Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
TRIM41Q8WV44 RNU1-105P-201ENST00000363470 161 ntBASIC5.18□□□□□ -1.58
TRIM41Q8WV44 RNU6-743P-201ENST00000364151 106 ntBASIC5.18□□□□□ -1.58
TRIM41Q8WV44 MIR518E-201ENST00000385252 88 ntBASIC5.18□□□□□ -1.58
TRIM41Q8WV44 RPS12P18-201ENST00000442381 270 ntBASIC5.18□□□□□ -1.58
TRIM41Q8WV44 SNORD109B-201ENST00000458961 67 ntBASIC5.18□□□□□ -1.58
TRIM41Q8WV44 SNORD109A-201ENST00000459128 67 ntBASIC5.18□□□□□ -1.58
TRIM41Q8WV44 RNU6-240P-201ENST00000516098 97 ntBASIC5.18□□□□□ -1.58
TRIM41Q8WV44 RNU6-693P-201ENST00000516134 107 ntBASIC5.18□□□□□ -1.58
TRIM41Q8WV44 Y_RNA.666-201ENST00000516187 112 ntBASIC5.18□□□□□ -1.58
TRIM41Q8WV44 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM41Q8WV44 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM41Q8WV44 AC073325.2-201ENST00000339545 159 ntBASIC5.17□□□□□ -1.58
TRIM41Q8WV44 MIR181B1-201ENST00000385240 110 ntBASIC5.17□□□□□ -1.58
TRIM41Q8WV44 SNRPGP10-201ENST00000432323 225 ntBASIC5.17□□□□□ -1.58
TRIM41Q8WV44 HMGN2P18-201ENST00000450680 270 ntBASIC5.17□□□□□ -1.58
TRIM41Q8WV44 SCARNA17.1-201ENST00000516211 143 ntBASIC5.17□□□□□ -1.58
TRIM41Q8WV44 SCARNA17.2-201ENST00000516334 143 ntBASIC5.17□□□□□ -1.58
TRIM41Q8WV44 RNU6-109P-201ENST00000516364 107 ntBASIC5.17□□□□□ -1.58
TRIM41Q8WV44 RNU6-184P-201ENST00000516514 107 ntBASIC5.17□□□□□ -1.58
TRIM41Q8WV44 RNA5SP490-201ENST00000517141 136 ntBASIC5.17□□□□□ -1.58
TRIM41Q8WV44 AC073413.2-201ENST00000604332 360 ntBASIC5.17□□□□□ -1.58
TRIM41Q8WV44 SCARNA17.4-201ENST00000614296 143 ntBASIC5.17□□□□□ -1.58
TRIM41Q8WV44 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TRIM41Q8WV44 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
TRIM41Q8WV44 MIR22-201ENST00000362190 85 ntBASIC5.16□□□□□ -1.58
TRIM41Q8WV44 AL117342.1-201ENST00000404861 406 ntBASIC5.16□□□□□ -1.58
TRIM41Q8WV44 RNU6-1186P-201ENST00000410429 97 ntBASIC5.16□□□□□ -1.58
TRIM41Q8WV44 snoU13.18-201ENST00000459483 104 ntBASIC5.16□□□□□ -1.58
TRIM41Q8WV44 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC5.16□□□□□ -1.58
TRIM41Q8WV44 TP73-AS1.1-201ENST00000611447 161 ntBASIC5.16□□□□□ -1.58
TRIM41Q8WV44 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC5.16□□□□□ -1.58
TRIM41Q8WV44 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
TRIM41Q8WV44 RNU6-486P-201ENST00000363116 107 ntBASIC5.15□□□□□ -1.59
TRIM41Q8WV44 RNU6-414P-201ENST00000363705 104 ntBASIC5.15□□□□□ -1.59
TRIM41Q8WV44 MIR488-201ENST00000365739 83 ntBASIC5.15□□□□□ -1.59
TRIM41Q8WV44 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC5.15□□□□□ -1.59
TRIM41Q8WV44 HMGN1P7-201ENST00000491722 313 ntBASIC5.15□□□□□ -1.59
TRIM41Q8WV44 RNU2-34P-201ENST00000516534 121 ntBASIC5.15□□□□□ -1.59
TRIM41Q8WV44 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
TRIM41Q8WV44 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
TRIM41Q8WV44 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC5.15□□□□□ -1.59
TRIM41Q8WV44 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
TRIM41Q8WV44 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM41Q8WV44 RNA5SP173-201ENST00000364857 136 ntBASIC5.14□□□□□ -1.59
TRIM41Q8WV44 SNORA67.4-201ENST00000384688 142 ntBASIC5.14□□□□□ -1.59
TRIM41Q8WV44 MIR520G-201ENST00000385064 90 ntBASIC5.14□□□□□ -1.59
TRIM41Q8WV44 RN7SKP192-201ENST00000411291 327 ntBASIC5.14□□□□□ -1.59
TRIM41Q8WV44 HMGN2P34-201ENST00000437647 269 ntBASIC5.14□□□□□ -1.59
TRIM41Q8WV44 HMGN2P23-201ENST00000456759 269 ntBASIC5.14□□□□□ -1.59
TRIM41Q8WV44 AC062037.1-201ENST00000605302 128 ntBASIC5.14□□□□□ -1.59
TRIM41Q8WV44 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
TRIM41Q8WV44 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM41Q8WV44 GABRG2-229ENST00000641017 3628 ntBASIC5.13□□□□□ -1.59
TRIM41Q8WV44 RNU6-888P-201ENST00000363010 101 ntBASIC5.13□□□□□ -1.59
TRIM41Q8WV44 Y_RNA.323-201ENST00000365157 109 ntBASIC5.13□□□□□ -1.59
TRIM41Q8WV44 RNY1P7-201ENST00000384743 110 ntBASIC5.13□□□□□ -1.59
TRIM41Q8WV44 SNORD77.3-201ENST00000391113 65 ntBASIC5.13□□□□□ -1.59
TRIM41Q8WV44 AP003327.1-201ENST00000529684 127 ntBASIC5.13□□□□□ -1.59
TRIM41Q8WV44 AC090115.4-201ENST00000609970 188 ntBASIC5.13□□□□□ -1.59
TRIM41Q8WV44 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC5.13□□□□□ -1.59
TRIM41Q8WV44 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM41Q8WV44 MIR1248-201ENST00000629190 106 ntBASIC5.13□□□□□ -1.59
TRIM41Q8WV44 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC5.13□□□□□ -1.59
TRIM41Q8WV44 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM41Q8WV44 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
TRIM41Q8WV44 Y_RNA.220-201ENST00000364244 109 ntBASIC5.12□□□□□ -1.59
TRIM41Q8WV44 MIR590-201ENST00000385008 97 ntBASIC5.12□□□□□ -1.59
TRIM41Q8WV44 MIR759-201ENST00000390224 91 ntBASIC5.12□□□□□ -1.59
TRIM41Q8WV44 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
TRIM41Q8WV44 RNU6ATAC37P-201ENST00000408328 131 ntBASIC5.12□□□□□ -1.59
TRIM41Q8WV44 Z98742.3-201ENST00000418637 326 ntBASIC5.12□□□□□ -1.59
TRIM41Q8WV44 AC006539.3-201ENST00000454258 129 ntBASIC5.12□□□□□ -1.59
TRIM41Q8WV44 RN7SL20P-201ENST00000488827 297 ntBASIC5.12□□□□□ -1.59
TRIM41Q8WV44 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC5.12□□□□□ -1.59
TRIM41Q8WV44 SNORA4.4-201ENST00000515921 135 ntBASIC5.12□□□□□ -1.59
TRIM41Q8WV44 RNA5SP217-201ENST00000515959 91 ntBASIC5.12□□□□□ -1.59
TRIM41Q8WV44 RNU6-1291P-201ENST00000516591 104 ntBASIC5.12□□□□□ -1.59
TRIM41Q8WV44 AC068657.1-201ENST00000520807 306 ntBASIC5.12□□□□□ -1.59
TRIM41Q8WV44 MIR4498-201ENST00000577599 66 ntBASIC5.12□□□□□ -1.59
TRIM41Q8WV44 RNU6-94P-201ENST00000607728 107 ntBASIC5.12□□□□□ -1.59
TRIM41Q8WV44 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
TRIM41Q8WV44 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC5.12□□□□□ -1.59
TRIM41Q8WV44 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM41Q8WV44 SNORD56.3-201ENST00000363507 71 ntBASIC5.11□□□□□ -1.59
TRIM41Q8WV44 Y_RNA.213-201ENST00000364178 111 ntBASIC5.11□□□□□ -1.59
TRIM41Q8WV44 Y_RNA.362-201ENST00000365518 110 ntBASIC5.11□□□□□ -1.59
TRIM41Q8WV44 SNORD24-201ENST00000383884 75 ntBASIC5.11□□□□□ -1.59
TRIM41Q8WV44 RPS3AP1-201ENST00000413190 320 ntBASIC5.11□□□□□ -1.59
TRIM41Q8WV44 RN7SL442P-201ENST00000473804 320 ntBASIC5.11□□□□□ -1.59
TRIM41Q8WV44 SNORA64.4-201ENST00000516632 81 ntBASIC5.11□□□□□ -1.59
TRIM41Q8WV44 AC141557.1-201ENST00000540982 400 ntBASIC5.11□□□□□ -1.59
TRIM41Q8WV44 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC5.11□□□□□ -1.59
TRIM41Q8WV44 ICE2P2-201ENST00000483823 2787 ntBASIC5.11□□□□□ -1.59
TRIM41Q8WV44 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
TRIM41Q8WV44 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
TRIM41Q8WV44 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM41Q8WV44 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC5.11□□□□□ -1.59
TRIM41Q8WV44 RNY4P6-201ENST00000363667 96 ntBASIC5.1□□□□□ -1.59
TRIM41Q8WV44 Y_RNA.198-201ENST00000364013 98 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms