Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 MIR4308-201ENST00000580634 81 ntBASIC0.95□□□□□ -2.26
HMCN1Q96RW7 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC0.95□□□□□ -2.26
HMCN1Q96RW7 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC0.95□□□□□ -2.26
HMCN1Q96RW7 Y_RNA.402-201ENST00000383972 102 ntBASIC0.95□□□□□ -2.26
HMCN1Q96RW7 RNU4-22P-201ENST00000411058 166 ntBASIC0.95□□□□□ -2.26
HMCN1Q96RW7 AL513331.1-201ENST00000411908 397 ntBASIC0.95□□□□□ -2.26
HMCN1Q96RW7 EI24P1-201ENST00000416584 867 ntBASIC0.95□□□□□ -2.26
HMCN1Q96RW7 RPL23AP62-201ENST00000463396 453 ntBASIC0.95□□□□□ -2.26
HMCN1Q96RW7 AC090666.1-201ENST00000578241 445 ntBASIC0.95□□□□□ -2.26
HMCN1Q96RW7 AC007687.1-201ENST00000602704 304 ntBASIC0.95□□□□□ -2.26
HMCN1Q96RW7 AL359075.3-201ENST00000613288 217 ntBASIC0.95□□□□□ -2.26
HMCN1Q96RW7 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC0.95□□□□□ -2.26
HMCN1Q96RW7 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
HMCN1Q96RW7 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
HMCN1Q96RW7 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
HMCN1Q96RW7 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC0.94□□□□□ -2.26
HMCN1Q96RW7 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC0.94□□□□□ -2.26
HMCN1Q96RW7 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
HMCN1Q96RW7 Y_RNA.5-201ENST00000362334 102 ntBASIC0.94□□□□□ -2.26
HMCN1Q96RW7 RNA5SP93-201ENST00000362525 114 ntBASIC0.94□□□□□ -2.26
HMCN1Q96RW7 RNU6-487P-201ENST00000365430 104 ntBASIC0.94□□□□□ -2.26
HMCN1Q96RW7 HMGB3P31-201ENST00000413333 595 ntBASIC0.94□□□□□ -2.26
HMCN1Q96RW7 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.94□□□□□ -2.26
HMCN1Q96RW7 HMGB1P47-201ENST00000511281 589 ntBASIC0.94□□□□□ -2.26
HMCN1Q96RW7 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.94□□□□□ -2.26
HMCN1Q96RW7 RNU6-1213P-201ENST00000517075 94 ntBASIC0.94□□□□□ -2.26
HMCN1Q96RW7 EIF1P6-201ENST00000600054 334 ntBASIC0.94□□□□□ -2.26
HMCN1Q96RW7 5S_rRNA.12-201ENST00000617631 107 ntBASIC0.94□□□□□ -2.26
HMCN1Q96RW7 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC0.94□□□□□ -2.26
HMCN1Q96RW7 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
HMCN1Q96RW7 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
HMCN1Q96RW7 MIR335-201ENST00000362173 94 ntBASIC0.94□□□□□ -2.26
HMCN1Q96RW7 SNORD45.2-201ENST00000363552 72 ntBASIC0.94□□□□□ -2.26
HMCN1Q96RW7 Y_RNA.496-201ENST00000384444 101 ntBASIC0.94□□□□□ -2.26
HMCN1Q96RW7 MIR627-201ENST00000384979 97 ntBASIC0.94□□□□□ -2.26
HMCN1Q96RW7 MIR137-201ENST00000385223 102 ntBASIC0.94□□□□□ -2.26
HMCN1Q96RW7 AC006548.1-201ENST00000427470 102 ntBASIC0.94□□□□□ -2.26
HMCN1Q96RW7 OR51B8P-201ENST00000449892 769 ntBASIC0.94□□□□□ -2.26
HMCN1Q96RW7 snoU13.2-201ENST00000459201 104 ntBASIC0.94□□□□□ -2.26
HMCN1Q96RW7 AC016632.1-201ENST00000503994 196 ntBASIC0.94□□□□□ -2.26
HMCN1Q96RW7 VTRNA2-2P-201ENST00000516091 103 ntBASIC0.94□□□□□ -2.26
HMCN1Q96RW7 RNU6-1191P-201ENST00000516799 107 ntBASIC0.94□□□□□ -2.26
HMCN1Q96RW7 RNU6-897P-201ENST00000517135 105 ntBASIC0.94□□□□□ -2.26
HMCN1Q96RW7 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
HMCN1Q96RW7 AC090502.2-201ENST00000549267 280 ntBASIC0.94□□□□□ -2.26
HMCN1Q96RW7 AC026371.1-201ENST00000551867 419 ntBASIC0.94□□□□□ -2.26
HMCN1Q96RW7 RMST_8.1-201ENST00000610287 165 ntBASIC0.94□□□□□ -2.26
HMCN1Q96RW7 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.94□□□□□ -2.26
HMCN1Q96RW7 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.94□□□□□ -2.26
HMCN1Q96RW7 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
HMCN1Q96RW7 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC0.94□□□□□ -2.26
HMCN1Q96RW7 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
HMCN1Q96RW7 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
HMCN1Q96RW7 HSPE1P11-201ENST00000339579 310 ntBASIC0.94□□□□□ -2.26
HMCN1Q96RW7 Y_RNA.79-201ENST00000362992 113 ntBASIC0.94□□□□□ -2.26
HMCN1Q96RW7 EI24P2-201ENST00000397776 1076 ntBASIC0.94□□□□□ -2.26
HMCN1Q96RW7 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.94□□□□□ -2.26
HMCN1Q96RW7 MIR1468-201ENST00000410600 86 ntBASIC0.94□□□□□ -2.26
HMCN1Q96RW7 RNU2-66P-201ENST00000410650 161 ntBASIC0.94□□□□□ -2.26
HMCN1Q96RW7 RPS26P4-201ENST00000431743 355 ntBASIC0.94□□□□□ -2.26
HMCN1Q96RW7 AC009969.1-201ENST00000438726 172 ntBASIC0.94□□□□□ -2.26
HMCN1Q96RW7 AC007969.2-201ENST00000441891 191 ntBASIC0.94□□□□□ -2.26
HMCN1Q96RW7 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
HMCN1Q96RW7 IGHVIII-38-1-201ENST00000521454 282 ntBASIC0.94□□□□□ -2.26
HMCN1Q96RW7 AC104417.1-201ENST00000523974 751 ntBASIC0.94□□□□□ -2.26
HMCN1Q96RW7 CYP4A43P-201ENST00000568156 121 ntBASIC0.94□□□□□ -2.26
HMCN1Q96RW7 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC0.94□□□□□ -2.26
HMCN1Q96RW7 uc_338.1-201ENST00000612113 180 ntBASIC0.94□□□□□ -2.26
HMCN1Q96RW7 Y_RNA.74-201ENST00000362911 99 ntBASIC0.94□□□□□ -2.26
HMCN1Q96RW7 Y_RNA.106-201ENST00000363189 100 ntBASIC0.94□□□□□ -2.26
HMCN1Q96RW7 Y_RNA.114-201ENST00000363265 113 ntBASIC0.94□□□□□ -2.26
HMCN1Q96RW7 Y_RNA.143-201ENST00000363520 106 ntBASIC0.94□□□□□ -2.26
HMCN1Q96RW7 SNORA51.11-201ENST00000384442 131 ntBASIC0.94□□□□□ -2.26
HMCN1Q96RW7 RNU6-160P-201ENST00000384591 107 ntBASIC0.94□□□□□ -2.26
HMCN1Q96RW7 RNA5SP292-201ENST00000390974 118 ntBASIC0.94□□□□□ -2.26
HMCN1Q96RW7 RNU2-17P-201ENST00000410290 190 ntBASIC0.94□□□□□ -2.26
HMCN1Q96RW7 SNRPEP7-201ENST00000438350 220 ntBASIC0.94□□□□□ -2.26
HMCN1Q96RW7 AC099506.2-201ENST00000623074 221 ntBASIC0.94□□□□□ -2.26
HMCN1Q96RW7 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
HMCN1Q96RW7 SNORD3E-201ENST00000362899 217 ntBASIC0.93□□□□□ -2.26
HMCN1Q96RW7 Y_RNA.157-201ENST00000363638 102 ntBASIC0.93□□□□□ -2.26
HMCN1Q96RW7 Y_RNA.337-201ENST00000365312 102 ntBASIC0.93□□□□□ -2.26
HMCN1Q96RW7 Y_RNA.397-201ENST00000383950 98 ntBASIC0.93□□□□□ -2.26
HMCN1Q96RW7 Y_RNA.433-201ENST00000384089 102 ntBASIC0.93□□□□□ -2.26
HMCN1Q96RW7 Y_RNA.445-201ENST00000384168 102 ntBASIC0.93□□□□□ -2.26
HMCN1Q96RW7 RNU6-360P-201ENST00000390944 104 ntBASIC0.93□□□□□ -2.26
HMCN1Q96RW7 RNU6-823P-201ENST00000391042 103 ntBASIC0.93□□□□□ -2.26
HMCN1Q96RW7 AP000567.1-201ENST00000406413 156 ntBASIC0.93□□□□□ -2.26
HMCN1Q96RW7 RNA5SP475-201ENST00000410568 110 ntBASIC0.93□□□□□ -2.26
HMCN1Q96RW7 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC0.93□□□□□ -2.26
HMCN1Q96RW7 IGLV3-17-201ENST00000519099 244 ntBASIC0.93□□□□□ -2.26
HMCN1Q96RW7 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC0.93□□□□□ -2.26
HMCN1Q96RW7 IGKV1OR2-6-201ENST00000603485 277 ntBASIC0.93□□□□□ -2.26
HMCN1Q96RW7 AC004223.4-201ENST00000612426 332 ntBASIC0.93□□□□□ -2.26
HMCN1Q96RW7 AC103858.2-201ENST00000621471 543 ntBASIC0.93□□□□□ -2.26
HMCN1Q96RW7 SNORD3E-202ENST00000627253 216 ntBASIC0.93□□□□□ -2.26
HMCN1Q96RW7 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
HMCN1Q96RW7 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC0.93□□□□□ -2.26
HMCN1Q96RW7 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC0.93□□□□□ -2.26
HMCN1Q96RW7 U8.3-201ENST00000363321 132 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms