Protein–RNA interactions for Protein: Q96JY6

PDLIM2, PDZ and LIM domain protein 2, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2Q96JY6 RNU6-136P-201ENST00000384663 107 ntBASIC2.38□□□□□ -2.03
PDLIM2Q96JY6 Y_RNA.586-201ENST00000391146 98 ntBASIC2.38□□□□□ -2.03
PDLIM2Q96JY6 MIR513C-201ENST00000401352 84 ntBASIC2.38□□□□□ -2.03
PDLIM2Q96JY6 RNU6-257P-201ENST00000410238 98 ntBASIC2.38□□□□□ -2.03
PDLIM2Q96JY6 CYP2C59P-201ENST00000457790 269 ntBASIC2.38□□□□□ -2.03
PDLIM2Q96JY6 AC080013.2-201ENST00000460866 323 ntBASIC2.38□□□□□ -2.03
PDLIM2Q96JY6 RPS27P22-201ENST00000478056 241 ntBASIC2.38□□□□□ -2.03
PDLIM2Q96JY6 AC023141.11-201ENST00000508864 202 ntBASIC2.38□□□□□ -2.03
PDLIM2Q96JY6 SNORA25.12-201ENST00000516202 82 ntBASIC2.38□□□□□ -2.03
PDLIM2Q96JY6 RNA5SP148-201ENST00000516527 94 ntBASIC2.38□□□□□ -2.03
PDLIM2Q96JY6 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.38□□□□□ -2.03
PDLIM2Q96JY6 AC006435.5-201ENST00000624486 112 ntBASIC2.38□□□□□ -2.03
PDLIM2Q96JY6 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
PDLIM2Q96JY6 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
PDLIM2Q96JY6 AC100821.1-201ENST00000523153 2479 ntBASIC2.37□□□□□ -2.03
PDLIM2Q96JY6 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
PDLIM2Q96JY6 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
PDLIM2Q96JY6 RNU6-199P-201ENST00000362954 107 ntBASIC2.37□□□□□ -2.03
PDLIM2Q96JY6 RNU6-643P-201ENST00000384018 107 ntBASIC2.37□□□□□ -2.03
PDLIM2Q96JY6 RNU6-417P-201ENST00000384712 107 ntBASIC2.37□□□□□ -2.03
PDLIM2Q96JY6 RNA5SP511-201ENST00000410487 115 ntBASIC2.37□□□□□ -2.03
PDLIM2Q96JY6 AC016909.1-201ENST00000415916 166 ntBASIC2.37□□□□□ -2.03
PDLIM2Q96JY6 RPL30P13-201ENST00000418873 348 ntBASIC2.37□□□□□ -2.03
PDLIM2Q96JY6 AC010154.1-201ENST00000425857 269 ntBASIC2.37□□□□□ -2.03
PDLIM2Q96JY6 RNU6-437P-201ENST00000459408 95 ntBASIC2.37□□□□□ -2.03
PDLIM2Q96JY6 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.37□□□□□ -2.03
PDLIM2Q96JY6 RNU6-62P-201ENST00000516526 102 ntBASIC2.37□□□□□ -2.03
PDLIM2Q96JY6 RNU2-34P-201ENST00000516534 121 ntBASIC2.37□□□□□ -2.03
PDLIM2Q96JY6 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.37□□□□□ -2.03
PDLIM2Q96JY6 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.37□□□□□ -2.03
PDLIM2Q96JY6 RNU1-23P-201ENST00000363361 144 ntBASIC2.36□□□□□ -2.03
PDLIM2Q96JY6 RNU6-22P-201ENST00000384355 107 ntBASIC2.36□□□□□ -2.03
PDLIM2Q96JY6 SNORA67.4-201ENST00000384688 142 ntBASIC2.36□□□□□ -2.03
PDLIM2Q96JY6 SNORD37.2-201ENST00000391075 66 ntBASIC2.36□□□□□ -2.03
PDLIM2Q96JY6 AC010531.2-201ENST00000465012 153 ntBASIC2.36□□□□□ -2.03
PDLIM2Q96JY6 AC234781.5-201ENST00000508429 271 ntBASIC2.36□□□□□ -2.03
PDLIM2Q96JY6 RNA5SP200-201ENST00000516360 103 ntBASIC2.36□□□□□ -2.03
PDLIM2Q96JY6 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
PDLIM2Q96JY6 AC010332.2-201ENST00000613083 1904 ntBASIC2.36□□□□□ -2.03
PDLIM2Q96JY6 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.36□□□□□ -2.03
PDLIM2Q96JY6 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.36□□□□□ -2.03
PDLIM2Q96JY6 AC080100.1-201ENST00000624239 5356 ntBASIC2.35□□□□□ -2.03
PDLIM2Q96JY6 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
PDLIM2Q96JY6 RNU4-41P-201ENST00000364426 143 ntBASIC2.35□□□□□ -2.03
PDLIM2Q96JY6 Y_RNA.500-201ENST00000384466 111 ntBASIC2.35□□□□□ -2.03
PDLIM2Q96JY6 Y_RNA.521-201ENST00000384560 114 ntBASIC2.35□□□□□ -2.03
PDLIM2Q96JY6 RNU2-51P-201ENST00000410708 197 ntBASIC2.35□□□□□ -2.03
PDLIM2Q96JY6 Y_RNA.622-201ENST00000411091 108 ntBASIC2.35□□□□□ -2.03
PDLIM2Q96JY6 MTATP6P29-201ENST00000415057 132 ntBASIC2.35□□□□□ -2.03
PDLIM2Q96JY6 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.35□□□□□ -2.03
PDLIM2Q96JY6 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.35□□□□□ -2.03
PDLIM2Q96JY6 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.35□□□□□ -2.03
PDLIM2Q96JY6 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.35□□□□□ -2.03
PDLIM2Q96JY6 RN7SL274P-201ENST00000492268 272 ntBASIC2.35□□□□□ -2.03
PDLIM2Q96JY6 RNU6-991P-201ENST00000516168 107 ntBASIC2.35□□□□□ -2.03
PDLIM2Q96JY6 MIR514B-201ENST00000516774 80 ntBASIC2.35□□□□□ -2.03
PDLIM2Q96JY6 RNA5SP364-201ENST00000516938 78 ntBASIC2.35□□□□□ -2.03
PDLIM2Q96JY6 AC015720.1-201ENST00000565251 277 ntBASIC2.35□□□□□ -2.03
PDLIM2Q96JY6 AL031274.2-201ENST00000599419 203 ntBASIC2.35□□□□□ -2.03
PDLIM2Q96JY6 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.35□□□□□ -2.03
PDLIM2Q96JY6 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
PDLIM2Q96JY6 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
PDLIM2Q96JY6 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.35□□□□□ -2.03
PDLIM2Q96JY6 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
PDLIM2Q96JY6 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.34□□□□□ -2.03
PDLIM2Q96JY6 CENPCP1-201ENST00000533085 2578 ntBASIC2.34□□□□□ -2.03
PDLIM2Q96JY6 RNU6-117P-201ENST00000365415 107 ntBASIC2.34□□□□□ -2.03
PDLIM2Q96JY6 RNY3P5-201ENST00000384127 102 ntBASIC2.34□□□□□ -2.03
PDLIM2Q96JY6 SNORA20-201ENST00000384662 132 ntBASIC2.34□□□□□ -2.03
PDLIM2Q96JY6 MIR95-201ENST00000385072 81 ntBASIC2.34□□□□□ -2.03
PDLIM2Q96JY6 SNORA40-201ENST00000388090 126 ntBASIC2.34□□□□□ -2.03
PDLIM2Q96JY6 RNU6-1154P-201ENST00000391001 104 ntBASIC2.34□□□□□ -2.03
PDLIM2Q96JY6 RNU2-63P-201ENST00000410792 194 ntBASIC2.34□□□□□ -2.03
PDLIM2Q96JY6 RNU2-40P-201ENST00000410833 196 ntBASIC2.34□□□□□ -2.03
PDLIM2Q96JY6 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.34□□□□□ -2.03
PDLIM2Q96JY6 MTCO1P44-201ENST00000441935 243 ntBASIC2.34□□□□□ -2.03
PDLIM2Q96JY6 AC093259.1-201ENST00000509755 300 ntBASIC2.34□□□□□ -2.03
PDLIM2Q96JY6 SNORA4.4-201ENST00000515921 135 ntBASIC2.34□□□□□ -2.03
PDLIM2Q96JY6 AC112693.2-201ENST00000556538 232 ntBASIC2.34□□□□□ -2.03
PDLIM2Q96JY6 AL355297.2-201ENST00000604792 129 ntBASIC2.34□□□□□ -2.03
PDLIM2Q96JY6 AC012640.5-201ENST00000623897 319 ntBASIC2.34□□□□□ -2.03
PDLIM2Q96JY6 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.04
PDLIM2Q96JY6 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
PDLIM2Q96JY6 ZNF702P-202ENST00000434269 1966 ntBASIC2.33□□□□□ -2.04
PDLIM2Q96JY6 RNU6-674P-201ENST00000363831 107 ntBASIC2.33□□□□□ -2.04
PDLIM2Q96JY6 MIR627-201ENST00000384979 97 ntBASIC2.33□□□□□ -2.04
PDLIM2Q96JY6 MIR221-201ENST00000385135 110 ntBASIC2.33□□□□□ -2.04
PDLIM2Q96JY6 Y_RNA.587-201ENST00000391210 103 ntBASIC2.33□□□□□ -2.04
PDLIM2Q96JY6 RNA5SP496-201ENST00000391240 109 ntBASIC2.33□□□□□ -2.04
PDLIM2Q96JY6 AL512604.1-201ENST00000404812 257 ntBASIC2.33□□□□□ -2.04
PDLIM2Q96JY6 MIR1253-201ENST00000408273 105 ntBASIC2.33□□□□□ -2.04
PDLIM2Q96JY6 MIR1278-201ENST00000408753 81 ntBASIC2.33□□□□□ -2.04
PDLIM2Q96JY6 RNA5SP489-201ENST00000410986 109 ntBASIC2.33□□□□□ -2.04
PDLIM2Q96JY6 AC123900.1-201ENST00000420390 96 ntBASIC2.33□□□□□ -2.04
PDLIM2Q96JY6 AL357134.1-201ENST00000445848 426 ntBASIC2.33□□□□□ -2.04
PDLIM2Q96JY6 RNU6-313P-201ENST00000516317 112 ntBASIC2.33□□□□□ -2.04
PDLIM2Q96JY6 RNU6-479P-201ENST00000516348 105 ntBASIC2.33□□□□□ -2.04
PDLIM2Q96JY6 SNORA48.11-201ENST00000517015 89 ntBASIC2.33□□□□□ -2.04
PDLIM2Q96JY6 RNU7-172P-201ENST00000517125 64 ntBASIC2.33□□□□□ -2.04
PDLIM2Q96JY6 MIR4438-201ENST00000585271 93 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 202.1 ms