51□□□□□ -2.17
SMAD9O15198 RPL23AP54-201ENST00000495129 419 ntBASIC1.51□□□□□ -2.17
SMAD9O15198 AC024405.2-202ENST00000532731 184 ntBASIC1.51□□□□□ -2.17
SMAD9O15198 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.51□□□□□ -2.17
SMAD9O15198 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.51□□□□□ -2.17
SMAD9O15198 MIR4255-201ENST00000579351 72 ntBASIC1.51□□□□□ -2.17
SMAD9O15198 AL360085.1-201ENST00000604713 532 ntBASIC1.51□□□□□ -2.17
SMAD9O15198 snoU13.31-201ENST00000607291 104 ntBASIC1.51□□□□□ -2.17
SMAD9O15198 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.51□□□□□ -2.17
SMAD9O15198 AL591926.4-201ENST00000616895 298 ntBASIC1.51□□□□□ -2.17
SMAD9O15198 MIR548AY-201ENST00000617669 107 ntBASIC1.51□□□□□ -2.17
SMAD9O15198 AC007742.2-201ENST00000618226 398 ntBASIC1.51□□□□□ -2.17
SMAD9O15198 RNU6-457P-201ENST00000363999 107 ntBASIC1.5□□□□□ -2.17
SMAD9O15198 RNU6-801P-201ENST00000364087 105 ntBASIC1.5□□□□□ -2.17
SMAD9O15198 Y_RNA.226-201ENST00000364337 114 ntBASIC1.5□□□□□ -2.17
SMAD9O15198 RNU6-326P-201ENST00000365480 107 ntBASIC1.5□□□□□ -2.17
SMAD9O15198 RNU6-424P-201ENST00000384367 105 ntBASIC1.5□□□□□ -2.17
SMAD9O15198 Y_RNA.512-201ENST00000384518 102 ntBASIC1.5□□□□□ -2.17
SMAD9O15198 MIR660-201ENST00000385235 97 ntBASIC1.5□□□□□ -2.17
SMAD9O15198 SNORA17.3-201ENST00000391159 129 ntBASIC1.5□□□□□ -2.17
SMAD9O15198 RPL30P13-201ENST00000418873 348 ntBASIC1.5□□□□□ -2.17
SMAD9O15198 AC079140.2-201ENST00000506193 142 ntBASIC1.5□□□□□ -2.17
SMAD9O15198 RNU7-115P-201ENST00000516433 55 ntBASIC1.5□□□□□ -2.17
SMAD9O15198 AC008269.2-201ENST00000561915 1105 ntBASIC1.5□□□□□ -2.17
SMAD9O15198 MIR4778-201ENST00000577635 80 ntBASIC1.5□□□□□ -2.17
SMAD9O15198 AP003357.1-201ENST00000604497 148 ntBASIC1.5□□□□□ -2.17
SMAD9O15198 PRR13P7-201ENST00000605538 430 ntBASIC1.5□□□□□ -2.17
SMAD9O15198 AC134026.1-201ENST00000623249 2239 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 180.5 ms