Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 AC005176.2-201ENST00000596933 147 ntBASIC0.75□□□□□ -2.29
HMG20AQ9NP66 AL020996.3-201ENST00000606617 222 ntBASIC0.75□□□□□ -2.29
HMG20AQ9NP66 U6.92-201ENST00000636464 89 ntBASIC0.75□□□□□ -2.29
HMG20AQ9NP66 AC099654.14-201ENST00000638599 341 ntBASIC0.75□□□□□ -2.29
HMG20AQ9NP66 Y_RNA.142-201ENST00000363491 102 ntBASIC0.74□□□□□ -2.29
HMG20AQ9NP66 RNU1-124P-201ENST00000363861 145 ntBASIC0.74□□□□□ -2.29
HMG20AQ9NP66 RNU6-163P-201ENST00000384396 106 ntBASIC0.74□□□□□ -2.29
HMG20AQ9NP66 RNY3P4-201ENST00000384428 101 ntBASIC0.74□□□□□ -2.29
HMG20AQ9NP66 AC093019.1-201ENST00000443135 252 ntBASIC0.74□□□□□ -2.29
HMG20AQ9NP66 FCF1P4-201ENST00000448326 183 ntBASIC0.74□□□□□ -2.29
HMG20AQ9NP66 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.74□□□□□ -2.29
HMG20AQ9NP66 RNU6-322P-201ENST00000516010 103 ntBASIC0.74□□□□□ -2.29
HMG20AQ9NP66 SNORD79.1-201ENST00000516069 84 ntBASIC0.74□□□□□ -2.29
HMG20AQ9NP66 RNU6-155P-201ENST00000516347 100 ntBASIC0.74□□□□□ -2.29
HMG20AQ9NP66 RNU7-4P-201ENST00000516961 62 ntBASIC0.74□□□□□ -2.29
HMG20AQ9NP66 AC144568.1-201ENST00000520139 137 ntBASIC0.74□□□□□ -2.29
HMG20AQ9NP66 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.74□□□□□ -2.29
HMG20AQ9NP66 MIR3192-201ENST00000584920 77 ntBASIC0.74□□□□□ -2.29
HMG20AQ9NP66 AC120024.3-201ENST00000603167 156 ntBASIC0.74□□□□□ -2.29
HMG20AQ9NP66 AC004832.4-201ENST00000608952 331 ntBASIC0.74□□□□□ -2.29
HMG20AQ9NP66 U2.1-201ENST00000618978 145 ntBASIC0.74□□□□□ -2.29
HMG20AQ9NP66 RNU6-324P-201ENST00000363957 106 ntBASIC0.73□□□□□ -2.29
HMG20AQ9NP66 Y_RNA.259-201ENST00000364619 101 ntBASIC0.73□□□□□ -2.29
HMG20AQ9NP66 Y_RNA.303-201ENST00000364998 94 ntBASIC0.73□□□□□ -2.29
HMG20AQ9NP66 RNU6-1297P-201ENST00000384415 104 ntBASIC0.73□□□□□ -2.29
HMG20AQ9NP66 MIR100-201ENST00000385259 80 ntBASIC0.73□□□□□ -2.29
HMG20AQ9NP66 SNORD78.2-201ENST00000391076 69 ntBASIC0.73□□□□□ -2.29
HMG20AQ9NP66 RNY4P36-201ENST00000391116 96 ntBASIC0.73□□□□□ -2.29
HMG20AQ9NP66 RNU11-5P-201ENST00000391216 129 ntBASIC0.73□□□□□ -2.29
HMG20AQ9NP66 MIR891A-201ENST00000401237 79 ntBASIC0.73□□□□□ -2.29
HMG20AQ9NP66 RNU2-61P-201ENST00000411069 191 ntBASIC0.73□□□□□ -2.29
HMG20AQ9NP66 SUMO1P2-201ENST00000452524 304 ntBASIC0.73□□□□□ -2.29
HMG20AQ9NP66 SNORA31.4-201ENST00000516049 129 ntBASIC0.73□□□□□ -2.29
HMG20AQ9NP66 Y_RNA.718-201ENST00000517110 102 ntBASIC0.73□□□□□ -2.29
HMG20AQ9NP66 AL358944.1-201ENST00000528537 144 ntBASIC0.73□□□□□ -2.29
HMG20AQ9NP66 AC011604.1-201ENST00000545978 196 ntBASIC0.73□□□□□ -2.29
HMG20AQ9NP66 MIR4498-201ENST00000577599 66 ntBASIC0.73□□□□□ -2.29
HMG20AQ9NP66 AC005730.3-201ENST00000583067 366 ntBASIC0.73□□□□□ -2.29
HMG20AQ9NP66 AC106800.4-201ENST00000614905 153 ntBASIC0.73□□□□□ -2.29
HMG20AQ9NP66 AC104985.2-201ENST00000620598 500 ntBASIC0.73□□□□□ -2.29
HMG20AQ9NP66 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
HMG20AQ9NP66 SNORD114-7-201ENST00000362520 77 ntBASIC0.72□□□□□ -2.29
HMG20AQ9NP66 RNY1P10-201ENST00000363268 113 ntBASIC0.72□□□□□ -2.29
HMG20AQ9NP66 RNU6-833P-201ENST00000363486 107 ntBASIC0.72□□□□□ -2.29
HMG20AQ9NP66 RNU6-969P-201ENST00000383900 105 ntBASIC0.72□□□□□ -2.29
HMG20AQ9NP66 MIR516B2-201ENST00000385190 85 ntBASIC0.72□□□□□ -2.29
HMG20AQ9NP66 SNORA75.2-201ENST00000391138 150 ntBASIC0.72□□□□□ -2.29
HMG20AQ9NP66 SNORA75.3-201ENST00000391231 150 ntBASIC0.72□□□□□ -2.29
HMG20AQ9NP66 MIR1298-201ENST00000408783 112 ntBASIC0.72□□□□□ -2.29
HMG20AQ9NP66 MLLT10P1-201ENST00000418346 262 ntBASIC0.72□□□□□ -2.29
HMG20AQ9NP66 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.72□□□□□ -2.29
HMG20AQ9NP66 PRDX4P1-201ENST00000507189 574 ntBASIC0.72□□□□□ -2.29
HMG20AQ9NP66 RNU6-1053P-201ENST00000515930 101 ntBASIC0.72□□□□□ -2.29
HMG20AQ9NP66 AC006380.1-201ENST00000603598 186 ntBASIC0.72□□□□□ -2.29
HMG20AQ9NP66 FAM71BP1-201ENST00000604431 523 ntBASIC0.72□□□□□ -2.29
HMG20AQ9NP66 AL132765.2-201ENST00000610812 351 ntBASIC0.72□□□□□ -2.29
HMG20AQ9NP66 MIR6857-201ENST00000613267 93 ntBASIC0.72□□□□□ -2.29
HMG20AQ9NP66 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.72□□□□□ -2.29
HMG20AQ9NP66 MIR1302-1-201ENST00000637932 143 ntBASIC0.72□□□□□ -2.29
HMG20AQ9NP66 AC008163.1-202ENST00000636004 2889 ntBASIC0.72□□□□□ -2.29
HMG20AQ9NP66 RNU6-490P-201ENST00000362985 107 ntBASIC0.71□□□□□ -2.3
HMG20AQ9NP66 Y_RNA.146-201ENST00000363549 102 ntBASIC0.71□□□□□ -2.3
HMG20AQ9NP66 Y_RNA.329-201ENST00000365209 107 ntBASIC0.71□□□□□ -2.3
HMG20AQ9NP66 Y_RNA.336-201ENST00000365307 109 ntBASIC0.71□□□□□ -2.3
HMG20AQ9NP66 Y_RNA.387-201ENST00000383918 102 ntBASIC0.71□□□□□ -2.3
HMG20AQ9NP66 Y_RNA.496-201ENST00000384444 101 ntBASIC0.71□□□□□ -2.3
HMG20AQ9NP66 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.71□□□□□ -2.3
HMG20AQ9NP66 AC006461.1-201ENST00000412637 326 ntBASIC0.71□□□□□ -2.3
HMG20AQ9NP66 AL390729.2-201ENST00000416137 156 ntBASIC0.71□□□□□ -2.3
HMG20AQ9NP66 POLR2J4-204ENST00000418424 324 ntBASIC0.71□□□□□ -2.3
HMG20AQ9NP66 AC063976.4-201ENST00000421971 163 ntBASIC0.71□□□□□ -2.3
HMG20AQ9NP66 HMGN1P7-201ENST00000491722 313 ntBASIC0.71□□□□□ -2.3
HMG20AQ9NP66 AC082651.2-201ENST00000496833 166 ntBASIC0.71□□□□□ -2.3
HMG20AQ9NP66 AC005840.1-201ENST00000498412 377 ntBASIC0.71□□□□□ -2.3
HMG20AQ9NP66 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.71□□□□□ -2.3
HMG20AQ9NP66 CYCTP-201ENST00000504253 315 ntBASIC0.71□□□□□ -2.3
HMG20AQ9NP66 TRMT112P2-201ENST00000512910 132 ntBASIC0.71□□□□□ -2.3
HMG20AQ9NP66 SNORD111.1-201ENST00000516421 86 ntBASIC0.71□□□□□ -2.3
HMG20AQ9NP66 AC006600.1-201ENST00000572529 153 ntBASIC0.71□□□□□ -2.3
HMG20AQ9NP66 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.71□□□□□ -2.3
HMG20AQ9NP66 RNA5SP432-201ENST00000362480 116 ntBASIC0.7□□□□□ -2.3
HMG20AQ9NP66 Y_RNA.253-201ENST00000364562 112 ntBASIC0.7□□□□□ -2.3
HMG20AQ9NP66 RNU6-1040P-201ENST00000383974 107 ntBASIC0.7□□□□□ -2.3
HMG20AQ9NP66 Y_RNA.463-201ENST00000384271 102 ntBASIC0.7□□□□□ -2.3
HMG20AQ9NP66 MIR19B1-201ENST00000384829 87 ntBASIC0.7□□□□□ -2.3
HMG20AQ9NP66 MIR628-201ENST00000385229 95 ntBASIC0.7□□□□□ -2.3
HMG20AQ9NP66 AL606490.4-201ENST00000423117 127 ntBASIC0.7□□□□□ -2.3
HMG20AQ9NP66 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.7□□□□□ -2.3
HMG20AQ9NP66 RPL39P39-201ENST00000455840 151 ntBASIC0.7□□□□□ -2.3
HMG20AQ9NP66 LINC01399-202ENST00000458450 244 ntBASIC0.7□□□□□ -2.3
HMG20AQ9NP66 Y_RNA.632-201ENST00000459189 102 ntBASIC0.7□□□□□ -2.3
HMG20AQ9NP66 AC091951.2-201ENST00000500762 203 ntBASIC0.7□□□□□ -2.3
HMG20AQ9NP66 SNORA70.12-201ENST00000516084 153 ntBASIC0.7□□□□□ -2.3
HMG20AQ9NP66 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.7□□□□□ -2.3
HMG20AQ9NP66 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.7□□□□□ -2.3
HMG20AQ9NP66 AL355375.2-201ENST00000574825 175 ntBASIC0.7□□□□□ -2.3
HMG20AQ9NP66 UBE2V2P2-201ENST00000587677 504 ntBASIC0.7□□□□□ -2.3
HMG20AQ9NP66 PRELID3BP2-201ENST00000605362 201 ntBASIC0.7□□□□□ -2.3
HMG20AQ9NP66 AC022441.3-201ENST00000605737 136 ntBASIC0.7□□□□□ -2.3
HMG20AQ9NP66 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms