Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 RNU6-1333P-201ENST00000516162 93 ntBASIC2.54□□□□□ -2
SALL3Q9BXA9 RNU5F-4P-201ENST00000516581 114 ntBASIC2.54□□□□□ -2
SALL3Q9BXA9 SNORA31.15-201ENST00000516771 132 ntBASIC2.54□□□□□ -2
SALL3Q9BXA9 RNU6-971P-201ENST00000516920 106 ntBASIC2.54□□□□□ -2
SALL3Q9BXA9 MIR5582-201ENST00000579697 68 ntBASIC2.54□□□□□ -2
SALL3Q9BXA9 MIR6132-201ENST00000622083 109 ntBASIC2.54□□□□□ -2
SALL3Q9BXA9 MIR7157-201ENST00000635801 60 ntBASIC2.54□□□□□ -2
SALL3Q9BXA9 AC092881.1-201ENST00000638218 2733 ntBASIC2.54□□□□□ -2
SALL3Q9BXA9 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.54□□□□□ -2
SALL3Q9BXA9 MIRLET7G-201ENST00000362280 84 ntBASIC2.53□□□□□ -2
SALL3Q9BXA9 Y_RNA.71-201ENST00000362892 104 ntBASIC2.53□□□□□ -2
SALL3Q9BXA9 Y_RNA.127-201ENST00000363386 109 ntBASIC2.53□□□□□ -2
SALL3Q9BXA9 Y_RNA.215-201ENST00000364204 112 ntBASIC2.53□□□□□ -2
SALL3Q9BXA9 snoU2_19.4-201ENST00000364329 80 ntBASIC2.53□□□□□ -2
SALL3Q9BXA9 Y_RNA.293-201ENST00000364908 93 ntBASIC2.53□□□□□ -2
SALL3Q9BXA9 SNORA67.3-201ENST00000384366 140 ntBASIC2.53□□□□□ -2
SALL3Q9BXA9 MIR616-201ENST00000385293 97 ntBASIC2.53□□□□□ -2
SALL3Q9BXA9 RNU6-220P-201ENST00000390919 107 ntBASIC2.53□□□□□ -2
SALL3Q9BXA9 MIR1283-1-201ENST00000408494 87 ntBASIC2.53□□□□□ -2
SALL3Q9BXA9 RNA5SP89-201ENST00000410300 108 ntBASIC2.53□□□□□ -2
SALL3Q9BXA9 AL021397.1-201ENST00000451806 248 ntBASIC2.53□□□□□ -2
SALL3Q9BXA9 RNU6-717P-201ENST00000459076 104 ntBASIC2.53□□□□□ -2
SALL3Q9BXA9 RPL36AP21-201ENST00000490372 323 ntBASIC2.53□□□□□ -2
SALL3Q9BXA9 SCARNA3-201ENST00000517097 143 ntBASIC2.53□□□□□ -2
SALL3Q9BXA9 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.53□□□□□ -2
SALL3Q9BXA9 AC018630.3-201ENST00000542637 96 ntBASIC2.53□□□□□ -2
SALL3Q9BXA9 AC069294.1-201ENST00000608397 350 ntBASIC2.53□□□□□ -2
SALL3Q9BXA9 Y_RNA.778-201ENST00000620203 90 ntBASIC2.53□□□□□ -2
SALL3Q9BXA9 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.53□□□□□ -2
SALL3Q9BXA9 Z82209.1-201ENST00000422141 2135 ntBASIC2.52□□□□□ -2.01
SALL3Q9BXA9 RNU6-147P-201ENST00000383983 107 ntBASIC2.52□□□□□ -2.01
SALL3Q9BXA9 MIR873-201ENST00000401120 77 ntBASIC2.52□□□□□ -2.01
SALL3Q9BXA9 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.52□□□□□ -2.01
SALL3Q9BXA9 RNU7-141P-201ENST00000459304 62 ntBASIC2.52□□□□□ -2.01
SALL3Q9BXA9 RNU7-57P-201ENST00000459540 60 ntBASIC2.52□□□□□ -2.01
SALL3Q9BXA9 AC010409.1-201ENST00000487382 476 ntBASIC2.52□□□□□ -2.01
SALL3Q9BXA9 RNU6-65P-201ENST00000516332 98 ntBASIC2.52□□□□□ -2.01
SALL3Q9BXA9 MIR4446-201ENST00000578505 67 ntBASIC2.52□□□□□ -2.01
SALL3Q9BXA9 AL391903.3-201ENST00000612158 163 ntBASIC2.52□□□□□ -2.01
SALL3Q9BXA9 AC091895.1-201ENST00000624494 256 ntBASIC2.52□□□□□ -2.01
SALL3Q9BXA9 AC068700.1-201ENST00000565862 3754 ntBASIC2.52□□□□□ -2.01
SALL3Q9BXA9 RNA5SP393-201ENST00000363423 117 ntBASIC2.51□□□□□ -2.01
SALL3Q9BXA9 RNU6-1205P-201ENST00000363625 106 ntBASIC2.51□□□□□ -2.01
SALL3Q9BXA9 RNU6-271P-201ENST00000363858 105 ntBASIC2.51□□□□□ -2.01
SALL3Q9BXA9 Y_RNA.338-201ENST00000365320 114 ntBASIC2.51□□□□□ -2.01
SALL3Q9BXA9 RNU6-975P-201ENST00000384296 105 ntBASIC2.51□□□□□ -2.01
SALL3Q9BXA9 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.51□□□□□ -2.01
SALL3Q9BXA9 RNU7-14P-201ENST00000459331 62 ntBASIC2.51□□□□□ -2.01
SALL3Q9BXA9 RNU6-221P-201ENST00000459541 99 ntBASIC2.51□□□□□ -2.01
SALL3Q9BXA9 AC010598.1-201ENST00000510378 103 ntBASIC2.51□□□□□ -2.01
SALL3Q9BXA9 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.51□□□□□ -2.01
SALL3Q9BXA9 SNORD116-25-201ENST00000516517 92 ntBASIC2.51□□□□□ -2.01
SALL3Q9BXA9 MIR4753-201ENST00000585119 83 ntBASIC2.51□□□□□ -2.01
SALL3Q9BXA9 AC006254.2-201ENST00000603259 279 ntBASIC2.51□□□□□ -2.01
SALL3Q9BXA9 AL049779.4-201ENST00000604500 156 ntBASIC2.51□□□□□ -2.01
SALL3Q9BXA9 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.51□□□□□ -2.01
SALL3Q9BXA9 snoZ196.1-201ENST00000625269 89 ntBASIC2.51□□□□□ -2.01
SALL3Q9BXA9 ZNF355P-201ENST00000427301 3216 ntBASIC2.51□□□□□ -2.01
SALL3Q9BXA9 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.51□□□□□ -2.01
SALL3Q9BXA9 Y_RNA.24-201ENST00000362508 103 ntBASIC2.5□□□□□ -2.01
SALL3Q9BXA9 RNU6-1048P-201ENST00000364054 107 ntBASIC2.5□□□□□ -2.01
SALL3Q9BXA9 SNORD31B-201ENST00000364977 69 ntBASIC2.5□□□□□ -2.01
SALL3Q9BXA9 RNU6-1228P-201ENST00000391014 107 ntBASIC2.5□□□□□ -2.01
SALL3Q9BXA9 RNU6-1275P-201ENST00000391087 107 ntBASIC2.5□□□□□ -2.01
SALL3Q9BXA9 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.5□□□□□ -2.01
SALL3Q9BXA9 AL355796.1-201ENST00000406706 323 ntBASIC2.5□□□□□ -2.01
SALL3Q9BXA9 U6atac.2-201ENST00000408644 118 ntBASIC2.5□□□□□ -2.01
SALL3Q9BXA9 SNORA11.4-201ENST00000408823 129 ntBASIC2.5□□□□□ -2.01
SALL3Q9BXA9 MTND4LP9-201ENST00000427694 174 ntBASIC2.5□□□□□ -2.01
SALL3Q9BXA9 AC008267.6-201ENST00000441664 139 ntBASIC2.5□□□□□ -2.01
SALL3Q9BXA9 AC025033.1-201ENST00000463883 194 ntBASIC2.5□□□□□ -2.01
SALL3Q9BXA9 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.5□□□□□ -2.01
SALL3Q9BXA9 AC107027.2-201ENST00000512197 115 ntBASIC2.5□□□□□ -2.01
SALL3Q9BXA9 RNU6-948P-201ENST00000516374 107 ntBASIC2.5□□□□□ -2.01
SALL3Q9BXA9 Y_RNA.686-201ENST00000516548 134 ntBASIC2.5□□□□□ -2.01
SALL3Q9BXA9 AC022616.8-201ENST00000533569 253 ntBASIC2.5□□□□□ -2.01
SALL3Q9BXA9 AC109810.1-201ENST00000534066 224 ntBASIC2.5□□□□□ -2.01
SALL3Q9BXA9 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.5□□□□□ -2.01
SALL3Q9BXA9 MIR5089-201ENST00000580047 84 ntBASIC2.5□□□□□ -2.01
SALL3Q9BXA9 AC006435.5-201ENST00000624486 112 ntBASIC2.5□□□□□ -2.01
SALL3Q9BXA9 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.5□□□□□ -2.01
SALL3Q9BXA9 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
SALL3Q9BXA9 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
SALL3Q9BXA9 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
SALL3Q9BXA9 Y_RNA.164-201ENST00000363709 102 ntBASIC2.49□□□□□ -2.01
SALL3Q9BXA9 SNORD73B-201ENST00000364394 72 ntBASIC2.49□□□□□ -2.01
SALL3Q9BXA9 RNU1-91P-201ENST00000364746 163 ntBASIC2.49□□□□□ -2.01
SALL3Q9BXA9 RNU6-234P-201ENST00000365229 104 ntBASIC2.49□□□□□ -2.01
SALL3Q9BXA9 RNU6-1323P-201ENST00000384025 107 ntBASIC2.49□□□□□ -2.01
SALL3Q9BXA9 RNY3P5-201ENST00000384127 102 ntBASIC2.49□□□□□ -2.01
SALL3Q9BXA9 SNORA20B-201ENST00000384220 132 ntBASIC2.49□□□□□ -2.01
SALL3Q9BXA9 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.49□□□□□ -2.01
SALL3Q9BXA9 AL445646.1-201ENST00000431784 216 ntBASIC2.49□□□□□ -2.01
SALL3Q9BXA9 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.49□□□□□ -2.01
SALL3Q9BXA9 SCARNA8-201ENST00000515924 131 ntBASIC2.49□□□□□ -2.01
SALL3Q9BXA9 RNU7-115P-201ENST00000516433 55 ntBASIC2.49□□□□□ -2.01
SALL3Q9BXA9 CYCSP26-201ENST00000534107 320 ntBASIC2.49□□□□□ -2.01
SALL3Q9BXA9 MIR4724-201ENST00000579485 89 ntBASIC2.49□□□□□ -2.01
SALL3Q9BXA9 MIR548X2-201ENST00000579776 100 ntBASIC2.49□□□□□ -2.01
SALL3Q9BXA9 SNORA27.1-201ENST00000362604 124 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms