Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 MIR3616-201ENST00000584070 92 ntBASIC2.69□□□□□ -1.98
CDK5RAP1Q96SZ6 MIR3670-1-201ENST00000584160 65 ntBASIC2.69□□□□□ -1.98
CDK5RAP1Q96SZ6 MIR3670-3-201ENST00000584855 65 ntBASIC2.69□□□□□ -1.98
CDK5RAP1Q96SZ6 RNU6-91P-201ENST00000607774 107 ntBASIC2.69□□□□□ -1.98
CDK5RAP1Q96SZ6 MIR3670-4-201ENST00000612260 65 ntBASIC2.69□□□□□ -1.98
CDK5RAP1Q96SZ6 U4.3-201ENST00000621047 82 ntBASIC2.69□□□□□ -1.98
CDK5RAP1Q96SZ6 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.69□□□□□ -1.98
CDK5RAP1Q96SZ6 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.69□□□□□ -1.98
CDK5RAP1Q96SZ6 AC090517.3-201ENST00000625170 141 ntBASIC2.69□□□□□ -1.98
CDK5RAP1Q96SZ6 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
CDK5RAP1Q96SZ6 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CDK5RAP1Q96SZ6 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CDK5RAP1Q96SZ6 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
CDK5RAP1Q96SZ6 Y_RNA.52-201ENST00000362760 96 ntBASIC2.68□□□□□ -1.98
CDK5RAP1Q96SZ6 RNU6-944P-201ENST00000364023 107 ntBASIC2.68□□□□□ -1.98
CDK5RAP1Q96SZ6 Y_RNA.634-201ENST00000364811 113 ntBASIC2.68□□□□□ -1.98
CDK5RAP1Q96SZ6 MIR1283-1-201ENST00000408494 87 ntBASIC2.68□□□□□ -1.98
CDK5RAP1Q96SZ6 RN7SKP19-201ENST00000516016 252 ntBASIC2.68□□□□□ -1.98
CDK5RAP1Q96SZ6 RNU6-1299P-201ENST00000516316 100 ntBASIC2.68□□□□□ -1.98
CDK5RAP1Q96SZ6 RNU6-537P-201ENST00000517277 103 ntBASIC2.68□□□□□ -1.98
CDK5RAP1Q96SZ6 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.68□□□□□ -1.98
CDK5RAP1Q96SZ6 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.68□□□□□ -1.98
CDK5RAP1Q96SZ6 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.68□□□□□ -1.98
CDK5RAP1Q96SZ6 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.68□□□□□ -1.98
CDK5RAP1Q96SZ6 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.68□□□□□ -1.98
CDK5RAP1Q96SZ6 RNU6-674P-201ENST00000363831 107 ntBASIC2.67□□□□□ -1.98
CDK5RAP1Q96SZ6 RNU6-418P-201ENST00000384035 107 ntBASIC2.67□□□□□ -1.98
CDK5RAP1Q96SZ6 RNU6-106P-201ENST00000384405 107 ntBASIC2.67□□□□□ -1.98
CDK5RAP1Q96SZ6 MIR592-201ENST00000384959 97 ntBASIC2.67□□□□□ -1.98
CDK5RAP1Q96SZ6 MIRLET7F2-201ENST00000385277 83 ntBASIC2.67□□□□□ -1.98
CDK5RAP1Q96SZ6 AL603914.1-201ENST00000401964 204 ntBASIC2.67□□□□□ -1.98
CDK5RAP1Q96SZ6 RNU6-554P-201ENST00000410466 106 ntBASIC2.67□□□□□ -1.98
CDK5RAP1Q96SZ6 RNU2-70P-201ENST00000410718 179 ntBASIC2.67□□□□□ -1.98
CDK5RAP1Q96SZ6 RNU2-32P-201ENST00000411193 191 ntBASIC2.67□□□□□ -1.98
CDK5RAP1Q96SZ6 AC016909.1-201ENST00000415916 166 ntBASIC2.67□□□□□ -1.98
CDK5RAP1Q96SZ6 SUMO1P4-201ENST00000429430 302 ntBASIC2.67□□□□□ -1.98
CDK5RAP1Q96SZ6 AC010531.2-201ENST00000465012 153 ntBASIC2.67□□□□□ -1.98
CDK5RAP1Q96SZ6 RN7SL297P-201ENST00000483161 293 ntBASIC2.67□□□□□ -1.98
CDK5RAP1Q96SZ6 Y_RNA.677-201ENST00000516401 85 ntBASIC2.67□□□□□ -1.98
CDK5RAP1Q96SZ6 MIR4446-201ENST00000578505 67 ntBASIC2.67□□□□□ -1.98
CDK5RAP1Q96SZ6 MIR3117-201ENST00000584034 78 ntBASIC2.67□□□□□ -1.98
CDK5RAP1Q96SZ6 AC091178.2-201ENST00000584401 117 ntBASIC2.67□□□□□ -1.98
CDK5RAP1Q96SZ6 AL022345.2-201ENST00000606307 135 ntBASIC2.67□□□□□ -1.98
CDK5RAP1Q96SZ6 AC025166.1-201ENST00000612411 163 ntBASIC2.67□□□□□ -1.98
CDK5RAP1Q96SZ6 MTND5P18-201ENST00000445624 1801 ntBASIC2.67□□□□□ -1.98
CDK5RAP1Q96SZ6 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
CDK5RAP1Q96SZ6 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
CDK5RAP1Q96SZ6 SNORA25.6-201ENST00000364121 118 ntBASIC2.66□□□□□ -1.98
CDK5RAP1Q96SZ6 RNU6-461P-201ENST00000364195 107 ntBASIC2.66□□□□□ -1.98
CDK5RAP1Q96SZ6 SNORD73B-201ENST00000364394 72 ntBASIC2.66□□□□□ -1.98
CDK5RAP1Q96SZ6 RNU6-117P-201ENST00000365415 107 ntBASIC2.66□□□□□ -1.98
CDK5RAP1Q96SZ6 RNU6-32P-201ENST00000383948 107 ntBASIC2.66□□□□□ -1.98
CDK5RAP1Q96SZ6 RNU6-13P-201ENST00000384248 107 ntBASIC2.66□□□□□ -1.98
CDK5RAP1Q96SZ6 RNU6-905P-201ENST00000384434 107 ntBASIC2.66□□□□□ -1.98
CDK5RAP1Q96SZ6 RNU6-12P-201ENST00000384604 107 ntBASIC2.66□□□□□ -1.98
CDK5RAP1Q96SZ6 RNU6-41P-201ENST00000384741 107 ntBASIC2.66□□□□□ -1.98
CDK5RAP1Q96SZ6 RNA5SP496-201ENST00000391240 109 ntBASIC2.66□□□□□ -1.98
CDK5RAP1Q96SZ6 MIR1263-201ENST00000408324 86 ntBASIC2.66□□□□□ -1.98
CDK5RAP1Q96SZ6 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.66□□□□□ -1.98
CDK5RAP1Q96SZ6 AL445687.1-201ENST00000439946 251 ntBASIC2.66□□□□□ -1.98
CDK5RAP1Q96SZ6 AL513328.1-201ENST00000446460 224 ntBASIC2.66□□□□□ -1.98
CDK5RAP1Q96SZ6 AL031737.1-201ENST00000450125 223 ntBASIC2.66□□□□□ -1.98
CDK5RAP1Q96SZ6 AL441985.1-201ENST00000457727 251 ntBASIC2.66□□□□□ -1.98
CDK5RAP1Q96SZ6 RNA5SP148-201ENST00000516527 94 ntBASIC2.66□□□□□ -1.98
CDK5RAP1Q96SZ6 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.66□□□□□ -1.98
CDK5RAP1Q96SZ6 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.98
CDK5RAP1Q96SZ6 SNORA51.10-201ENST00000384418 136 ntBASIC2.65□□□□□ -1.99
CDK5RAP1Q96SZ6 RNU6-880P-201ENST00000384526 107 ntBASIC2.65□□□□□ -1.99
CDK5RAP1Q96SZ6 Y_RNA.549-201ENST00000384657 102 ntBASIC2.65□□□□□ -1.99
CDK5RAP1Q96SZ6 EIF4EP4-201ENST00000424916 578 ntBASIC2.65□□□□□ -1.99
CDK5RAP1Q96SZ6 RPS4XP11-201ENST00000446897 772 ntBASIC2.65□□□□□ -1.99
CDK5RAP1Q96SZ6 RNU6-221P-201ENST00000459541 99 ntBASIC2.65□□□□□ -1.99
CDK5RAP1Q96SZ6 SNORD77.4-201ENST00000516158 81 ntBASIC2.65□□□□□ -1.99
CDK5RAP1Q96SZ6 RNU7-116P-201ENST00000516940 62 ntBASIC2.65□□□□□ -1.99
CDK5RAP1Q96SZ6 AC109329.2-201ENST00000519658 482 ntBASIC2.65□□□□□ -1.99
CDK5RAP1Q96SZ6 AC007751.1-201ENST00000529260 376 ntBASIC2.65□□□□□ -1.99
CDK5RAP1Q96SZ6 AC079598.5-201ENST00000547460 117 ntBASIC2.65□□□□□ -1.99
CDK5RAP1Q96SZ6 uc_338.4-201ENST00000616635 176 ntBASIC2.65□□□□□ -1.99
CDK5RAP1Q96SZ6 CTSLP2-204ENST00000629029 392 ntBASIC2.65□□□□□ -1.99
CDK5RAP1Q96SZ6 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
CDK5RAP1Q96SZ6 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CDK5RAP1Q96SZ6 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CDK5RAP1Q96SZ6 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CDK5RAP1Q96SZ6 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CDK5RAP1Q96SZ6 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
CDK5RAP1Q96SZ6 RNU6-640P-201ENST00000363693 105 ntBASIC2.64□□□□□ -1.99
CDK5RAP1Q96SZ6 RNU4-13P-201ENST00000364019 141 ntBASIC2.64□□□□□ -1.99
CDK5RAP1Q96SZ6 Y_RNA.796-201ENST00000364268 102 ntBASIC2.64□□□□□ -1.99
CDK5RAP1Q96SZ6 Y_RNA.799-201ENST00000364992 102 ntBASIC2.64□□□□□ -1.99
CDK5RAP1Q96SZ6 Y_RNA.369-201ENST00000365568 117 ntBASIC2.64□□□□□ -1.99
CDK5RAP1Q96SZ6 SNORD18B-201ENST00000365659 72 ntBASIC2.64□□□□□ -1.99
CDK5RAP1Q96SZ6 SNORA1-201ENST00000384107 130 ntBASIC2.64□□□□□ -1.99
CDK5RAP1Q96SZ6 RNU6-975P-201ENST00000384296 105 ntBASIC2.64□□□□□ -1.99
CDK5RAP1Q96SZ6 Y_RNA.486-201ENST00000384398 107 ntBASIC2.64□□□□□ -1.99
CDK5RAP1Q96SZ6 RNU6-1274P-201ENST00000384557 107 ntBASIC2.64□□□□□ -1.99
CDK5RAP1Q96SZ6 AC104389.3-201ENST00000445629 235 ntBASIC2.64□□□□□ -1.99
CDK5RAP1Q96SZ6 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC2.64□□□□□ -1.99
CDK5RAP1Q96SZ6 SNORD11-201ENST00000459124 84 ntBASIC2.64□□□□□ -1.99
CDK5RAP1Q96SZ6 AC010598.1-201ENST00000510378 103 ntBASIC2.64□□□□□ -1.99
CDK5RAP1Q96SZ6 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 137.9 ms