Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 RNU6-211P-201ENST00000384047 107 ntBASIC2.09□□□□□ -2.07
NCKIPSDQ9NZQ3 SNORA26.5-201ENST00000391215 123 ntBASIC2.09□□□□□ -2.07
NCKIPSDQ9NZQ3 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.09□□□□□ -2.07
NCKIPSDQ9NZQ3 Y_RNA.637-201ENST00000459424 114 ntBASIC2.09□□□□□ -2.07
NCKIPSDQ9NZQ3 Y_RNA.703-201ENST00000516846 111 ntBASIC2.09□□□□□ -2.07
NCKIPSDQ9NZQ3 RNU6-856P-201ENST00000516959 98 ntBASIC2.09□□□□□ -2.07
NCKIPSDQ9NZQ3 RNU6-548P-201ENST00000517083 115 ntBASIC2.09□□□□□ -2.07
NCKIPSDQ9NZQ3 SUMO2P18-201ENST00000518873 252 ntBASIC2.09□□□□□ -2.07
NCKIPSDQ9NZQ3 MIR3169-201ENST00000578032 83 ntBASIC2.09□□□□□ -2.07
NCKIPSDQ9NZQ3 AL078604.3-201ENST00000615580 211 ntBASIC2.09□□□□□ -2.07
NCKIPSDQ9NZQ3 SNORA27.1-201ENST00000362604 124 ntBASIC2.08□□□□□ -2.08
NCKIPSDQ9NZQ3 RNU6-1048P-201ENST00000364054 107 ntBASIC2.08□□□□□ -2.08
NCKIPSDQ9NZQ3 RNA5SP160-201ENST00000364866 120 ntBASIC2.08□□□□□ -2.08
NCKIPSDQ9NZQ3 Y_RNA.308-201ENST00000365043 101 ntBASIC2.08□□□□□ -2.08
NCKIPSDQ9NZQ3 Y_RNA.310-201ENST00000365063 113 ntBASIC2.08□□□□□ -2.08
NCKIPSDQ9NZQ3 RNU6-763P-201ENST00000390865 106 ntBASIC2.08□□□□□ -2.08
NCKIPSDQ9NZQ3 MIR873-201ENST00000401120 77 ntBASIC2.08□□□□□ -2.08
NCKIPSDQ9NZQ3 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.08□□□□□ -2.08
NCKIPSDQ9NZQ3 MIR1283-2-201ENST00000408621 87 ntBASIC2.08□□□□□ -2.08
NCKIPSDQ9NZQ3 RNA5SP450-201ENST00000411206 102 ntBASIC2.08□□□□□ -2.08
NCKIPSDQ9NZQ3 AC060773.1-201ENST00000421698 310 ntBASIC2.08□□□□□ -2.08
NCKIPSDQ9NZQ3 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.08□□□□□ -2.08
NCKIPSDQ9NZQ3 AC027419.1-201ENST00000522976 328 ntBASIC2.08□□□□□ -2.08
NCKIPSDQ9NZQ3 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.08□□□□□ -2.08
NCKIPSDQ9NZQ3 AL365265.1-201ENST00000621045 234 ntBASIC2.08□□□□□ -2.08
NCKIPSDQ9NZQ3 AC009487.4-201ENST00000624969 3585 ntBASIC2.08□□□□□ -2.08
NCKIPSDQ9NZQ3 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.08□□□□□ -2.08
NCKIPSDQ9NZQ3 SNORD114-7-201ENST00000362520 77 ntBASIC2.07□□□□□ -2.08
NCKIPSDQ9NZQ3 RNU6-653P-201ENST00000363074 106 ntBASIC2.07□□□□□ -2.08
NCKIPSDQ9NZQ3 RNU6-923P-201ENST00000364753 107 ntBASIC2.07□□□□□ -2.08
NCKIPSDQ9NZQ3 Y_RNA.368-201ENST00000365547 113 ntBASIC2.07□□□□□ -2.08
NCKIPSDQ9NZQ3 SNORD116-13-201ENST00000384408 92 ntBASIC2.07□□□□□ -2.08
NCKIPSDQ9NZQ3 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
NCKIPSDQ9NZQ3 SNORA26.9-201ENST00000391322 122 ntBASIC2.07□□□□□ -2.08
NCKIPSDQ9NZQ3 BTF3P11-201ENST00000426582 477 ntBASIC2.07□□□□□ -2.08
NCKIPSDQ9NZQ3 AL445646.1-201ENST00000431784 216 ntBASIC2.07□□□□□ -2.08
NCKIPSDQ9NZQ3 ATP5J2P3-201ENST00000451550 258 ntBASIC2.07□□□□□ -2.08
NCKIPSDQ9NZQ3 U8.19-201ENST00000459095 133 ntBASIC2.07□□□□□ -2.08
NCKIPSDQ9NZQ3 MIR514B-201ENST00000516774 80 ntBASIC2.07□□□□□ -2.08
NCKIPSDQ9NZQ3 RNU6-255P-201ENST00000516957 105 ntBASIC2.07□□□□□ -2.08
NCKIPSDQ9NZQ3 AC022559.1-201ENST00000520905 205 ntBASIC2.07□□□□□ -2.08
NCKIPSDQ9NZQ3 AC136628.3-201ENST00000521868 290 ntBASIC2.07□□□□□ -2.08
NCKIPSDQ9NZQ3 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.07□□□□□ -2.08
NCKIPSDQ9NZQ3 uc_338.20-201ENST00000621563 178 ntBASIC2.07□□□□□ -2.08
NCKIPSDQ9NZQ3 AL355497.1-201ENST00000406262 551 ntBASIC2.06□□□□□ -2.08
NCKIPSDQ9NZQ3 MIR1253-201ENST00000408273 105 ntBASIC2.06□□□□□ -2.08
NCKIPSDQ9NZQ3 RNU6-855P-201ENST00000410395 104 ntBASIC2.06□□□□□ -2.08
NCKIPSDQ9NZQ3 RPS26P55-201ENST00000471178 356 ntBASIC2.06□□□□□ -2.08
NCKIPSDQ9NZQ3 AC010598.1-201ENST00000510378 103 ntBASIC2.06□□□□□ -2.08
NCKIPSDQ9NZQ3 SNORA70.12-201ENST00000516084 153 ntBASIC2.06□□□□□ -2.08
NCKIPSDQ9NZQ3 RNU6-1278P-201ENST00000516130 107 ntBASIC2.06□□□□□ -2.08
NCKIPSDQ9NZQ3 RNU6-1041P-201ENST00000516254 102 ntBASIC2.06□□□□□ -2.08
NCKIPSDQ9NZQ3 MRPS18CP4-201ENST00000535821 231 ntBASIC2.06□□□□□ -2.08
NCKIPSDQ9NZQ3 MIR4308-201ENST00000580634 81 ntBASIC2.06□□□□□ -2.08
NCKIPSDQ9NZQ3 U2.15-201ENST00000611544 191 ntBASIC2.06□□□□□ -2.08
NCKIPSDQ9NZQ3 U2.16-201ENST00000613119 191 ntBASIC2.06□□□□□ -2.08
NCKIPSDQ9NZQ3 U2.12-201ENST00000613778 191 ntBASIC2.06□□□□□ -2.08
NCKIPSDQ9NZQ3 U2.20-201ENST00000613956 192 ntBASIC2.06□□□□□ -2.08
NCKIPSDQ9NZQ3 U2.9-201ENST00000615427 191 ntBASIC2.06□□□□□ -2.08
NCKIPSDQ9NZQ3 U2.11-201ENST00000616345 191 ntBASIC2.06□□□□□ -2.08
NCKIPSDQ9NZQ3 U2.2-201ENST00000616535 191 ntBASIC2.06□□□□□ -2.08
NCKIPSDQ9NZQ3 U2.3-201ENST00000617785 191 ntBASIC2.06□□□□□ -2.08
NCKIPSDQ9NZQ3 U2.19-201ENST00000618602 191 ntBASIC2.06□□□□□ -2.08
NCKIPSDQ9NZQ3 RNU2-1-201ENST00000618664 191 ntBASIC2.06□□□□□ -2.08
NCKIPSDQ9NZQ3 U2.6-201ENST00000619225 191 ntBASIC2.06□□□□□ -2.08
NCKIPSDQ9NZQ3 U2.5-201ENST00000619465 191 ntBASIC2.06□□□□□ -2.08
NCKIPSDQ9NZQ3 U2.10-201ENST00000620268 191 ntBASIC2.06□□□□□ -2.08
NCKIPSDQ9NZQ3 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
NCKIPSDQ9NZQ3 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
NCKIPSDQ9NZQ3 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.05□□□□□ -2.08
NCKIPSDQ9NZQ3 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
NCKIPSDQ9NZQ3 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
NCKIPSDQ9NZQ3 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
NCKIPSDQ9NZQ3 RNA5SP276-201ENST00000362580 94 ntBASIC2.05□□□□□ -2.08
NCKIPSDQ9NZQ3 RNY1P5-201ENST00000383890 115 ntBASIC2.05□□□□□ -2.08
NCKIPSDQ9NZQ3 SNORA72.4-201ENST00000384174 132 ntBASIC2.05□□□□□ -2.08
NCKIPSDQ9NZQ3 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
NCKIPSDQ9NZQ3 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.05□□□□□ -2.08
NCKIPSDQ9NZQ3 AC008134.1-201ENST00000420943 193 ntBASIC2.05□□□□□ -2.08
NCKIPSDQ9NZQ3 AC074198.2-201ENST00000508153 258 ntBASIC2.05□□□□□ -2.08
NCKIPSDQ9NZQ3 RNY3P16-201ENST00000516338 101 ntBASIC2.05□□□□□ -2.08
NCKIPSDQ9NZQ3 RNU6-1337P-201ENST00000516525 95 ntBASIC2.05□□□□□ -2.08
NCKIPSDQ9NZQ3 RNU6-295P-201ENST00000516901 104 ntBASIC2.05□□□□□ -2.08
NCKIPSDQ9NZQ3 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.05□□□□□ -2.08
NCKIPSDQ9NZQ3 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.05□□□□□ -2.08
NCKIPSDQ9NZQ3 MIR4287-201ENST00000579398 78 ntBASIC2.05□□□□□ -2.08
NCKIPSDQ9NZQ3 MIR3133-201ENST00000583157 78 ntBASIC2.05□□□□□ -2.08
NCKIPSDQ9NZQ3 AC005786.1-201ENST00000588553 154 ntBASIC2.05□□□□□ -2.08
NCKIPSDQ9NZQ3 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC2.05□□□□□ -2.08
NCKIPSDQ9NZQ3 AL353997.5-201ENST00000618886 171 ntBASIC2.05□□□□□ -2.08
NCKIPSDQ9NZQ3 U2.22-201ENST00000636441 106 ntBASIC2.05□□□□□ -2.08
NCKIPSDQ9NZQ3 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
NCKIPSDQ9NZQ3 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.05□□□□□ -2.08
NCKIPSDQ9NZQ3 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
NCKIPSDQ9NZQ3 AL356292.1-201ENST00000283110 373 ntBASIC2.04□□□□□ -2.08
NCKIPSDQ9NZQ3 RNU6-774P-201ENST00000363238 107 ntBASIC2.04□□□□□ -2.08
NCKIPSDQ9NZQ3 Y_RNA.121-201ENST00000363309 113 ntBASIC2.04□□□□□ -2.08
NCKIPSDQ9NZQ3 SNORA16B-201ENST00000364674 135 ntBASIC2.04□□□□□ -2.08
NCKIPSDQ9NZQ3 Y_RNA.287-201ENST00000364853 94 ntBASIC2.04□□□□□ -2.08
NCKIPSDQ9NZQ3 RNU6-1240P-201ENST00000365155 104 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 160.7 ms