Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
LRFN1Q9P244 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.97□□□□□ -2.09
LRFN1Q9P244 RNU6-379P-201ENST00000363813 104 ntBASIC1.97□□□□□ -2.09
LRFN1Q9P244 Y_RNA.416-201ENST00000384014 113 ntBASIC1.97□□□□□ -2.09
LRFN1Q9P244 RNU6-439P-201ENST00000384188 106 ntBASIC1.97□□□□□ -2.09
LRFN1Q9P244 Y_RNA.476-201ENST00000384347 108 ntBASIC1.97□□□□□ -2.09
LRFN1Q9P244 AL603910.2-201ENST00000407268 136 ntBASIC1.97□□□□□ -2.09
LRFN1Q9P244 HMGN2P38-201ENST00000423806 265 ntBASIC1.97□□□□□ -2.09
LRFN1Q9P244 HMGN2P23-201ENST00000456759 269 ntBASIC1.97□□□□□ -2.09
LRFN1Q9P244 AC091021.1-201ENST00000468051 388 ntBASIC1.97□□□□□ -2.09
LRFN1Q9P244 RNU6-341P-201ENST00000516973 96 ntBASIC1.97□□□□□ -2.09
LRFN1Q9P244 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.97□□□□□ -2.09
LRFN1Q9P244 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.97□□□□□ -2.09
LRFN1Q9P244 AC037487.3-201ENST00000606668 112 ntBASIC1.97□□□□□ -2.09
LRFN1Q9P244 MIR8054-201ENST00000620877 86 ntBASIC1.97□□□□□ -2.09
LRFN1Q9P244 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.97□□□□□ -2.09
LRFN1Q9P244 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.09
LRFN1Q9P244 ZNF720P1-201ENST00000562403 1939 ntBASIC1.96□□□□□ -2.1
LRFN1Q9P244 Y_RNA.60-201ENST00000362831 98 ntBASIC1.96□□□□□ -2.1
LRFN1Q9P244 RNU4-80P-201ENST00000363200 141 ntBASIC1.96□□□□□ -2.1
LRFN1Q9P244 Y_RNA.352-201ENST00000365439 102 ntBASIC1.96□□□□□ -2.1
LRFN1Q9P244 Y_RNA.489-201ENST00000384410 101 ntBASIC1.96□□□□□ -2.1
LRFN1Q9P244 MIR520G-201ENST00000385064 90 ntBASIC1.96□□□□□ -2.1
LRFN1Q9P244 AL023284.1-201ENST00000403956 276 ntBASIC1.96□□□□□ -2.1
LRFN1Q9P244 COX6CP10-201ENST00000416832 224 ntBASIC1.96□□□□□ -2.1
LRFN1Q9P244 RNU6-1023P-201ENST00000516137 106 ntBASIC1.96□□□□□ -2.1
LRFN1Q9P244 RNU6-191P-201ENST00000516295 94 ntBASIC1.96□□□□□ -2.1
LRFN1Q9P244 SNORA31.10-201ENST00000516482 106 ntBASIC1.96□□□□□ -2.1
LRFN1Q9P244 SNORA44.1-201ENST00000517031 108 ntBASIC1.96□□□□□ -2.1
LRFN1Q9P244 MIR4709-201ENST00000577272 72 ntBASIC1.96□□□□□ -2.1
LRFN1Q9P244 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.96□□□□□ -2.1
LRFN1Q9P244 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
LRFN1Q9P244 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.96□□□□□ -2.1
LRFN1Q9P244 SNORA25.1-201ENST00000362326 128 ntBASIC1.95□□□□□ -2.1
LRFN1Q9P244 Y_RNA.54-201ENST00000362766 105 ntBASIC1.95□□□□□ -2.1
LRFN1Q9P244 RNU6-414P-201ENST00000363705 104 ntBASIC1.95□□□□□ -2.1
LRFN1Q9P244 SNORD27-201ENST00000363981 72 ntBASIC1.95□□□□□ -2.1
LRFN1Q9P244 Y_RNA.277-201ENST00000364754 102 ntBASIC1.95□□□□□ -2.1
LRFN1Q9P244 SNORA20.1-201ENST00000364790 130 ntBASIC1.95□□□□□ -2.1
LRFN1Q9P244 RNA5SP37-201ENST00000365420 130 ntBASIC1.95□□□□□ -2.1
LRFN1Q9P244 Y_RNA.478-201ENST00000384358 107 ntBASIC1.95□□□□□ -2.1
LRFN1Q9P244 MIR548H3-201ENST00000408771 118 ntBASIC1.95□□□□□ -2.1
LRFN1Q9P244 AL162725.1-201ENST00000435405 301 ntBASIC1.95□□□□□ -2.1
LRFN1Q9P244 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
LRFN1Q9P244 HSPE1P21-201ENST00000438283 308 ntBASIC1.95□□□□□ -2.1
LRFN1Q9P244 JTBP1-201ENST00000441314 247 ntBASIC1.95□□□□□ -2.1
LRFN1Q9P244 AC091959.1-201ENST00000495857 238 ntBASIC1.95□□□□□ -2.1
LRFN1Q9P244 SNORA27.4-201ENST00000516650 95 ntBASIC1.95□□□□□ -2.1
LRFN1Q9P244 RNU6-63P-201ENST00000516690 95 ntBASIC1.95□□□□□ -2.1
LRFN1Q9P244 AC015720.1-201ENST00000565251 277 ntBASIC1.95□□□□□ -2.1
LRFN1Q9P244 MIR4643-201ENST00000577473 78 ntBASIC1.95□□□□□ -2.1
LRFN1Q9P244 MIR3198-2-201ENST00000577868 80 ntBASIC1.95□□□□□ -2.1
LRFN1Q9P244 AL512605.2-201ENST00000592972 256 ntBASIC1.95□□□□□ -2.1
LRFN1Q9P244 MIR8074-201ENST00000615081 81 ntBASIC1.95□□□□□ -2.1
LRFN1Q9P244 U2.14-201ENST00000615943 113 ntBASIC1.95□□□□□ -2.1
LRFN1Q9P244 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
LRFN1Q9P244 Y_RNA.20-201ENST00000362479 113 ntBASIC1.94□□□□□ -2.1
LRFN1Q9P244 Y_RNA.44-201ENST00000362676 108 ntBASIC1.94□□□□□ -2.1
LRFN1Q9P244 Y_RNA.140-201ENST00000363474 103 ntBASIC1.94□□□□□ -2.1
LRFN1Q9P244 RNU4-13P-201ENST00000364019 141 ntBASIC1.94□□□□□ -2.1
LRFN1Q9P244 RNU6-740P-201ENST00000364734 105 ntBASIC1.94□□□□□ -2.1
LRFN1Q9P244 RNU6-514P-201ENST00000384208 107 ntBASIC1.94□□□□□ -2.1
LRFN1Q9P244 RNU4-52P-201ENST00000384209 138 ntBASIC1.94□□□□□ -2.1
LRFN1Q9P244 SNORD116-13-201ENST00000384408 92 ntBASIC1.94□□□□□ -2.1
LRFN1Q9P244 Y_RNA.539-201ENST00000384635 107 ntBASIC1.94□□□□□ -2.1
LRFN1Q9P244 MIR30A-201ENST00000385092 71 ntBASIC1.94□□□□□ -2.1
LRFN1Q9P244 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
LRFN1Q9P244 RNU6-440P-201ENST00000390882 105 ntBASIC1.94□□□□□ -2.1
LRFN1Q9P244 RNU6-855P-201ENST00000410395 104 ntBASIC1.94□□□□□ -2.1
LRFN1Q9P244 RN7SKP200-201ENST00000410564 320 ntBASIC1.94□□□□□ -2.1
LRFN1Q9P244 RNU6-388P-201ENST00000517012 105 ntBASIC1.94□□□□□ -2.1
LRFN1Q9P244 RNU6-389P-201ENST00000517048 105 ntBASIC1.94□□□□□ -2.1
LRFN1Q9P244 AL358944.1-201ENST00000528537 144 ntBASIC1.94□□□□□ -2.1
LRFN1Q9P244 AL929325.1-201ENST00000603096 117 ntBASIC1.94□□□□□ -2.1
LRFN1Q9P244 AC004832.4-201ENST00000608952 331 ntBASIC1.94□□□□□ -2.1
LRFN1Q9P244 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
LRFN1Q9P244 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
LRFN1Q9P244 Y_RNA.238-201ENST00000364441 102 ntBASIC1.93□□□□□ -2.1
LRFN1Q9P244 Y_RNA.341-201ENST00000365341 102 ntBASIC1.93□□□□□ -2.1
LRFN1Q9P244 Y_RNA.368-201ENST00000365547 113 ntBASIC1.93□□□□□ -2.1
LRFN1Q9P244 RNA5SP511-201ENST00000410487 115 ntBASIC1.93□□□□□ -2.1
LRFN1Q9P244 AL161935.2-201ENST00000414627 60 ntBASIC1.93□□□□□ -2.1
LRFN1Q9P244 RNU6-111P-201ENST00000517179 105 ntBASIC1.93□□□□□ -2.1
LRFN1Q9P244 AC005357.1-201ENST00000588399 301 ntBASIC1.93□□□□□ -2.1
LRFN1Q9P244 AC002984.1-201ENST00000591692 448 ntBASIC1.93□□□□□ -2.1
LRFN1Q9P244 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
LRFN1Q9P244 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
LRFN1Q9P244 UBE2WP1-201ENST00000362030 340 ntBASIC1.92□□□□□ -2.1
LRFN1Q9P244 Y_RNA.310-201ENST00000365063 113 ntBASIC1.92□□□□□ -2.1
LRFN1Q9P244 Y_RNA.338-201ENST00000365320 114 ntBASIC1.92□□□□□ -2.1
LRFN1Q9P244 RNU6-338P-201ENST00000383888 105 ntBASIC1.92□□□□□ -2.1
LRFN1Q9P244 Y_RNA.456-201ENST00000384232 111 ntBASIC1.92□□□□□ -2.1
LRFN1Q9P244 RNU6-662P-201ENST00000384253 104 ntBASIC1.92□□□□□ -2.1
LRFN1Q9P244 RNU6-136P-201ENST00000384663 107 ntBASIC1.92□□□□□ -2.1
LRFN1Q9P244 RNU6-1031P-201ENST00000384773 107 ntBASIC1.92□□□□□ -2.1
LRFN1Q9P244 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.92□□□□□ -2.1
LRFN1Q9P244 MIR1267-201ENST00000408723 78 ntBASIC1.92□□□□□ -2.1
LRFN1Q9P244 RNA5SP247-201ENST00000411181 105 ntBASIC1.92□□□□□ -2.1
LRFN1Q9P244 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.92□□□□□ -2.1
LRFN1Q9P244 AL445646.1-201ENST00000431784 216 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms