Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 RNY4P18-201ENST00000391107 89 ntBASIC3.43□□□□□ -1.86
VTI1AQ96AJ9 Y_RNA.630-201ENST00000411370 108 ntBASIC3.43□□□□□ -1.86
VTI1AQ96AJ9 MRPS17P9-201ENST00000511924 393 ntBASIC3.43□□□□□ -1.86
VTI1AQ96AJ9 Y_RNA.690-201ENST00000516603 95 ntBASIC3.43□□□□□ -1.86
VTI1AQ96AJ9 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.43□□□□□ -1.86
VTI1AQ96AJ9 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.43□□□□□ -1.86
VTI1AQ96AJ9 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.43□□□□□ -1.86
VTI1AQ96AJ9 U4atac.1-201ENST00000618345 95 ntBASIC3.43□□□□□ -1.86
VTI1AQ96AJ9 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.43□□□□□ -1.86
VTI1AQ96AJ9 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.42□□□□□ -1.86
VTI1AQ96AJ9 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
VTI1AQ96AJ9 Y_RNA.52-201ENST00000362760 96 ntBASIC3.42□□□□□ -1.86
VTI1AQ96AJ9 RNU6-309P-201ENST00000364573 106 ntBASIC3.42□□□□□ -1.86
VTI1AQ96AJ9 SNORA25B-201ENST00000365507 128 ntBASIC3.42□□□□□ -1.86
VTI1AQ96AJ9 SNORA54-201ENST00000384281 123 ntBASIC3.42□□□□□ -1.86
VTI1AQ96AJ9 SNORA12.1-201ENST00000390873 148 ntBASIC3.42□□□□□ -1.86
VTI1AQ96AJ9 AL603914.1-201ENST00000401964 204 ntBASIC3.42□□□□□ -1.86
VTI1AQ96AJ9 AL353689.1-201ENST00000438895 199 ntBASIC3.42□□□□□ -1.86
VTI1AQ96AJ9 AC104389.3-201ENST00000445629 235 ntBASIC3.42□□□□□ -1.86
VTI1AQ96AJ9 HMGN1P7-201ENST00000491722 313 ntBASIC3.42□□□□□ -1.86
VTI1AQ96AJ9 AL365205.2-201ENST00000594586 68 ntBASIC3.42□□□□□ -1.86
VTI1AQ96AJ9 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
VTI1AQ96AJ9 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.41□□□□□ -1.86
VTI1AQ96AJ9 MIR148B-201ENST00000362252 99 ntBASIC3.41□□□□□ -1.86
VTI1AQ96AJ9 SNORD72-201ENST00000390994 80 ntBASIC3.41□□□□□ -1.86
VTI1AQ96AJ9 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC3.41□□□□□ -1.86
VTI1AQ96AJ9 EDDM3CP-201ENST00000415977 425 ntBASIC3.41□□□□□ -1.86
VTI1AQ96AJ9 SNRPGP10-201ENST00000432323 225 ntBASIC3.41□□□□□ -1.86
VTI1AQ96AJ9 RPS15AP28-201ENST00000435088 386 ntBASIC3.41□□□□□ -1.86
VTI1AQ96AJ9 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.41□□□□□ -1.86
VTI1AQ96AJ9 RNU6-365P-201ENST00000517113 106 ntBASIC3.41□□□□□ -1.86
VTI1AQ96AJ9 MTND5P34-201ENST00000568888 325 ntBASIC3.41□□□□□ -1.86
VTI1AQ96AJ9 AL359075.3-201ENST00000613288 217 ntBASIC3.41□□□□□ -1.86
VTI1AQ96AJ9 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.41□□□□□ -1.86
VTI1AQ96AJ9 MIR6079-201ENST00000635807 62 ntBASIC3.41□□□□□ -1.86
VTI1AQ96AJ9 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
VTI1AQ96AJ9 SNORA1-201ENST00000384107 130 ntBASIC3.4□□□□□ -1.87
VTI1AQ96AJ9 MIR624-201ENST00000385217 97 ntBASIC3.4□□□□□ -1.87
VTI1AQ96AJ9 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.4□□□□□ -1.87
VTI1AQ96AJ9 SNORA18.4-201ENST00000516440 124 ntBASIC3.4□□□□□ -1.87
VTI1AQ96AJ9 RNU6-126P-201ENST00000516685 103 ntBASIC3.4□□□□□ -1.87
VTI1AQ96AJ9 AL353149.1-201ENST00000610667 244 ntBASIC3.4□□□□□ -1.87
VTI1AQ96AJ9 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
VTI1AQ96AJ9 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
VTI1AQ96AJ9 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.4□□□□□ -1.87
VTI1AQ96AJ9 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
VTI1AQ96AJ9 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
VTI1AQ96AJ9 Y_RNA.267-201ENST00000364679 109 ntBASIC3.39□□□□□ -1.87
VTI1AQ96AJ9 SNORA46-201ENST00000384762 135 ntBASIC3.39□□□□□ -1.87
VTI1AQ96AJ9 RPL21P3-201ENST00000395517 478 ntBASIC3.39□□□□□ -1.87
VTI1AQ96AJ9 MIR891A-201ENST00000401237 79 ntBASIC3.39□□□□□ -1.87
VTI1AQ96AJ9 AL117342.1-201ENST00000404861 406 ntBASIC3.39□□□□□ -1.87
VTI1AQ96AJ9 RNA5SP127-201ENST00000411051 133 ntBASIC3.39□□□□□ -1.87
VTI1AQ96AJ9 SRIP3-201ENST00000413200 219 ntBASIC3.39□□□□□ -1.87
VTI1AQ96AJ9 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.39□□□□□ -1.87
VTI1AQ96AJ9 UQCRHP3-201ENST00000451503 251 ntBASIC3.39□□□□□ -1.87
VTI1AQ96AJ9 PDCD5P2-201ENST00000507570 312 ntBASIC3.39□□□□□ -1.87
VTI1AQ96AJ9 SNORD33.1-201ENST00000516213 88 ntBASIC3.39□□□□□ -1.87
VTI1AQ96AJ9 RNU6-341P-201ENST00000516973 96 ntBASIC3.39□□□□□ -1.87
VTI1AQ96AJ9 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.39□□□□□ -1.87
VTI1AQ96AJ9 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.38□□□□□ -1.87
VTI1AQ96AJ9 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
VTI1AQ96AJ9 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
VTI1AQ96AJ9 SNORD18B-201ENST00000365659 72 ntBASIC3.38□□□□□ -1.87
VTI1AQ96AJ9 MIR1262-201ENST00000408276 93 ntBASIC3.38□□□□□ -1.87
VTI1AQ96AJ9 RNA5SP274-201ENST00000410484 108 ntBASIC3.38□□□□□ -1.87
VTI1AQ96AJ9 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.38□□□□□ -1.87
VTI1AQ96AJ9 AL139132.1-201ENST00000431587 344 ntBASIC3.38□□□□□ -1.87
VTI1AQ96AJ9 AC018634.1-201ENST00000437554 401 ntBASIC3.38□□□□□ -1.87
VTI1AQ96AJ9 AL135938.1-201ENST00000443141 297 ntBASIC3.38□□□□□ -1.87
VTI1AQ96AJ9 RNU5E-3P-201ENST00000515913 68 ntBASIC3.38□□□□□ -1.87
VTI1AQ96AJ9 RN7SKP43-201ENST00000516173 320 ntBASIC3.38□□□□□ -1.87
VTI1AQ96AJ9 RNU6-1061P-201ENST00000516530 99 ntBASIC3.38□□□□□ -1.87
VTI1AQ96AJ9 RNU1-104P-201ENST00000517280 175 ntBASIC3.38□□□□□ -1.87
VTI1AQ96AJ9 NDUFA5P6-201ENST00000542110 379 ntBASIC3.38□□□□□ -1.87
VTI1AQ96AJ9 AC133485.4-201ENST00000561835 220 ntBASIC3.38□□□□□ -1.87
VTI1AQ96AJ9 AC138907.4-201ENST00000570107 226 ntBASIC3.38□□□□□ -1.87
VTI1AQ96AJ9 MIR4319-201ENST00000577285 85 ntBASIC3.38□□□□□ -1.87
VTI1AQ96AJ9 MIR3129-201ENST00000581095 76 ntBASIC3.38□□□□□ -1.87
VTI1AQ96AJ9 MIR3162-201ENST00000581818 82 ntBASIC3.38□□□□□ -1.87
VTI1AQ96AJ9 AC008507.4-201ENST00000585464 127 ntBASIC3.38□□□□□ -1.87
VTI1AQ96AJ9 AC108081.1-201ENST00000604358 221 ntBASIC3.38□□□□□ -1.87
VTI1AQ96AJ9 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.38□□□□□ -1.87
VTI1AQ96AJ9 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
VTI1AQ96AJ9 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.38□□□□□ -1.87
VTI1AQ96AJ9 AC018630.2-201ENST00000534866 2403 ntBASIC3.38□□□□□ -1.87
VTI1AQ96AJ9 Y_RNA.99-201ENST00000363138 105 ntBASIC3.37□□□□□ -1.87
VTI1AQ96AJ9 RNU1-109P-201ENST00000383960 147 ntBASIC3.37□□□□□ -1.87
VTI1AQ96AJ9 Y_RNA.617-201ENST00000410920 90 ntBASIC3.37□□□□□ -1.87
VTI1AQ96AJ9 RNA5SP184-201ENST00000411071 108 ntBASIC3.37□□□□□ -1.87
VTI1AQ96AJ9 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.37□□□□□ -1.87
VTI1AQ96AJ9 AC105272.1-201ENST00000438604 198 ntBASIC3.37□□□□□ -1.87
VTI1AQ96AJ9 YWHAEP4-201ENST00000505390 198 ntBASIC3.37□□□□□ -1.87
VTI1AQ96AJ9 RN7SKP132-201ENST00000516001 208 ntBASIC3.37□□□□□ -1.87
VTI1AQ96AJ9 Y_RNA.709-201ENST00000516952 92 ntBASIC3.37□□□□□ -1.87
VTI1AQ96AJ9 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.37□□□□□ -1.87
VTI1AQ96AJ9 U6.95-201ENST00000636931 70 ntBASIC3.37□□□□□ -1.87
VTI1AQ96AJ9 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
VTI1AQ96AJ9 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
VTI1AQ96AJ9 ZNF271P-202ENST00000465539 1970 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms