Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 SNORA53-201ENST00000391141 249 ntBASIC1.36□□□□□ -2.19
CCDC28BQ9BUN5 RNU6-855P-201ENST00000410395 104 ntBASIC1.36□□□□□ -2.19
CCDC28BQ9BUN5 RN7SKP200-201ENST00000410564 320 ntBASIC1.36□□□□□ -2.19
CCDC28BQ9BUN5 COX6CP10-201ENST00000416832 224 ntBASIC1.36□□□□□ -2.19
CCDC28BQ9BUN5 DYNLT3P2-201ENST00000442517 295 ntBASIC1.36□□□□□ -2.19
CCDC28BQ9BUN5 AL606517.2-201ENST00000442855 241 ntBASIC1.36□□□□□ -2.19
CCDC28BQ9BUN5 AC091021.1-201ENST00000468051 388 ntBASIC1.36□□□□□ -2.19
CCDC28BQ9BUN5 RNU6-1045P-201ENST00000516321 107 ntBASIC1.36□□□□□ -2.19
CCDC28BQ9BUN5 RNU6-635P-201ENST00000516651 102 ntBASIC1.36□□□□□ -2.19
CCDC28BQ9BUN5 SNORA31.24-201ENST00000517232 57 ntBASIC1.36□□□□□ -2.19
CCDC28BQ9BUN5 AC015720.1-201ENST00000565251 277 ntBASIC1.36□□□□□ -2.19
CCDC28BQ9BUN5 AC037487.3-201ENST00000606668 112 ntBASIC1.36□□□□□ -2.19
CCDC28BQ9BUN5 MIR8054-201ENST00000620877 86 ntBASIC1.36□□□□□ -2.19
CCDC28BQ9BUN5 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.36□□□□□ -2.19
CCDC28BQ9BUN5 MIR424-201ENST00000362227 98 ntBASIC1.35□□□□□ -2.19
CCDC28BQ9BUN5 Y_RNA.26-201ENST00000362539 101 ntBASIC1.35□□□□□ -2.19
CCDC28BQ9BUN5 Y_RNA.176-201ENST00000363815 109 ntBASIC1.35□□□□□ -2.19
CCDC28BQ9BUN5 Y_RNA.310-201ENST00000365063 113 ntBASIC1.35□□□□□ -2.19
CCDC28BQ9BUN5 Y_RNA.341-201ENST00000365341 102 ntBASIC1.35□□□□□ -2.19
CCDC28BQ9BUN5 Y_RNA.459-201ENST00000384251 102 ntBASIC1.35□□□□□ -2.19
CCDC28BQ9BUN5 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.35□□□□□ -2.19
CCDC28BQ9BUN5 RNA5SP511-201ENST00000410487 115 ntBASIC1.35□□□□□ -2.19
CCDC28BQ9BUN5 RPL21P38-201ENST00000418090 167 ntBASIC1.35□□□□□ -2.19
CCDC28BQ9BUN5 MTND2P23-201ENST00000422990 651 ntBASIC1.35□□□□□ -2.19
CCDC28BQ9BUN5 AL358176.2-201ENST00000425769 204 ntBASIC1.35□□□□□ -2.19
CCDC28BQ9BUN5 SNRPGP13-201ENST00000442212 177 ntBASIC1.35□□□□□ -2.19
CCDC28BQ9BUN5 RPS20P10-201ENST00000451209 253 ntBASIC1.35□□□□□ -2.19
CCDC28BQ9BUN5 U8.19-201ENST00000459095 133 ntBASIC1.35□□□□□ -2.19
CCDC28BQ9BUN5 AC098869.1-201ENST00000481627 292 ntBASIC1.35□□□□□ -2.19
CCDC28BQ9BUN5 RN7SKP179-201ENST00000516126 217 ntBASIC1.35□□□□□ -2.19
CCDC28BQ9BUN5 RNU6-63P-201ENST00000516690 95 ntBASIC1.35□□□□□ -2.19
CCDC28BQ9BUN5 RNU7-28P-201ENST00000516759 62 ntBASIC1.35□□□□□ -2.19
CCDC28BQ9BUN5 RNU2-31P-201ENST00000516954 155 ntBASIC1.35□□□□□ -2.19
CCDC28BQ9BUN5 AP002004.2-201ENST00000531656 154 ntBASIC1.35□□□□□ -2.19
CCDC28BQ9BUN5 MIR4709-201ENST00000577272 72 ntBASIC1.35□□□□□ -2.19
CCDC28BQ9BUN5 SNORD53B-201ENST00000577887 78 ntBASIC1.35□□□□□ -2.19
CCDC28BQ9BUN5 AC005972.2-201ENST00000604690 348 ntBASIC1.35□□□□□ -2.19
CCDC28BQ9BUN5 AC004832.4-201ENST00000608952 331 ntBASIC1.35□□□□□ -2.19
CCDC28BQ9BUN5 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.35□□□□□ -2.19
CCDC28BQ9BUN5 U6.104-201ENST00000637979 90 ntBASIC1.35□□□□□ -2.19
CCDC28BQ9BUN5 Y_RNA.84-201ENST00000363011 104 ntBASIC1.34□□□□□ -2.19
CCDC28BQ9BUN5 RNU6-414P-201ENST00000363705 104 ntBASIC1.34□□□□□ -2.19
CCDC28BQ9BUN5 RNU4-13P-201ENST00000364019 141 ntBASIC1.34□□□□□ -2.19
CCDC28BQ9BUN5 RNU6-1323P-201ENST00000384025 107 ntBASIC1.34□□□□□ -2.19
CCDC28BQ9BUN5 Y_RNA.418-201ENST00000384029 102 ntBASIC1.34□□□□□ -2.19
CCDC28BQ9BUN5 SNORD116-13-201ENST00000384408 92 ntBASIC1.34□□□□□ -2.19
CCDC28BQ9BUN5 Y_RNA.541-201ENST00000384640 113 ntBASIC1.34□□□□□ -2.19
CCDC28BQ9BUN5 Y_RNA.574-201ENST00000384766 95 ntBASIC1.34□□□□□ -2.19
CCDC28BQ9BUN5 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
CCDC28BQ9BUN5 RNU6-440P-201ENST00000390882 105 ntBASIC1.34□□□□□ -2.19
CCDC28BQ9BUN5 SNORA67.6-201ENST00000391093 99 ntBASIC1.34□□□□□ -2.19
CCDC28BQ9BUN5 RPL30P13-201ENST00000418873 348 ntBASIC1.34□□□□□ -2.19
CCDC28BQ9BUN5 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.34□□□□□ -2.19
CCDC28BQ9BUN5 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.34□□□□□ -2.19
CCDC28BQ9BUN5 MTATP8P1-201ENST00000467115 207 ntBASIC1.34□□□□□ -2.19
CCDC28BQ9BUN5 RN7SL429P-201ENST00000479090 223 ntBASIC1.34□□□□□ -2.19
CCDC28BQ9BUN5 RN7SL489P-201ENST00000486185 223 ntBASIC1.34□□□□□ -2.19
CCDC28BQ9BUN5 RN7SL327P-201ENST00000488659 223 ntBASIC1.34□□□□□ -2.19
CCDC28BQ9BUN5 RNU7-116P-201ENST00000516940 62 ntBASIC1.34□□□□□ -2.19
CCDC28BQ9BUN5 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.34□□□□□ -2.19
CCDC28BQ9BUN5 SNORA28-201ENST00000606769 126 ntBASIC1.34□□□□□ -2.19
CCDC28BQ9BUN5 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.34□□□□□ -2.19
CCDC28BQ9BUN5 RN7SL853P-201ENST00000617250 223 ntBASIC1.34□□□□□ -2.19
CCDC28BQ9BUN5 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.34□□□□□ -2.19
CCDC28BQ9BUN5 AC100821.1-201ENST00000523153 2479 ntBASIC1.33□□□□□ -2.2
CCDC28BQ9BUN5 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
CCDC28BQ9BUN5 RNU4-80P-201ENST00000363200 141 ntBASIC1.33□□□□□ -2.2
CCDC28BQ9BUN5 SNORA4.2-201ENST00000365313 147 ntBASIC1.33□□□□□ -2.2
CCDC28BQ9BUN5 SNORD26-201ENST00000384147 75 ntBASIC1.33□□□□□ -2.2
CCDC28BQ9BUN5 MIR215-201ENST00000384858 110 ntBASIC1.33□□□□□ -2.2
CCDC28BQ9BUN5 AL034345.1-201ENST00000407768 123 ntBASIC1.33□□□□□ -2.2
CCDC28BQ9BUN5 RNU6-1203P-201ENST00000410703 110 ntBASIC1.33□□□□□ -2.2
CCDC28BQ9BUN5 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.33□□□□□ -2.2
CCDC28BQ9BUN5 JTBP1-201ENST00000441314 247 ntBASIC1.33□□□□□ -2.2
CCDC28BQ9BUN5 RNU6-191P-201ENST00000516295 94 ntBASIC1.33□□□□□ -2.2
CCDC28BQ9BUN5 SNORA31.10-201ENST00000516482 106 ntBASIC1.33□□□□□ -2.2
CCDC28BQ9BUN5 RNU6-1096P-201ENST00000517089 102 ntBASIC1.33□□□□□ -2.2
CCDC28BQ9BUN5 AC136628.3-201ENST00000521868 290 ntBASIC1.33□□□□□ -2.2
CCDC28BQ9BUN5 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.33□□□□□ -2.2
CCDC28BQ9BUN5 AC068338.1-201ENST00000565567 176 ntBASIC1.33□□□□□ -2.2
CCDC28BQ9BUN5 MIR3145-201ENST00000580727 82 ntBASIC1.33□□□□□ -2.2
CCDC28BQ9BUN5 MIR8074-201ENST00000615081 81 ntBASIC1.33□□□□□ -2.2
CCDC28BQ9BUN5 AL078604.3-201ENST00000615580 211 ntBASIC1.33□□□□□ -2.2
CCDC28BQ9BUN5 MIR8062-201ENST00000621515 85 ntBASIC1.33□□□□□ -2.2
CCDC28BQ9BUN5 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
CCDC28BQ9BUN5 Y_RNA.149-201ENST00000363558 117 ntBASIC1.32□□□□□ -2.2
CCDC28BQ9BUN5 Y_RNA.172-201ENST00000363765 102 ntBASIC1.32□□□□□ -2.2
CCDC28BQ9BUN5 Y_RNA.267-201ENST00000364679 109 ntBASIC1.32□□□□□ -2.2
CCDC28BQ9BUN5 RNU6-60P-201ENST00000364792 103 ntBASIC1.32□□□□□ -2.2
CCDC28BQ9BUN5 RNU6-1031P-201ENST00000384773 107 ntBASIC1.32□□□□□ -2.2
CCDC28BQ9BUN5 RNU6-1105P-201ENST00000384774 107 ntBASIC1.32□□□□□ -2.2
CCDC28BQ9BUN5 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
CCDC28BQ9BUN5 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.32□□□□□ -2.2
CCDC28BQ9BUN5 MTCO1P5-201ENST00000433573 344 ntBASIC1.32□□□□□ -2.2
CCDC28BQ9BUN5 RPS4XP11-201ENST00000446897 772 ntBASIC1.32□□□□□ -2.2
CCDC28BQ9BUN5 TRBVB-201ENST00000477100 408 ntBASIC1.32□□□□□ -2.2
CCDC28BQ9BUN5 RNU2-56P-201ENST00000516826 190 ntBASIC1.32□□□□□ -2.2
CCDC28BQ9BUN5 RNU6-295P-201ENST00000516901 104 ntBASIC1.32□□□□□ -2.2
CCDC28BQ9BUN5 MIR4298-201ENST00000584380 73 ntBASIC1.32□□□□□ -2.2
CCDC28BQ9BUN5 AL929325.1-201ENST00000603096 117 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 194.3 ms