Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC1.55□□□□□ -2.16
LITAFQ99732 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC1.55□□□□□ -2.16
LITAFQ99732 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
LITAFQ99732 Y_RNA.111-201ENST00000363248 100 ntBASIC1.54□□□□□ -2.16
LITAFQ99732 RNA5SP138-201ENST00000365098 114 ntBASIC1.54□□□□□ -2.16
LITAFQ99732 Y_RNA.506-201ENST00000384494 102 ntBASIC1.54□□□□□ -2.16
LITAFQ99732 RNU6-125P-201ENST00000384505 107 ntBASIC1.54□□□□□ -2.16
LITAFQ99732 MIR27B-201ENST00000385129 97 ntBASIC1.54□□□□□ -2.16
LITAFQ99732 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
LITAFQ99732 SNORA48.1-201ENST00000390879 135 ntBASIC1.54□□□□□ -2.16
LITAFQ99732 RNU6-239P-201ENST00000390990 99 ntBASIC1.54□□□□□ -2.16
LITAFQ99732 Y_RNA.580-201ENST00000391004 95 ntBASIC1.54□□□□□ -2.16
LITAFQ99732 RNA5SP109-201ENST00000391010 116 ntBASIC1.54□□□□□ -2.16
LITAFQ99732 RNU4-43P-201ENST00000410628 137 ntBASIC1.54□□□□□ -2.16
LITAFQ99732 Y_RNA.622-201ENST00000411091 108 ntBASIC1.54□□□□□ -2.16
LITAFQ99732 HMGN2P38-201ENST00000423806 265 ntBASIC1.54□□□□□ -2.16
LITAFQ99732 AC245047.3-201ENST00000429428 127 ntBASIC1.54□□□□□ -2.16
LITAFQ99732 AL135938.1-201ENST00000443141 297 ntBASIC1.54□□□□□ -2.16
LITAFQ99732 AC023449.1-201ENST00000454464 154 ntBASIC1.54□□□□□ -2.16
LITAFQ99732 AL049830.1-201ENST00000468034 425 ntBASIC1.54□□□□□ -2.16
LITAFQ99732 RN7SL807P-201ENST00000470923 297 ntBASIC1.54□□□□□ -2.16
LITAFQ99732 RNU7-193P-201ENST00000516723 65 ntBASIC1.54□□□□□ -2.16
LITAFQ99732 MIR3133-201ENST00000583157 78 ntBASIC1.54□□□□□ -2.16
LITAFQ99732 uc_338.4-201ENST00000616635 176 ntBASIC1.54□□□□□ -2.16
LITAFQ99732 MIR1291-201ENST00000627649 87 ntBASIC1.54□□□□□ -2.16
LITAFQ99732 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
LITAFQ99732 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
LITAFQ99732 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
LITAFQ99732 AP006437.1-201ENST00000641440 3685 ntBASIC1.54□□□□□ -2.16
LITAFQ99732 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.54□□□□□ -2.16
LITAFQ99732 SNORD45.3-201ENST00000363836 72 ntBASIC1.53□□□□□ -2.16
LITAFQ99732 RNU6-1130P-201ENST00000365434 107 ntBASIC1.53□□□□□ -2.16
LITAFQ99732 RNU6-643P-201ENST00000384018 107 ntBASIC1.53□□□□□ -2.16
LITAFQ99732 RNU4-52P-201ENST00000384209 138 ntBASIC1.53□□□□□ -2.16
LITAFQ99732 RNA5SP501-201ENST00000410990 112 ntBASIC1.53□□□□□ -2.16
LITAFQ99732 RNU2-55P-201ENST00000411146 174 ntBASIC1.53□□□□□ -2.16
LITAFQ99732 SNRPGP10-201ENST00000432323 225 ntBASIC1.53□□□□□ -2.16
LITAFQ99732 NDUFA4P2-201ENST00000489989 244 ntBASIC1.53□□□□□ -2.16
LITAFQ99732 AC107027.2-201ENST00000512197 115 ntBASIC1.53□□□□□ -2.16
LITAFQ99732 AC096725.1-201ENST00000514266 313 ntBASIC1.53□□□□□ -2.16
LITAFQ99732 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC1.53□□□□□ -2.16
LITAFQ99732 RNU7-200P-201ENST00000516105 62 ntBASIC1.53□□□□□ -2.16
LITAFQ99732 SNORD77.4-201ENST00000516158 81 ntBASIC1.53□□□□□ -2.16
LITAFQ99732 RNU7-121P-201ENST00000516604 62 ntBASIC1.53□□□□□ -2.16
LITAFQ99732 RNU2-56P-201ENST00000516826 190 ntBASIC1.53□□□□□ -2.16
LITAFQ99732 MIR5002-201ENST00000584713 97 ntBASIC1.53□□□□□ -2.16
LITAFQ99732 AC006023.1-201ENST00000603944 259 ntBASIC1.53□□□□□ -2.16
LITAFQ99732 MIR6798-201ENST00000612887 67 ntBASIC1.53□□□□□ -2.16
LITAFQ99732 AL591926.4-201ENST00000616895 298 ntBASIC1.53□□□□□ -2.16
LITAFQ99732 MIR6766-201ENST00000622641 72 ntBASIC1.53□□□□□ -2.16
LITAFQ99732 CTSLP2-204ENST00000629029 392 ntBASIC1.53□□□□□ -2.16
LITAFQ99732 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.17
LITAFQ99732 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC1.52□□□□□ -2.17
LITAFQ99732 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
LITAFQ99732 SNORA67.1-201ENST00000364749 141 ntBASIC1.52□□□□□ -2.17
LITAFQ99732 RNY1P5-201ENST00000383890 115 ntBASIC1.52□□□□□ -2.17
LITAFQ99732 RNU6-449P-201ENST00000383914 107 ntBASIC1.52□□□□□ -2.17
LITAFQ99732 SNORD116-18-201ENST00000383961 92 ntBASIC1.52□□□□□ -2.17
LITAFQ99732 RNU6-484P-201ENST00000384016 107 ntBASIC1.52□□□□□ -2.17
LITAFQ99732 SNORA12.1-201ENST00000390873 148 ntBASIC1.52□□□□□ -2.17
LITAFQ99732 AL359511.1-201ENST00000402970 211 ntBASIC1.52□□□□□ -2.17
LITAFQ99732 RNA5SP450-201ENST00000411206 102 ntBASIC1.52□□□□□ -2.17
LITAFQ99732 AC006461.1-201ENST00000412637 326 ntBASIC1.52□□□□□ -2.17
LITAFQ99732 AC092017.2-201ENST00000427600 362 ntBASIC1.52□□□□□ -2.17
LITAFQ99732 AC069257.2-201ENST00000441819 155 ntBASIC1.52□□□□□ -2.17
LITAFQ99732 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.52□□□□□ -2.17
LITAFQ99732 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.52□□□□□ -2.17
LITAFQ99732 RNA5SP320-201ENST00000516263 124 ntBASIC1.52□□□□□ -2.17
LITAFQ99732 RNU7-149P-201ENST00000516739 59 ntBASIC1.52□□□□□ -2.17
LITAFQ99732 Y_RNA.703-201ENST00000516846 111 ntBASIC1.52□□□□□ -2.17
LITAFQ99732 RNU1-104P-201ENST00000517280 175 ntBASIC1.52□□□□□ -2.17
LITAFQ99732 SUB1P4-201ENST00000566062 339 ntBASIC1.52□□□□□ -2.17
LITAFQ99732 MIR4448-201ENST00000584360 86 ntBASIC1.52□□□□□ -2.17
LITAFQ99732 AC245884.12-201ENST00000615364 59 ntBASIC1.52□□□□□ -2.17
LITAFQ99732 MIR8054-201ENST00000620877 86 ntBASIC1.52□□□□□ -2.17
LITAFQ99732 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC1.52□□□□□ -2.17
LITAFQ99732 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
LITAFQ99732 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
LITAFQ99732 MIR126-201ENST00000362291 85 ntBASIC1.51□□□□□ -2.17
LITAFQ99732 SNORA63D-201ENST00000364359 132 ntBASIC1.51□□□□□ -2.17
LITAFQ99732 SNORA62.3-201ENST00000365110 153 ntBASIC1.51□□□□□ -2.17
LITAFQ99732 Y_RNA.432-201ENST00000384087 111 ntBASIC1.51□□□□□ -2.17
LITAFQ99732 RNU6-187P-201ENST00000384139 106 ntBASIC1.51□□□□□ -2.17
LITAFQ99732 MIR200C-201ENST00000384980 68 ntBASIC1.51□□□□□ -2.17
LITAFQ99732 RNU6-440P-201ENST00000390882 105 ntBASIC1.51□□□□□ -2.17
LITAFQ99732 MLLT10P1-201ENST00000418346 262 ntBASIC1.51□□□□□ -2.17
LITAFQ99732 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC1.51□□□□□ -2.17
LITAFQ99732 AC091390.1-201ENST00000433904 331 ntBASIC1.51□□□□□ -2.17
LITAFQ99732 AL021397.1-201ENST00000451806 248 ntBASIC1.51□□□□□ -2.17
LITAFQ99732 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.51□□□□□ -2.17
LITAFQ99732 OR9P1P-201ENST00000496431 281 ntBASIC1.51□□□□□ -2.17
LITAFQ99732 AC026436.1-201ENST00000510537 270 ntBASIC1.51□□□□□ -2.17
LITAFQ99732 RNU6-1299P-201ENST00000516316 100 ntBASIC1.51□□□□□ -2.17
LITAFQ99732 MIR4529-201ENST00000578110 78 ntBASIC1.51□□□□□ -2.17
LITAFQ99732 SNORD53-201ENST00000579969 78 ntBASIC1.51□□□□□ -2.17
LITAFQ99732 AL161756.2-201ENST00000604597 246 ntBASIC1.51□□□□□ -2.17
LITAFQ99732 MIR6840-201ENST00000611937 71 ntBASIC1.51□□□□□ -2.17
LITAFQ99732 MTND1P7-201ENST00000632801 297 ntBASIC1.51□□□□□ -2.17
LITAFQ99732 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.51□□□□□ -2.17
LITAFQ99732 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms