Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 Y_RNA.310-201ENST00000365063 113 ntBASIC2.07□□□□□ -2.08
CDT1Q9H211 SNORA20B-201ENST00000384220 132 ntBASIC2.07□□□□□ -2.08
CDT1Q9H211 MIR17-201ENST00000385012 84 ntBASIC2.07□□□□□ -2.08
CDT1Q9H211 MIR29C-201ENST00000385231 88 ntBASIC2.07□□□□□ -2.08
CDT1Q9H211 HMGN2P39-201ENST00000398005 273 ntBASIC2.07□□□□□ -2.08
CDT1Q9H211 RNA5SP338-201ENST00000410495 85 ntBASIC2.07□□□□□ -2.08
CDT1Q9H211 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.07□□□□□ -2.08
CDT1Q9H211 RNU1-131P-201ENST00000458943 161 ntBASIC2.07□□□□□ -2.08
CDT1Q9H211 AC090255.1-201ENST00000495779 349 ntBASIC2.07□□□□□ -2.08
CDT1Q9H211 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CDT1Q9H211 AC108729.3-201ENST00000513484 108 ntBASIC2.07□□□□□ -2.08
CDT1Q9H211 Y_RNA.700-201ENST00000516806 100 ntBASIC2.07□□□□□ -2.08
CDT1Q9H211 RNU2-19P-201ENST00000517288 84 ntBASIC2.07□□□□□ -2.08
CDT1Q9H211 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.07□□□□□ -2.08
CDT1Q9H211 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.07□□□□□ -2.08
CDT1Q9H211 AL159152.1-201ENST00000635019 2587 ntBASIC2.07□□□□□ -2.08
CDT1Q9H211 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.07□□□□□ -2.08
CDT1Q9H211 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
CDT1Q9H211 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
CDT1Q9H211 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CDT1Q9H211 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CDT1Q9H211 RNU6-23P-201ENST00000363283 107 ntBASIC2.06□□□□□ -2.08
CDT1Q9H211 RNU6-1062P-201ENST00000383908 107 ntBASIC2.06□□□□□ -2.08
CDT1Q9H211 Y_RNA.555-201ENST00000384673 110 ntBASIC2.06□□□□□ -2.08
CDT1Q9H211 MIR583-201ENST00000384846 75 ntBASIC2.06□□□□□ -2.08
CDT1Q9H211 MIR518A2-201ENST00000384966 87 ntBASIC2.06□□□□□ -2.08
CDT1Q9H211 AL445685.2-201ENST00000422551 342 ntBASIC2.06□□□□□ -2.08
CDT1Q9H211 RNU7-120P-201ENST00000459334 63 ntBASIC2.06□□□□□ -2.08
CDT1Q9H211 COX6CP14-201ENST00000469580 174 ntBASIC2.06□□□□□ -2.08
CDT1Q9H211 RNA5SP182-201ENST00000516064 82 ntBASIC2.06□□□□□ -2.08
CDT1Q9H211 RNU6-1041P-201ENST00000516254 102 ntBASIC2.06□□□□□ -2.08
CDT1Q9H211 RNU6-295P-201ENST00000516901 104 ntBASIC2.06□□□□□ -2.08
CDT1Q9H211 RNU6-255P-201ENST00000516957 105 ntBASIC2.06□□□□□ -2.08
CDT1Q9H211 AC136628.3-201ENST00000521868 290 ntBASIC2.06□□□□□ -2.08
CDT1Q9H211 AP005660.1-201ENST00000522972 293 ntBASIC2.06□□□□□ -2.08
CDT1Q9H211 AP002392.1-201ENST00000537692 208 ntBASIC2.06□□□□□ -2.08
CDT1Q9H211 MIR3169-201ENST00000578032 83 ntBASIC2.06□□□□□ -2.08
CDT1Q9H211 AC073349.3-201ENST00000617616 186 ntBASIC2.06□□□□□ -2.08
CDT1Q9H211 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.06□□□□□ -2.08
CDT1Q9H211 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CDT1Q9H211 RNU1-58P-201ENST00000362413 163 ntBASIC2.05□□□□□ -2.08
CDT1Q9H211 Y_RNA.180-201ENST00000363867 113 ntBASIC2.05□□□□□ -2.08
CDT1Q9H211 Y_RNA.226-201ENST00000364337 114 ntBASIC2.05□□□□□ -2.08
CDT1Q9H211 Y_RNA.304-201ENST00000365011 112 ntBASIC2.05□□□□□ -2.08
CDT1Q9H211 RNU6-1240P-201ENST00000365155 104 ntBASIC2.05□□□□□ -2.08
CDT1Q9H211 SNORD116-13-201ENST00000384408 92 ntBASIC2.05□□□□□ -2.08
CDT1Q9H211 HMGN2P23-201ENST00000456759 269 ntBASIC2.05□□□□□ -2.08
CDT1Q9H211 AC011406.1-201ENST00000512440 370 ntBASIC2.05□□□□□ -2.08
CDT1Q9H211 RNU6-63P-201ENST00000516690 95 ntBASIC2.05□□□□□ -2.08
CDT1Q9H211 SUMO2P18-201ENST00000518873 252 ntBASIC2.05□□□□□ -2.08
CDT1Q9H211 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.05□□□□□ -2.08
CDT1Q9H211 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.05□□□□□ -2.08
CDT1Q9H211 RNU6-774P-201ENST00000363238 107 ntBASIC2.04□□□□□ -2.08
CDT1Q9H211 MIR597-201ENST00000384968 97 ntBASIC2.04□□□□□ -2.08
CDT1Q9H211 RNU11-3P-201ENST00000391111 133 ntBASIC2.04□□□□□ -2.08
CDT1Q9H211 SNORA40.18-201ENST00000391200 128 ntBASIC2.04□□□□□ -2.08
CDT1Q9H211 MTCO2P33-201ENST00000402100 465 ntBASIC2.04□□□□□ -2.08
CDT1Q9H211 MIR1283-2-201ENST00000408621 87 ntBASIC2.04□□□□□ -2.08
CDT1Q9H211 AC008134.1-201ENST00000420943 193 ntBASIC2.04□□□□□ -2.08
CDT1Q9H211 RNU6-1219P-201ENST00000516143 112 ntBASIC2.04□□□□□ -2.08
CDT1Q9H211 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CDT1Q9H211 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.04□□□□□ -2.08
CDT1Q9H211 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.03□□□□□ -2.08
CDT1Q9H211 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CDT1Q9H211 Y_RNA.270-201ENST00000364693 104 ntBASIC2.03□□□□□ -2.08
CDT1Q9H211 U8.7-201ENST00000364940 136 ntBASIC2.03□□□□□ -2.08
CDT1Q9H211 Y_RNA.368-201ENST00000365547 113 ntBASIC2.03□□□□□ -2.08
CDT1Q9H211 MIR9-3-201ENST00000385084 90 ntBASIC2.03□□□□□ -2.08
CDT1Q9H211 RNU6-855P-201ENST00000410395 104 ntBASIC2.03□□□□□ -2.08
CDT1Q9H211 RPS29P11-201ENST00000496507 171 ntBASIC2.03□□□□□ -2.08
CDT1Q9H211 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.03□□□□□ -2.08
CDT1Q9H211 MIR4287-201ENST00000579398 78 ntBASIC2.03□□□□□ -2.08
CDT1Q9H211 AP000553.5-201ENST00000641933 54 ntBASIC2.03□□□□□ -2.08
CDT1Q9H211 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.03□□□□□ -2.08
CDT1Q9H211 WWP1P1-201ENST00000466609 2769 ntBASIC2.02□□□□□ -2.09
CDT1Q9H211 SNORA27.1-201ENST00000362604 124 ntBASIC2.02□□□□□ -2.09
CDT1Q9H211 RNU6-1020P-201ENST00000363684 107 ntBASIC2.02□□□□□ -2.09
CDT1Q9H211 snoU2_19.4-201ENST00000364329 80 ntBASIC2.02□□□□□ -2.09
CDT1Q9H211 RNA5SP138-201ENST00000365098 114 ntBASIC2.02□□□□□ -2.09
CDT1Q9H211 Y_RNA.341-201ENST00000365341 102 ntBASIC2.02□□□□□ -2.09
CDT1Q9H211 SNORA72.4-201ENST00000384174 132 ntBASIC2.02□□□□□ -2.09
CDT1Q9H211 SNORA40.19-201ENST00000390846 128 ntBASIC2.02□□□□□ -2.09
CDT1Q9H211 SNORA26.9-201ENST00000391322 122 ntBASIC2.02□□□□□ -2.09
CDT1Q9H211 MIR1253-201ENST00000408273 105 ntBASIC2.02□□□□□ -2.09
CDT1Q9H211 CYCSP49-201ENST00000420810 319 ntBASIC2.02□□□□□ -2.09
CDT1Q9H211 HMGN2P34-201ENST00000437647 269 ntBASIC2.02□□□□□ -2.09
CDT1Q9H211 AL353689.1-201ENST00000438895 199 ntBASIC2.02□□□□□ -2.09
CDT1Q9H211 ATP5J2P3-201ENST00000451550 258 ntBASIC2.02□□□□□ -2.09
CDT1Q9H211 RNU7-141P-201ENST00000459304 62 ntBASIC2.02□□□□□ -2.09
CDT1Q9H211 RPL23AP63-201ENST00000498752 471 ntBASIC2.02□□□□□ -2.09
CDT1Q9H211 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.02□□□□□ -2.09
CDT1Q9H211 SCARNA8-201ENST00000515924 131 ntBASIC2.02□□□□□ -2.09
CDT1Q9H211 RNU6-1337P-201ENST00000516525 95 ntBASIC2.02□□□□□ -2.09
CDT1Q9H211 MIR5692C2-201ENST00000577959 77 ntBASIC2.02□□□□□ -2.09
CDT1Q9H211 Z83818.1-201ENST00000603584 150 ntBASIC2.02□□□□□ -2.09
CDT1Q9H211 AC022513.1-201ENST00000624512 117 ntBASIC2.02□□□□□ -2.09
CDT1Q9H211 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CDT1Q9H211 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CDT1Q9H211 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.01□□□□□ -2.09
CDT1Q9H211 Y_RNA.233-201ENST00000364407 101 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms