Protein–RNA interactions for Protein: A4FU49

SH3D21, SH3 domain-containing protein 21, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21A4FU49 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.67□□□□□ -1.98
SH3D21A4FU49 RN7SL297P-201ENST00000483161 293 ntBASIC2.67□□□□□ -1.98
SH3D21A4FU49 RPS29P24-201ENST00000486345 171 ntBASIC2.67□□□□□ -1.98
SH3D21A4FU49 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.67□□□□□ -1.98
SH3D21A4FU49 SNORA4.4-201ENST00000515921 135 ntBASIC2.67□□□□□ -1.98
SH3D21A4FU49 SCARNA11.3-201ENST00000517276 130 ntBASIC2.67□□□□□ -1.98
SH3D21A4FU49 AC107016.2-201ENST00000547968 190 ntBASIC2.67□□□□□ -1.98
SH3D21A4FU49 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.67□□□□□ -1.98
SH3D21A4FU49 MIR3199-1-201ENST00000582434 88 ntBASIC2.67□□□□□ -1.98
SH3D21A4FU49 AC073413.2-201ENST00000604332 360 ntBASIC2.67□□□□□ -1.98
SH3D21A4FU49 AL033523.1-201ENST00000605153 153 ntBASIC2.67□□□□□ -1.98
SH3D21A4FU49 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SH3D21A4FU49 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SH3D21A4FU49 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.66□□□□□ -1.98
SH3D21A4FU49 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SH3D21A4FU49 Y_RNA.528-201ENST00000384575 108 ntBASIC2.66□□□□□ -1.98
SH3D21A4FU49 SNORA12.1-201ENST00000390873 148 ntBASIC2.66□□□□□ -1.98
SH3D21A4FU49 RNY4P30-201ENST00000410216 95 ntBASIC2.66□□□□□ -1.98
SH3D21A4FU49 AL445687.1-201ENST00000439946 251 ntBASIC2.66□□□□□ -1.98
SH3D21A4FU49 AC233266.1-201ENST00000454518 96 ntBASIC2.66□□□□□ -1.98
SH3D21A4FU49 MRPS17P9-201ENST00000511924 393 ntBASIC2.66□□□□□ -1.98
SH3D21A4FU49 RNU6-991P-201ENST00000516168 107 ntBASIC2.66□□□□□ -1.98
SH3D21A4FU49 SNORA9.3-201ENST00000516383 129 ntBASIC2.66□□□□□ -1.98
SH3D21A4FU49 Y_RNA.677-201ENST00000516401 85 ntBASIC2.66□□□□□ -1.98
SH3D21A4FU49 RNU6-1270P-201ENST00000517128 108 ntBASIC2.66□□□□□ -1.98
SH3D21A4FU49 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.66□□□□□ -1.98
SH3D21A4FU49 AL049779.4-201ENST00000604500 156 ntBASIC2.66□□□□□ -1.98
SH3D21A4FU49 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.66□□□□□ -1.98
SH3D21A4FU49 AC242852.1-201ENST00000612151 96 ntBASIC2.66□□□□□ -1.98
SH3D21A4FU49 AC244015.1-201ENST00000622301 99 ntBASIC2.66□□□□□ -1.98
SH3D21A4FU49 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
SH3D21A4FU49 AC080128.1-201ENST00000474389 1917 ntBASIC2.66□□□□□ -1.98
SH3D21A4FU49 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
SH3D21A4FU49 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.65□□□□□ -1.98
SH3D21A4FU49 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
SH3D21A4FU49 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.98
SH3D21A4FU49 MIR512-1-201ENST00000384913 84 ntBASIC2.65□□□□□ -1.99
SH3D21A4FU49 MIR520G-201ENST00000385064 90 ntBASIC2.65□□□□□ -1.99
SH3D21A4FU49 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.65□□□□□ -1.99
SH3D21A4FU49 NDUFA4P2-201ENST00000489989 244 ntBASIC2.65□□□□□ -1.99
SH3D21A4FU49 CKS1BP2-201ENST00000497342 240 ntBASIC2.65□□□□□ -1.99
SH3D21A4FU49 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.65□□□□□ -1.99
SH3D21A4FU49 AC004486.1-201ENST00000546846 233 ntBASIC2.65□□□□□ -1.99
SH3D21A4FU49 MIR5194-201ENST00000582634 120 ntBASIC2.65□□□□□ -1.99
SH3D21A4FU49 AC006023.1-201ENST00000603944 259 ntBASIC2.65□□□□□ -1.99
SH3D21A4FU49 U2.20-201ENST00000613956 192 ntBASIC2.65□□□□□ -1.99
SH3D21A4FU49 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.65□□□□□ -1.99
SH3D21A4FU49 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.65□□□□□ -1.99
SH3D21A4FU49 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
SH3D21A4FU49 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
SH3D21A4FU49 RNA5SP125-201ENST00000364843 120 ntBASIC2.64□□□□□ -1.99
SH3D21A4FU49 MIR592-201ENST00000384959 97 ntBASIC2.64□□□□□ -1.99
SH3D21A4FU49 SNRPGP10-201ENST00000432323 225 ntBASIC2.64□□□□□ -1.99
SH3D21A4FU49 AC018634.1-201ENST00000437554 401 ntBASIC2.64□□□□□ -1.99
SH3D21A4FU49 AL161788.1-201ENST00000441805 169 ntBASIC2.64□□□□□ -1.99
SH3D21A4FU49 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC2.64□□□□□ -1.99
SH3D21A4FU49 HMGN1P7-201ENST00000491722 313 ntBASIC2.64□□□□□ -1.99
SH3D21A4FU49 SCARNA3-201ENST00000517097 143 ntBASIC2.64□□□□□ -1.99
SH3D21A4FU49 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.64□□□□□ -1.99
SH3D21A4FU49 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
SH3D21A4FU49 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
SH3D21A4FU49 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
SH3D21A4FU49 SNORD61-201ENST00000384252 73 ntBASIC2.63□□□□□ -1.99
SH3D21A4FU49 SNORD72-201ENST00000390994 80 ntBASIC2.63□□□□□ -1.99
SH3D21A4FU49 AC007064.1-201ENST00000412238 351 ntBASIC2.63□□□□□ -1.99
SH3D21A4FU49 AC123900.1-201ENST00000420390 96 ntBASIC2.63□□□□□ -1.99
SH3D21A4FU49 AC060773.1-201ENST00000421698 310 ntBASIC2.63□□□□□ -1.99
SH3D21A4FU49 AL139132.1-201ENST00000431587 344 ntBASIC2.63□□□□□ -1.99
SH3D21A4FU49 RPS15AP28-201ENST00000435088 386 ntBASIC2.63□□□□□ -1.99
SH3D21A4FU49 SCGB1D5P-201ENST00000515134 247 ntBASIC2.63□□□□□ -1.99
SH3D21A4FU49 RNA5SP236-201ENST00000516169 116 ntBASIC2.63□□□□□ -1.99
SH3D21A4FU49 RNU6-412P-201ENST00000516434 106 ntBASIC2.63□□□□□ -1.99
SH3D21A4FU49 RNU6-1291P-201ENST00000516591 104 ntBASIC2.63□□□□□ -1.99
SH3D21A4FU49 RNU6-856P-201ENST00000516959 98 ntBASIC2.63□□□□□ -1.99
SH3D21A4FU49 GTF3AP2-201ENST00000557014 266 ntBASIC2.63□□□□□ -1.99
SH3D21A4FU49 MIR3605-201ENST00000583214 100 ntBASIC2.63□□□□□ -1.99
SH3D21A4FU49 AC022217.4-201ENST00000604389 163 ntBASIC2.63□□□□□ -1.99
SH3D21A4FU49 MIR5739-201ENST00000619803 80 ntBASIC2.63□□□□□ -1.99
SH3D21A4FU49 AC106754.2-201ENST00000623006 233 ntBASIC2.63□□□□□ -1.99
SH3D21A4FU49 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.63□□□□□ -1.99
SH3D21A4FU49 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.62□□□□□ -1.99
SH3D21A4FU49 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.62□□□□□ -1.99
SH3D21A4FU49 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SH3D21A4FU49 RNU1-23P-201ENST00000363361 144 ntBASIC2.62□□□□□ -1.99
SH3D21A4FU49 Y_RNA.253-201ENST00000364562 112 ntBASIC2.62□□□□□ -1.99
SH3D21A4FU49 RNU6-1107P-201ENST00000364817 104 ntBASIC2.62□□□□□ -1.99
SH3D21A4FU49 RNU6-106P-201ENST00000384405 107 ntBASIC2.62□□□□□ -1.99
SH3D21A4FU49 RNU6-554P-201ENST00000410466 106 ntBASIC2.62□□□□□ -1.99
SH3D21A4FU49 CALM2P4-201ENST00000430810 426 ntBASIC2.62□□□□□ -1.99
SH3D21A4FU49 AC093259.1-201ENST00000509755 300 ntBASIC2.62□□□□□ -1.99
SH3D21A4FU49 AC091826.1-201ENST00000514065 313 ntBASIC2.62□□□□□ -1.99
SH3D21A4FU49 Y_RNA.666-201ENST00000516187 112 ntBASIC2.62□□□□□ -1.99
SH3D21A4FU49 RNA5SP367-201ENST00000516557 118 ntBASIC2.62□□□□□ -1.99
SH3D21A4FU49 RNU6-1149P-201ENST00000516810 97 ntBASIC2.62□□□□□ -1.99
SH3D21A4FU49 AC007012.1-201ENST00000567192 175 ntBASIC2.62□□□□□ -1.99
SH3D21A4FU49 ELOCP29-201ENST00000588193 334 ntBASIC2.62□□□□□ -1.99
SH3D21A4FU49 AL356280.1-201ENST00000603614 379 ntBASIC2.62□□□□□ -1.99
SH3D21A4FU49 Y_RNA.267-201ENST00000364679 109 ntBASIC2.61□□□□□ -1.99
SH3D21A4FU49 SNORA9.2-201ENST00000365361 133 ntBASIC2.61□□□□□ -1.99
SH3D21A4FU49 RNU6-1292P-201ENST00000383856 107 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms