Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PCDHGA4Q9Y5G9 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
PCDHGA4Q9Y5G9 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PCDHGA4Q9Y5G9 RNA5SP130-201ENST00000364431 114 ntBASIC4.07□□□□□ -1.76
PCDHGA4Q9Y5G9 SNORA32-201ENST00000384072 121 ntBASIC4.07□□□□□ -1.76
PCDHGA4Q9Y5G9 U8.11-201ENST00000384699 133 ntBASIC4.07□□□□□ -1.76
PCDHGA4Q9Y5G9 SNORA11.1-201ENST00000408133 129 ntBASIC4.07□□□□□ -1.76
PCDHGA4Q9Y5G9 MIR1267-201ENST00000408723 78 ntBASIC4.07□□□□□ -1.76
PCDHGA4Q9Y5G9 RPS29P7-201ENST00000439662 171 ntBASIC4.07□□□□□ -1.76
PCDHGA4Q9Y5G9 U8.18-201ENST00000459285 133 ntBASIC4.07□□□□□ -1.76
PCDHGA4Q9Y5G9 RNU7-34P-201ENST00000459394 64 ntBASIC4.07□□□□□ -1.76
PCDHGA4Q9Y5G9 AC114811.1-201ENST00000507207 168 ntBASIC4.07□□□□□ -1.76
PCDHGA4Q9Y5G9 RNU6-523P-201ENST00000516304 54 ntBASIC4.07□□□□□ -1.76
PCDHGA4Q9Y5G9 RNU6-539P-201ENST00000516665 103 ntBASIC4.07□□□□□ -1.76
PCDHGA4Q9Y5G9 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC4.07□□□□□ -1.76
PCDHGA4Q9Y5G9 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.07□□□□□ -1.76
PCDHGA4Q9Y5G9 MIR5739-201ENST00000619803 80 ntBASIC4.07□□□□□ -1.76
PCDHGA4Q9Y5G9 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.07□□□□□ -1.76
PCDHGA4Q9Y5G9 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC4.06□□□□□ -1.76
PCDHGA4Q9Y5G9 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PCDHGA4Q9Y5G9 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PCDHGA4Q9Y5G9 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
PCDHGA4Q9Y5G9 RNU6-1094P-201ENST00000362416 104 ntBASIC4.06□□□□□ -1.76
PCDHGA4Q9Y5G9 RNA5SP387-201ENST00000364226 106 ntBASIC4.06□□□□□ -1.76
PCDHGA4Q9Y5G9 Y_RNA.567-201ENST00000384736 106 ntBASIC4.06□□□□□ -1.76
PCDHGA4Q9Y5G9 RNU6-129P-201ENST00000391022 107 ntBASIC4.06□□□□□ -1.76
PCDHGA4Q9Y5G9 RNU6ATAC41P-201ENST00000408600 126 ntBASIC4.06□□□□□ -1.76
PCDHGA4Q9Y5G9 MIR1179-201ENST00000408703 91 ntBASIC4.06□□□□□ -1.76
PCDHGA4Q9Y5G9 RNU6ATAC-201ENST00000408749 126 ntBASIC4.06□□□□□ -1.76
PCDHGA4Q9Y5G9 RNA5SP261-201ENST00000410536 106 ntBASIC4.06□□□□□ -1.76
PCDHGA4Q9Y5G9 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.05□□□□□ -1.76
PCDHGA4Q9Y5G9 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
PCDHGA4Q9Y5G9 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PCDHGA4Q9Y5G9 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PCDHGA4Q9Y5G9 MIR208A-201ENST00000362287 71 ntBASIC4.05□□□□□ -1.76
PCDHGA4Q9Y5G9 RNU6-163P-201ENST00000384396 106 ntBASIC4.05□□□□□ -1.76
PCDHGA4Q9Y5G9 SRIP3-201ENST00000413200 219 ntBASIC4.05□□□□□ -1.76
PCDHGA4Q9Y5G9 TRIAP1P1-201ENST00000427062 225 ntBASIC4.05□□□□□ -1.76
PCDHGA4Q9Y5G9 RPS29P28-201ENST00000446439 141 ntBASIC4.05□□□□□ -1.76
PCDHGA4Q9Y5G9 AC125388.1-201ENST00000459631 156 ntBASIC4.05□□□□□ -1.76
PCDHGA4Q9Y5G9 TRBV12-1-201ENST00000479785 344 ntBASIC4.05□□□□□ -1.76
PCDHGA4Q9Y5G9 SCARNA11.3-201ENST00000517276 130 ntBASIC4.05□□□□□ -1.76
PCDHGA4Q9Y5G9 5S_rRNA.12-201ENST00000617631 107 ntBASIC4.05□□□□□ -1.76
PCDHGA4Q9Y5G9 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PCDHGA4Q9Y5G9 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PCDHGA4Q9Y5G9 Z83843.1-201ENST00000604070 3685 ntBASIC4.05□□□□□ -1.76
PCDHGA4Q9Y5G9 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
PCDHGA4Q9Y5G9 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PCDHGA4Q9Y5G9 SNORA71.3-201ENST00000362582 128 ntBASIC4.04□□□□□ -1.76
PCDHGA4Q9Y5G9 RNU1-23P-201ENST00000363361 144 ntBASIC4.04□□□□□ -1.76
PCDHGA4Q9Y5G9 RNU6-613P-201ENST00000410412 108 ntBASIC4.04□□□□□ -1.76
PCDHGA4Q9Y5G9 ATP5J2P3-201ENST00000451550 258 ntBASIC4.04□□□□□ -1.76
PCDHGA4Q9Y5G9 RPS29P19-201ENST00000479709 171 ntBASIC4.04□□□□□ -1.76
PCDHGA4Q9Y5G9 RN7SL297P-201ENST00000483161 293 ntBASIC4.04□□□□□ -1.76
PCDHGA4Q9Y5G9 AC025554.1-201ENST00000505641 188 ntBASIC4.04□□□□□ -1.76
PCDHGA4Q9Y5G9 SNORA31.1-201ENST00000515993 133 ntBASIC4.04□□□□□ -1.76
PCDHGA4Q9Y5G9 SNORA31.5-201ENST00000516190 133 ntBASIC4.04□□□□□ -1.76
PCDHGA4Q9Y5G9 RNU7-181P-201ENST00000517234 74 ntBASIC4.04□□□□□ -1.76
PCDHGA4Q9Y5G9 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC4.04□□□□□ -1.76
PCDHGA4Q9Y5G9 MIR3944-201ENST00000581277 108 ntBASIC4.04□□□□□ -1.76
PCDHGA4Q9Y5G9 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PCDHGA4Q9Y5G9 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
PCDHGA4Q9Y5G9 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PCDHGA4Q9Y5G9 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
PCDHGA4Q9Y5G9 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PCDHGA4Q9Y5G9 SNORA70.7-201ENST00000384159 133 ntBASIC4.03□□□□□ -1.76
PCDHGA4Q9Y5G9 RN7SKP192-201ENST00000411291 327 ntBASIC4.03□□□□□ -1.76
PCDHGA4Q9Y5G9 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PCDHGA4Q9Y5G9 MICF-203ENST00000432679 129 ntBASIC4.03□□□□□ -1.76
PCDHGA4Q9Y5G9 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC4.03□□□□□ -1.76
PCDHGA4Q9Y5G9 CYP2C59P-201ENST00000457790 269 ntBASIC4.03□□□□□ -1.76
PCDHGA4Q9Y5G9 CKS1BP2-201ENST00000497342 240 ntBASIC4.03□□□□□ -1.76
PCDHGA4Q9Y5G9 RN7SL636P-201ENST00000497504 294 ntBASIC4.03□□□□□ -1.76
PCDHGA4Q9Y5G9 AC099522.1-202ENST00000514718 367 ntBASIC4.03□□□□□ -1.76
PCDHGA4Q9Y5G9 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.03□□□□□ -1.76
PCDHGA4Q9Y5G9 AC008739.3-201ENST00000603262 127 ntBASIC4.03□□□□□ -1.76
PCDHGA4Q9Y5G9 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PCDHGA4Q9Y5G9 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.02□□□□□ -1.77
PCDHGA4Q9Y5G9 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
PCDHGA4Q9Y5G9 SNORD46.1-201ENST00000364139 104 ntBASIC4.02□□□□□ -1.77
PCDHGA4Q9Y5G9 MIR200C-201ENST00000384980 68 ntBASIC4.02□□□□□ -1.77
PCDHGA4Q9Y5G9 MIR95-201ENST00000385072 81 ntBASIC4.02□□□□□ -1.77
PCDHGA4Q9Y5G9 FO393413.1-201ENST00000402892 195 ntBASIC4.02□□□□□ -1.77
PCDHGA4Q9Y5G9 RNU2-48P-201ENST00000410694 191 ntBASIC4.02□□□□□ -1.77
PCDHGA4Q9Y5G9 CST2P1-201ENST00000425770 87 ntBASIC4.02□□□□□ -1.77
PCDHGA4Q9Y5G9 RNA5SP246-201ENST00000458909 119 ntBASIC4.02□□□□□ -1.77
PCDHGA4Q9Y5G9 RNU1-98P-201ENST00000458992 160 ntBASIC4.02□□□□□ -1.77
PCDHGA4Q9Y5G9 AC026726.1-201ENST00000512859 601 ntBASIC4.02□□□□□ -1.77
PCDHGA4Q9Y5G9 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHGA4Q9Y5G9 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
PCDHGA4Q9Y5G9 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
PCDHGA4Q9Y5G9 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
PCDHGA4Q9Y5G9 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
PCDHGA4Q9Y5G9 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PCDHGA4Q9Y5G9 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC4.01□□□□□ -1.77
PCDHGA4Q9Y5G9 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.01□□□□□ -1.77
PCDHGA4Q9Y5G9 MIR218-1-201ENST00000384999 110 ntBASIC4.01□□□□□ -1.77
PCDHGA4Q9Y5G9 MIR548G-201ENST00000408442 89 ntBASIC4.01□□□□□ -1.77
PCDHGA4Q9Y5G9 AC245047.3-201ENST00000429428 127 ntBASIC4.01□□□□□ -1.77
PCDHGA4Q9Y5G9 AC015922.2-201ENST00000435593 184 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms