Protein–RNA interactions for Protein: Q96DD7

SHISA4, Protein shisa-4, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4Q96DD7 RNU6-438P-201ENST00000365561 103 ntBASIC2.99□□□□□ -1.93
SHISA4Q96DD7 DYNLT3P1-201ENST00000378574 347 ntBASIC2.99□□□□□ -1.93
SHISA4Q96DD7 RNU6-1083P-201ENST00000384022 107 ntBASIC2.99□□□□□ -1.93
SHISA4Q96DD7 RNU6-1235P-201ENST00000384559 107 ntBASIC2.99□□□□□ -1.93
SHISA4Q96DD7 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
SHISA4Q96DD7 RNA5SP210-201ENST00000391034 120 ntBASIC2.99□□□□□ -1.93
SHISA4Q96DD7 SNORA40.5-201ENST00000391061 128 ntBASIC2.99□□□□□ -1.93
SHISA4Q96DD7 SNORD88.1-201ENST00000408684 91 ntBASIC2.99□□□□□ -1.93
SHISA4Q96DD7 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.99□□□□□ -1.93
SHISA4Q96DD7 AC104332.2-201ENST00000429959 156 ntBASIC2.99□□□□□ -1.93
SHISA4Q96DD7 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.99□□□□□ -1.93
SHISA4Q96DD7 RNU6-498P-201ENST00000459468 107 ntBASIC2.99□□□□□ -1.93
SHISA4Q96DD7 RPS27P22-201ENST00000478056 241 ntBASIC2.99□□□□□ -1.93
SHISA4Q96DD7 RNU6-126P-201ENST00000516685 103 ntBASIC2.99□□□□□ -1.93
SHISA4Q96DD7 AC108081.1-201ENST00000604358 221 ntBASIC2.99□□□□□ -1.93
SHISA4Q96DD7 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.98□□□□□ -1.93
SHISA4Q96DD7 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SHISA4Q96DD7 Y_RNA.164-201ENST00000363709 102 ntBASIC2.98□□□□□ -1.93
SHISA4Q96DD7 Y_RNA.203-201ENST00000364106 102 ntBASIC2.98□□□□□ -1.93
SHISA4Q96DD7 RNU6-647P-201ENST00000364243 107 ntBASIC2.98□□□□□ -1.93
SHISA4Q96DD7 Y_RNA.280-201ENST00000364765 112 ntBASIC2.98□□□□□ -1.93
SHISA4Q96DD7 RNU6-1274P-201ENST00000384557 107 ntBASIC2.98□□□□□ -1.93
SHISA4Q96DD7 AL603914.1-201ENST00000401964 204 ntBASIC2.98□□□□□ -1.93
SHISA4Q96DD7 MLLT10P1-201ENST00000418346 262 ntBASIC2.98□□□□□ -1.93
SHISA4Q96DD7 CKS1BP2-201ENST00000497342 240 ntBASIC2.98□□□□□ -1.93
SHISA4Q96DD7 ATP5EP1-201ENST00000510257 156 ntBASIC2.98□□□□□ -1.93
SHISA4Q96DD7 SNORA72.7-201ENST00000516349 94 ntBASIC2.98□□□□□ -1.93
SHISA4Q96DD7 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.98□□□□□ -1.93
SHISA4Q96DD7 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.98□□□□□ -1.93
SHISA4Q96DD7 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.98□□□□□ -1.93
SHISA4Q96DD7 Z82209.1-201ENST00000422141 2135 ntBASIC2.98□□□□□ -1.93
SHISA4Q96DD7 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SHISA4Q96DD7 RNU6-117P-201ENST00000365415 107 ntBASIC2.97□□□□□ -1.93
SHISA4Q96DD7 RNU6-418P-201ENST00000384035 107 ntBASIC2.97□□□□□ -1.93
SHISA4Q96DD7 SNORD77.4-201ENST00000516158 81 ntBASIC2.97□□□□□ -1.93
SHISA4Q96DD7 RNU2-34P-201ENST00000516534 121 ntBASIC2.97□□□□□ -1.93
SHISA4Q96DD7 Y_RNA.690-201ENST00000516603 95 ntBASIC2.97□□□□□ -1.93
SHISA4Q96DD7 RPL23AP91-201ENST00000569211 455 ntBASIC2.97□□□□□ -1.93
SHISA4Q96DD7 AL929325.1-201ENST00000603096 117 ntBASIC2.97□□□□□ -1.93
SHISA4Q96DD7 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SHISA4Q96DD7 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
SHISA4Q96DD7 AC080128.1-201ENST00000474389 1917 ntBASIC2.97□□□□□ -1.93
SHISA4Q96DD7 AC091564.4-201ENST00000533934 2194 ntBASIC2.97□□□□□ -1.93
SHISA4Q96DD7 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.93
SHISA4Q96DD7 MTND5P32-201ENST00000560711 1802 ntBASIC2.96□□□□□ -1.94
SHISA4Q96DD7 AL021368.2-201ENST00000606125 5352 ntBASIC2.96□□□□□ -1.94
SHISA4Q96DD7 RNU6-944P-201ENST00000364023 107 ntBASIC2.96□□□□□ -1.94
SHISA4Q96DD7 Y_RNA.634-201ENST00000364811 113 ntBASIC2.96□□□□□ -1.94
SHISA4Q96DD7 MIR548A3-201ENST00000385297 97 ntBASIC2.96□□□□□ -1.94
SHISA4Q96DD7 RPL30P4-201ENST00000429309 333 ntBASIC2.96□□□□□ -1.94
SHISA4Q96DD7 SNORD33.1-201ENST00000516213 88 ntBASIC2.96□□□□□ -1.94
SHISA4Q96DD7 RNU6-586P-201ENST00000517265 104 ntBASIC2.96□□□□□ -1.94
SHISA4Q96DD7 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
SHISA4Q96DD7 AC105245.1-201ENST00000581934 244 ntBASIC2.96□□□□□ -1.94
SHISA4Q96DD7 AC097639.2-201ENST00000603159 172 ntBASIC2.96□□□□□ -1.94
SHISA4Q96DD7 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
SHISA4Q96DD7 AL161431.1-201ENST00000618966 4205 ntBASIC2.96□□□□□ -1.94
SHISA4Q96DD7 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
SHISA4Q96DD7 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.95□□□□□ -1.94
SHISA4Q96DD7 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
SHISA4Q96DD7 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SHISA4Q96DD7 SNORD114-1-201ENST00000362705 72 ntBASIC2.95□□□□□ -1.94
SHISA4Q96DD7 Y_RNA.226-201ENST00000364337 114 ntBASIC2.95□□□□□ -1.94
SHISA4Q96DD7 Y_RNA.309-201ENST00000365046 111 ntBASIC2.95□□□□□ -1.94
SHISA4Q96DD7 SNORD116-21-201ENST00000384507 92 ntBASIC2.95□□□□□ -1.94
SHISA4Q96DD7 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
SHISA4Q96DD7 RN7SKP123-201ENST00000410732 291 ntBASIC2.95□□□□□ -1.94
SHISA4Q96DD7 AC063976.4-201ENST00000421971 163 ntBASIC2.95□□□□□ -1.94
SHISA4Q96DD7 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.95□□□□□ -1.94
SHISA4Q96DD7 HMGN2P23-201ENST00000456759 269 ntBASIC2.95□□□□□ -1.94
SHISA4Q96DD7 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.95□□□□□ -1.94
SHISA4Q96DD7 SNORA18.4-201ENST00000516440 124 ntBASIC2.95□□□□□ -1.94
SHISA4Q96DD7 AC018630.3-201ENST00000542637 96 ntBASIC2.95□□□□□ -1.94
SHISA4Q96DD7 MIR4662B-201ENST00000579498 81 ntBASIC2.95□□□□□ -1.94
SHISA4Q96DD7 AL353997.5-201ENST00000618886 171 ntBASIC2.95□□□□□ -1.94
SHISA4Q96DD7 AL121890.5-201ENST00000620848 304 ntBASIC2.95□□□□□ -1.94
SHISA4Q96DD7 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.95□□□□□ -1.94
SHISA4Q96DD7 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.95□□□□□ -1.94
SHISA4Q96DD7 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SHISA4Q96DD7 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SHISA4Q96DD7 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SHISA4Q96DD7 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.94□□□□□ -1.94
SHISA4Q96DD7 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.94□□□□□ -1.94
SHISA4Q96DD7 SNORD58C-201ENST00000365223 64 ntBASIC2.94□□□□□ -1.94
SHISA4Q96DD7 RNU6-147P-201ENST00000383983 107 ntBASIC2.94□□□□□ -1.94
SHISA4Q96DD7 MRPS36P2-201ENST00000512569 299 ntBASIC2.94□□□□□ -1.94
SHISA4Q96DD7 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.94□□□□□ -1.94
SHISA4Q96DD7 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.94□□□□□ -1.94
SHISA4Q96DD7 AC093010.3-201ENST00000570269 15214 ntBASIC2.93□□□□□ -1.94
SHISA4Q96DD7 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
SHISA4Q96DD7 Y_RNA.91-201ENST00000363042 107 ntBASIC2.93□□□□□ -1.94
SHISA4Q96DD7 RNU1-22P-201ENST00000363334 158 ntBASIC2.93□□□□□ -1.94
SHISA4Q96DD7 Y_RNA.346-201ENST00000365385 112 ntBASIC2.93□□□□□ -1.94
SHISA4Q96DD7 Y_RNA.617-201ENST00000410920 90 ntBASIC2.93□□□□□ -1.94
SHISA4Q96DD7 Y_RNA.630-201ENST00000411370 108 ntBASIC2.93□□□□□ -1.94
SHISA4Q96DD7 AC245102.2-201ENST00000448956 180 ntBASIC2.93□□□□□ -1.94
SHISA4Q96DD7 RNU7-172P-201ENST00000517125 64 ntBASIC2.93□□□□□ -1.94
SHISA4Q96DD7 NDUFA5P6-201ENST00000542110 379 ntBASIC2.93□□□□□ -1.94
SHISA4Q96DD7 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.93□□□□□ -1.94
SHISA4Q96DD7 MIR4438-201ENST00000585271 93 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms