Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 Y_RNA.71-201ENST00000362892 104 ntBASIC2.49□□□□□ -2.01
CDC42EP3Q9UKI2 Y_RNA.634-201ENST00000364811 113 ntBASIC2.49□□□□□ -2.01
CDC42EP3Q9UKI2 MIR515-2-201ENST00000384883 83 ntBASIC2.49□□□□□ -2.01
CDC42EP3Q9UKI2 MIR515-1-201ENST00000384884 83 ntBASIC2.49□□□□□ -2.01
CDC42EP3Q9UKI2 RNU6-460P-201ENST00000391158 108 ntBASIC2.49□□□□□ -2.01
CDC42EP3Q9UKI2 ATP5J2P3-201ENST00000451550 258 ntBASIC2.49□□□□□ -2.01
CDC42EP3Q9UKI2 NDUFA4P2-201ENST00000489989 244 ntBASIC2.49□□□□□ -2.01
CDC42EP3Q9UKI2 RN7SKP43-201ENST00000516173 320 ntBASIC2.49□□□□□ -2.01
CDC42EP3Q9UKI2 AC024995.1-201ENST00000523014 93 ntBASIC2.49□□□□□ -2.01
CDC42EP3Q9UKI2 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.49□□□□□ -2.01
CDC42EP3Q9UKI2 MIR4662B-201ENST00000579498 81 ntBASIC2.49□□□□□ -2.01
CDC42EP3Q9UKI2 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.49□□□□□ -2.01
CDC42EP3Q9UKI2 ZNF271P-202ENST00000465539 1970 ntBASIC2.49□□□□□ -2.01
CDC42EP3Q9UKI2 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.48□□□□□ -2.01
CDC42EP3Q9UKI2 AC062016.1-201ENST00000355719 319 ntBASIC2.48□□□□□ -2.01
CDC42EP3Q9UKI2 RNU6-1290P-201ENST00000362957 109 ntBASIC2.48□□□□□ -2.01
CDC42EP3Q9UKI2 Y_RNA.127-201ENST00000363386 109 ntBASIC2.48□□□□□ -2.01
CDC42EP3Q9UKI2 RNA5SP205-201ENST00000364653 136 ntBASIC2.48□□□□□ -2.01
CDC42EP3Q9UKI2 RNU6-1180P-201ENST00000364935 107 ntBASIC2.48□□□□□ -2.01
CDC42EP3Q9UKI2 MIR196B-201ENST00000384852 84 ntBASIC2.48□□□□□ -2.01
CDC42EP3Q9UKI2 MTATP6P29-201ENST00000415057 132 ntBASIC2.48□□□□□ -2.01
CDC42EP3Q9UKI2 CST2P1-201ENST00000425770 87 ntBASIC2.48□□□□□ -2.01
CDC42EP3Q9UKI2 AC104389.3-201ENST00000445629 235 ntBASIC2.48□□□□□ -2.01
CDC42EP3Q9UKI2 OR9P1P-201ENST00000496431 281 ntBASIC2.48□□□□□ -2.01
CDC42EP3Q9UKI2 SCGB1D5P-201ENST00000515134 247 ntBASIC2.48□□□□□ -2.01
CDC42EP3Q9UKI2 AC091544.4-201ENST00000555268 342 ntBASIC2.48□□□□□ -2.01
CDC42EP3Q9UKI2 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.48□□□□□ -2.01
CDC42EP3Q9UKI2 MIR6733-201ENST00000635723 61 ntBASIC2.48□□□□□ -2.01
CDC42EP3Q9UKI2 Y_RNA.91-201ENST00000363042 107 ntBASIC2.47□□□□□ -2.01
CDC42EP3Q9UKI2 SNORA33-201ENST00000363664 130 ntBASIC2.47□□□□□ -2.01
CDC42EP3Q9UKI2 RNA5SP493-201ENST00000364115 91 ntBASIC2.47□□□□□ -2.01
CDC42EP3Q9UKI2 SNORA25.7-201ENST00000364375 127 ntBASIC2.47□□□□□ -2.01
CDC42EP3Q9UKI2 RNU6-1164P-201ENST00000364428 107 ntBASIC2.47□□□□□ -2.01
CDC42EP3Q9UKI2 Y_RNA.253-201ENST00000364562 112 ntBASIC2.47□□□□□ -2.01
CDC42EP3Q9UKI2 SNORD116-14-201ENST00000383894 92 ntBASIC2.47□□□□□ -2.01
CDC42EP3Q9UKI2 SNORD116-17-201ENST00000383929 92 ntBASIC2.47□□□□□ -2.01
CDC42EP3Q9UKI2 RNU6-1080P-201ENST00000383982 107 ntBASIC2.47□□□□□ -2.01
CDC42EP3Q9UKI2 SNORD116-15-201ENST00000384445 92 ntBASIC2.47□□□□□ -2.01
CDC42EP3Q9UKI2 SNORD116-19-201ENST00000384729 92 ntBASIC2.47□□□□□ -2.01
CDC42EP3Q9UKI2 SNORA26-201ENST00000391286 122 ntBASIC2.47□□□□□ -2.01
CDC42EP3Q9UKI2 RNA5SP492-201ENST00000411330 114 ntBASIC2.47□□□□□ -2.01
CDC42EP3Q9UKI2 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.47□□□□□ -2.01
CDC42EP3Q9UKI2 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.47□□□□□ -2.01
CDC42EP3Q9UKI2 HMGN1P7-201ENST00000491722 313 ntBASIC2.47□□□□□ -2.01
CDC42EP3Q9UKI2 RNA5SP76-201ENST00000516277 87 ntBASIC2.47□□□□□ -2.01
CDC42EP3Q9UKI2 RNU1-142P-201ENST00000516682 145 ntBASIC2.47□□□□□ -2.01
CDC42EP3Q9UKI2 RNU7-149P-201ENST00000516739 59 ntBASIC2.47□□□□□ -2.01
CDC42EP3Q9UKI2 MIR3169-201ENST00000578032 83 ntBASIC2.47□□□□□ -2.01
CDC42EP3Q9UKI2 JPX_2.1-201ENST00000614161 69 ntBASIC2.47□□□□□ -2.01
CDC42EP3Q9UKI2 Pinc.1-201ENST00000616452 154 ntBASIC2.47□□□□□ -2.01
CDC42EP3Q9UKI2 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.47□□□□□ -2.01
CDC42EP3Q9UKI2 MIR7843-201ENST00000622274 79 ntBASIC2.47□□□□□ -2.01
CDC42EP3Q9UKI2 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.01
CDC42EP3Q9UKI2 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.01
CDC42EP3Q9UKI2 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.01
CDC42EP3Q9UKI2 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.46□□□□□ -2.02
CDC42EP3Q9UKI2 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
CDC42EP3Q9UKI2 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
CDC42EP3Q9UKI2 VTRNA1-1-201ENST00000363120 99 ntBASIC2.46□□□□□ -2.02
CDC42EP3Q9UKI2 SNORD50B-201ENST00000364995 70 ntBASIC2.46□□□□□ -2.02
CDC42EP3Q9UKI2 Y_RNA.486-201ENST00000384398 107 ntBASIC2.46□□□□□ -2.02
CDC42EP3Q9UKI2 RNU6-735P-201ENST00000410612 107 ntBASIC2.46□□□□□ -2.02
CDC42EP3Q9UKI2 RNU2-70P-201ENST00000410718 179 ntBASIC2.46□□□□□ -2.02
CDC42EP3Q9UKI2 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.46□□□□□ -2.02
CDC42EP3Q9UKI2 AC087499.2-201ENST00000432861 149 ntBASIC2.46□□□□□ -2.02
CDC42EP3Q9UKI2 AL109933.2-201ENST00000452651 260 ntBASIC2.46□□□□□ -2.02
CDC42EP3Q9UKI2 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.46□□□□□ -2.02
CDC42EP3Q9UKI2 AP001328.1-201ENST00000528550 176 ntBASIC2.46□□□□□ -2.02
CDC42EP3Q9UKI2 CYCSP26-201ENST00000534107 320 ntBASIC2.46□□□□□ -2.02
CDC42EP3Q9UKI2 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.46□□□□□ -2.02
CDC42EP3Q9UKI2 U7.2-201ENST00000607576 63 ntBASIC2.46□□□□□ -2.02
CDC42EP3Q9UKI2 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
CDC42EP3Q9UKI2 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CDC42EP3Q9UKI2 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CDC42EP3Q9UKI2 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CDC42EP3Q9UKI2 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CDC42EP3Q9UKI2 Y_RNA.66-201ENST00000362862 102 ntBASIC2.45□□□□□ -2.02
CDC42EP3Q9UKI2 Y_RNA.261-201ENST00000364631 102 ntBASIC2.45□□□□□ -2.02
CDC42EP3Q9UKI2 RNU6-80P-201ENST00000384195 107 ntBASIC2.45□□□□□ -2.02
CDC42EP3Q9UKI2 SNORD67-201ENST00000390833 111 ntBASIC2.45□□□□□ -2.02
CDC42EP3Q9UKI2 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.45□□□□□ -2.02
CDC42EP3Q9UKI2 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.45□□□□□ -2.02
CDC42EP3Q9UKI2 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.45□□□□□ -2.02
CDC42EP3Q9UKI2 RNU6-1211P-201ENST00000459179 105 ntBASIC2.45□□□□□ -2.02
CDC42EP3Q9UKI2 RNU6-1291P-201ENST00000516591 104 ntBASIC2.45□□□□□ -2.02
CDC42EP3Q9UKI2 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.45□□□□□ -2.02
CDC42EP3Q9UKI2 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CDC42EP3Q9UKI2 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
CDC42EP3Q9UKI2 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CDC42EP3Q9UKI2 AL161431.1-201ENST00000618966 4205 ntBASIC2.44□□□□□ -2.02
CDC42EP3Q9UKI2 AC096644.4-201ENST00000563417 2912 ntBASIC2.44□□□□□ -2.02
CDC42EP3Q9UKI2 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.44□□□□□ -2.02
CDC42EP3Q9UKI2 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CDC42EP3Q9UKI2 RNU6-1336P-201ENST00000383886 109 ntBASIC2.44□□□□□ -2.02
CDC42EP3Q9UKI2 SNORA70B-201ENST00000384210 135 ntBASIC2.44□□□□□ -2.02
CDC42EP3Q9UKI2 Y_RNA.584-201ENST00000391090 114 ntBASIC2.44□□□□□ -2.02
CDC42EP3Q9UKI2 Y_RNA.629-201ENST00000411368 105 ntBASIC2.44□□□□□ -2.02
CDC42EP3Q9UKI2 AC099677.2-201ENST00000436385 175 ntBASIC2.44□□□□□ -2.02
CDC42EP3Q9UKI2 UBBP3-201ENST00000445497 241 ntBASIC2.44□□□□□ -2.02
CDC42EP3Q9UKI2 RNU7-94P-201ENST00000459576 63 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms