Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 Y_RNA.802-201ENST00000614892 130 ntBASIC2.24□□□□□ -2.05
EBF3Q9H4W6 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
EBF3Q9H4W6 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.24□□□□□ -2.05
EBF3Q9H4W6 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
EBF3Q9H4W6 ZNF702P-202ENST00000434269 1966 ntBASIC2.23□□□□□ -2.05
EBF3Q9H4W6 Y_RNA.71-201ENST00000362892 104 ntBASIC2.23□□□□□ -2.05
EBF3Q9H4W6 RNU6-944P-201ENST00000364023 107 ntBASIC2.23□□□□□ -2.05
EBF3Q9H4W6 Y_RNA.229-201ENST00000364347 113 ntBASIC2.23□□□□□ -2.05
EBF3Q9H4W6 RNU6-1305P-201ENST00000364353 104 ntBASIC2.23□□□□□ -2.05
EBF3Q9H4W6 RNA5SP205-201ENST00000364653 136 ntBASIC2.23□□□□□ -2.05
EBF3Q9H4W6 U8.7-201ENST00000364940 136 ntBASIC2.23□□□□□ -2.05
EBF3Q9H4W6 Y_RNA.542-201ENST00000384641 111 ntBASIC2.23□□□□□ -2.05
EBF3Q9H4W6 RNU6-1072P-201ENST00000384703 107 ntBASIC2.23□□□□□ -2.05
EBF3Q9H4W6 RNU6-443P-201ENST00000384780 107 ntBASIC2.23□□□□□ -2.05
EBF3Q9H4W6 SNORA40-201ENST00000388090 126 ntBASIC2.23□□□□□ -2.05
EBF3Q9H4W6 MIR526A2-201ENST00000390198 65 ntBASIC2.23□□□□□ -2.05
EBF3Q9H4W6 RNA5SP338-201ENST00000410495 85 ntBASIC2.23□□□□□ -2.05
EBF3Q9H4W6 RNU6-383P-201ENST00000410864 94 ntBASIC2.23□□□□□ -2.05
EBF3Q9H4W6 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
EBF3Q9H4W6 AL137159.1-201ENST00000452808 512 ntBASIC2.23□□□□□ -2.05
EBF3Q9H4W6 CYP2C59P-201ENST00000457790 269 ntBASIC2.23□□□□□ -2.05
EBF3Q9H4W6 AC114982.1-201ENST00000469402 321 ntBASIC2.23□□□□□ -2.05
EBF3Q9H4W6 HMGN2P9-201ENST00000476875 229 ntBASIC2.23□□□□□ -2.05
EBF3Q9H4W6 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.23□□□□□ -2.05
EBF3Q9H4W6 MIR449C-201ENST00000516047 92 ntBASIC2.23□□□□□ -2.05
EBF3Q9H4W6 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.23□□□□□ -2.05
EBF3Q9H4W6 RNA5SP200-201ENST00000516360 103 ntBASIC2.23□□□□□ -2.05
EBF3Q9H4W6 SCARNA16.3-201ENST00000516595 184 ntBASIC2.23□□□□□ -2.05
EBF3Q9H4W6 RNU6-1098P-201ENST00000516772 96 ntBASIC2.23□□□□□ -2.05
EBF3Q9H4W6 RNU6-1234P-201ENST00000516877 103 ntBASIC2.23□□□□□ -2.05
EBF3Q9H4W6 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC2.23□□□□□ -2.05
EBF3Q9H4W6 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.23□□□□□ -2.05
EBF3Q9H4W6 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.23□□□□□ -2.05
EBF3Q9H4W6 AC009831.4-201ENST00000620744 325 ntBASIC2.23□□□□□ -2.05
EBF3Q9H4W6 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.23□□□□□ -2.05
EBF3Q9H4W6 AL356292.1-201ENST00000283110 373 ntBASIC2.22□□□□□ -2.05
EBF3Q9H4W6 RNA5SP99-201ENST00000364020 114 ntBASIC2.22□□□□□ -2.05
EBF3Q9H4W6 SNORD116-13-201ENST00000384408 92 ntBASIC2.22□□□□□ -2.05
EBF3Q9H4W6 MIR586-201ENST00000385035 97 ntBASIC2.22□□□□□ -2.05
EBF3Q9H4W6 MIR1185-2-201ENST00000408687 86 ntBASIC2.22□□□□□ -2.05
EBF3Q9H4W6 RNU6-710P-201ENST00000410424 105 ntBASIC2.22□□□□□ -2.05
EBF3Q9H4W6 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.22□□□□□ -2.05
EBF3Q9H4W6 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.22□□□□□ -2.05
EBF3Q9H4W6 AL161788.1-201ENST00000441805 169 ntBASIC2.22□□□□□ -2.05
EBF3Q9H4W6 AC090515.1-201ENST00000465295 476 ntBASIC2.22□□□□□ -2.05
EBF3Q9H4W6 AC107027.2-201ENST00000512197 115 ntBASIC2.22□□□□□ -2.05
EBF3Q9H4W6 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.22□□□□□ -2.05
EBF3Q9H4W6 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.22□□□□□ -2.05
EBF3Q9H4W6 MIR203B-201ENST00000636080 86 ntBASIC2.22□□□□□ -2.05
EBF3Q9H4W6 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
EBF3Q9H4W6 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
EBF3Q9H4W6 Y_RNA.127-201ENST00000363386 109 ntBASIC2.21□□□□□ -2.06
EBF3Q9H4W6 RNU6-1205P-201ENST00000363625 106 ntBASIC2.21□□□□□ -2.06
EBF3Q9H4W6 RNU6-215P-201ENST00000365169 102 ntBASIC2.21□□□□□ -2.06
EBF3Q9H4W6 RNU6-234P-201ENST00000365229 104 ntBASIC2.21□□□□□ -2.06
EBF3Q9H4W6 RNU6-407P-201ENST00000365280 104 ntBASIC2.21□□□□□ -2.06
EBF3Q9H4W6 Y_RNA.420-201ENST00000384043 110 ntBASIC2.21□□□□□ -2.06
EBF3Q9H4W6 RNU1-52P-201ENST00000384190 164 ntBASIC2.21□□□□□ -2.06
EBF3Q9H4W6 MIR524-201ENST00000385242 87 ntBASIC2.21□□□□□ -2.06
EBF3Q9H4W6 RNU6-220P-201ENST00000390919 107 ntBASIC2.21□□□□□ -2.06
EBF3Q9H4W6 MIR300-201ENST00000401138 83 ntBASIC2.21□□□□□ -2.06
EBF3Q9H4W6 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.21□□□□□ -2.06
EBF3Q9H4W6 MIR1278-201ENST00000408753 81 ntBASIC2.21□□□□□ -2.06
EBF3Q9H4W6 Y_RNA.629-201ENST00000411368 105 ntBASIC2.21□□□□□ -2.06
EBF3Q9H4W6 AC006461.1-201ENST00000412637 326 ntBASIC2.21□□□□□ -2.06
EBF3Q9H4W6 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.21□□□□□ -2.06
EBF3Q9H4W6 AC008267.6-201ENST00000441664 139 ntBASIC2.21□□□□□ -2.06
EBF3Q9H4W6 AC117454.1-201ENST00000491120 168 ntBASIC2.21□□□□□ -2.06
EBF3Q9H4W6 AC090255.1-201ENST00000495779 349 ntBASIC2.21□□□□□ -2.06
EBF3Q9H4W6 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.21□□□□□ -2.06
EBF3Q9H4W6 RNU5F-4P-201ENST00000516581 114 ntBASIC2.21□□□□□ -2.06
EBF3Q9H4W6 SNORA48.11-201ENST00000517015 89 ntBASIC2.21□□□□□ -2.06
EBF3Q9H4W6 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
EBF3Q9H4W6 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
EBF3Q9H4W6 SNORA20B-201ENST00000384220 132 ntBASIC2.2□□□□□ -2.06
EBF3Q9H4W6 MIR15B-201ENST00000385045 98 ntBASIC2.2□□□□□ -2.06
EBF3Q9H4W6 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
EBF3Q9H4W6 RNU6-460P-201ENST00000391158 108 ntBASIC2.2□□□□□ -2.06
EBF3Q9H4W6 AL606845.1-201ENST00000404881 255 ntBASIC2.2□□□□□ -2.06
EBF3Q9H4W6 RPL30P13-201ENST00000418873 348 ntBASIC2.2□□□□□ -2.06
EBF3Q9H4W6 CYCSP49-201ENST00000420810 319 ntBASIC2.2□□□□□ -2.06
EBF3Q9H4W6 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.2□□□□□ -2.06
EBF3Q9H4W6 RNU6-717P-201ENST00000459076 104 ntBASIC2.2□□□□□ -2.06
EBF3Q9H4W6 AC092991.1-201ENST00000477176 376 ntBASIC2.2□□□□□ -2.06
EBF3Q9H4W6 RNU6-1333P-201ENST00000516162 93 ntBASIC2.2□□□□□ -2.06
EBF3Q9H4W6 AL391903.3-201ENST00000612158 163 ntBASIC2.2□□□□□ -2.06
EBF3Q9H4W6 AC245884.12-201ENST00000615364 59 ntBASIC2.2□□□□□ -2.06
EBF3Q9H4W6 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
EBF3Q9H4W6 Y_RNA.353-201ENST00000365440 108 ntBASIC2.19□□□□□ -2.06
EBF3Q9H4W6 SNORD116-14-201ENST00000383894 92 ntBASIC2.19□□□□□ -2.06
EBF3Q9H4W6 SNORD116-17-201ENST00000383929 92 ntBASIC2.19□□□□□ -2.06
EBF3Q9H4W6 RNU6-643P-201ENST00000384018 107 ntBASIC2.19□□□□□ -2.06
EBF3Q9H4W6 SNORD116-15-201ENST00000384445 92 ntBASIC2.19□□□□□ -2.06
EBF3Q9H4W6 RNU6-768P-201ENST00000384683 107 ntBASIC2.19□□□□□ -2.06
EBF3Q9H4W6 SNORD116-19-201ENST00000384729 92 ntBASIC2.19□□□□□ -2.06
EBF3Q9H4W6 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
EBF3Q9H4W6 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.19□□□□□ -2.06
EBF3Q9H4W6 RPL23AP7-203ENST00000449021 469 ntBASIC2.19□□□□□ -2.06
EBF3Q9H4W6 AL121914.1-201ENST00000450188 156 ntBASIC2.19□□□□□ -2.06
EBF3Q9H4W6 RNU6-1211P-201ENST00000459179 105 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 142.2 ms