Protein–RNA interactions for Protein: Q86VH5

LRRTM3, Leucine-rich repeat transmembrane neuronal protein 3, humanhuman

Predictions only

Length 581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM3Q86VH5 MIR520A-201ENST00000384862 85 ntBASIC2.48□□□□□ -2.01
LRRTM3Q86VH5 MIR144-201ENST00000384886 86 ntBASIC2.48□□□□□ -2.01
LRRTM3Q86VH5 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
LRRTM3Q86VH5 Y_RNA.793-201ENST00000411222 111 ntBASIC2.48□□□□□ -2.01
LRRTM3Q86VH5 AC245047.3-201ENST00000429428 127 ntBASIC2.48□□□□□ -2.01
LRRTM3Q86VH5 MTND5P15-201ENST00000434246 349 ntBASIC2.48□□□□□ -2.01
LRRTM3Q86VH5 Y_RNA.644-201ENST00000459006 113 ntBASIC2.48□□□□□ -2.01
LRRTM3Q86VH5 Y_RNA.674-201ENST00000516362 113 ntBASIC2.48□□□□□ -2.01
LRRTM3Q86VH5 RNU2-56P-201ENST00000516826 190 ntBASIC2.48□□□□□ -2.01
LRRTM3Q86VH5 SUB1P4-201ENST00000566062 339 ntBASIC2.48□□□□□ -2.01
LRRTM3Q86VH5 MIR2681-201ENST00000581814 105 ntBASIC2.48□□□□□ -2.01
LRRTM3Q86VH5 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.48□□□□□ -2.01
LRRTM3Q86VH5 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.48□□□□□ -2.01
LRRTM3Q86VH5 RNU6-1020P-201ENST00000363684 107 ntBASIC2.47□□□□□ -2.01
LRRTM3Q86VH5 Y_RNA.203-201ENST00000364106 102 ntBASIC2.47□□□□□ -2.01
LRRTM3Q86VH5 RNU6-923P-201ENST00000364753 107 ntBASIC2.47□□□□□ -2.01
LRRTM3Q86VH5 SNORA70B-201ENST00000384210 135 ntBASIC2.47□□□□□ -2.01
LRRTM3Q86VH5 MIR626-201ENST00000385032 94 ntBASIC2.47□□□□□ -2.01
LRRTM3Q86VH5 RNU6-907P-201ENST00000390924 102 ntBASIC2.47□□□□□ -2.01
LRRTM3Q86VH5 RNU2-7P-201ENST00000410794 178 ntBASIC2.47□□□□□ -2.01
LRRTM3Q86VH5 RNU6-182P-201ENST00000516970 105 ntBASIC2.47□□□□□ -2.01
LRRTM3Q86VH5 SNORA81.3-201ENST00000517283 198 ntBASIC2.47□□□□□ -2.01
LRRTM3Q86VH5 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.47□□□□□ -2.01
LRRTM3Q86VH5 MIR5694-201ENST00000581190 76 ntBASIC2.47□□□□□ -2.01
LRRTM3Q86VH5 AL929325.1-201ENST00000603096 117 ntBASIC2.47□□□□□ -2.01
LRRTM3Q86VH5 AC022217.4-201ENST00000604389 163 ntBASIC2.47□□□□□ -2.01
LRRTM3Q86VH5 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.47□□□□□ -2.01
LRRTM3Q86VH5 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
LRRTM3Q86VH5 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.47□□□□□ -2.01
LRRTM3Q86VH5 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.01
LRRTM3Q86VH5 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
LRRTM3Q86VH5 SNORA63D-201ENST00000364359 132 ntBASIC2.46□□□□□ -2.02
LRRTM3Q86VH5 RNU4-10P-201ENST00000364383 140 ntBASIC2.46□□□□□ -2.02
LRRTM3Q86VH5 RNU6-950P-201ENST00000384651 107 ntBASIC2.46□□□□□ -2.02
LRRTM3Q86VH5 RNA5SP109-201ENST00000391010 116 ntBASIC2.46□□□□□ -2.02
LRRTM3Q86VH5 RNU6-493P-201ENST00000391321 108 ntBASIC2.46□□□□□ -2.02
LRRTM3Q86VH5 RN7SKP223-201ENST00000410582 62 ntBASIC2.46□□□□□ -2.02
LRRTM3Q86VH5 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.46□□□□□ -2.02
LRRTM3Q86VH5 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.46□□□□□ -2.02
LRRTM3Q86VH5 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.46□□□□□ -2.02
LRRTM3Q86VH5 RNY3P16-201ENST00000516338 101 ntBASIC2.46□□□□□ -2.02
LRRTM3Q86VH5 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
LRRTM3Q86VH5 MIR5007-201ENST00000583098 95 ntBASIC2.46□□□□□ -2.02
LRRTM3Q86VH5 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.46□□□□□ -2.02
LRRTM3Q86VH5 MIR6840-201ENST00000611937 71 ntBASIC2.46□□□□□ -2.02
LRRTM3Q86VH5 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
LRRTM3Q86VH5 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
LRRTM3Q86VH5 AC068700.1-201ENST00000565862 3754 ntBASIC2.45□□□□□ -2.02
LRRTM3Q86VH5 AC008555.8-201ENST00000623602 2168 ntBASIC2.45□□□□□ -2.02
LRRTM3Q86VH5 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.45□□□□□ -2.02
LRRTM3Q86VH5 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
LRRTM3Q86VH5 MIR6073-201ENST00000352083 89 ntBASIC2.45□□□□□ -2.02
LRRTM3Q86VH5 Y_RNA.24-201ENST00000362508 103 ntBASIC2.45□□□□□ -2.02
LRRTM3Q86VH5 RNU4-41P-201ENST00000364426 143 ntBASIC2.45□□□□□ -2.02
LRRTM3Q86VH5 AL512604.1-201ENST00000404812 257 ntBASIC2.45□□□□□ -2.02
LRRTM3Q86VH5 RNU6-383P-201ENST00000410864 94 ntBASIC2.45□□□□□ -2.02
LRRTM3Q86VH5 RPS12P2-201ENST00000439728 269 ntBASIC2.45□□□□□ -2.02
LRRTM3Q86VH5 RPS27P1-201ENST00000450552 247 ntBASIC2.45□□□□□ -2.02
LRRTM3Q86VH5 AL049830.1-201ENST00000468034 425 ntBASIC2.45□□□□□ -2.02
LRRTM3Q86VH5 CBX3P4-201ENST00000538909 354 ntBASIC2.45□□□□□ -2.02
LRRTM3Q86VH5 JPX_2.1-201ENST00000614161 69 ntBASIC2.45□□□□□ -2.02
LRRTM3Q86VH5 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
LRRTM3Q86VH5 SNORA1B-201ENST00000362535 133 ntBASIC2.44□□□□□ -2.02
LRRTM3Q86VH5 U8.2-201ENST00000363156 134 ntBASIC2.44□□□□□ -2.02
LRRTM3Q86VH5 RNU6-112P-201ENST00000363599 104 ntBASIC2.44□□□□□ -2.02
LRRTM3Q86VH5 RNU6-969P-201ENST00000383900 105 ntBASIC2.44□□□□□ -2.02
LRRTM3Q86VH5 RNU6-1080P-201ENST00000383982 107 ntBASIC2.44□□□□□ -2.02
LRRTM3Q86VH5 MIR1261-201ENST00000408659 82 ntBASIC2.44□□□□□ -2.02
LRRTM3Q86VH5 AL606517.2-201ENST00000442855 241 ntBASIC2.44□□□□□ -2.02
LRRTM3Q86VH5 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.44□□□□□ -2.02
LRRTM3Q86VH5 RNA5SP496-201ENST00000391240 109 ntBASIC2.43□□□□□ -2.02
LRRTM3Q86VH5 RNA5SP425-201ENST00000410336 112 ntBASIC2.43□□□□□ -2.02
LRRTM3Q86VH5 COX6CP10-201ENST00000416832 224 ntBASIC2.43□□□□□ -2.02
LRRTM3Q86VH5 Z98949.2-201ENST00000440996 144 ntBASIC2.43□□□□□ -2.02
LRRTM3Q86VH5 RN7SKP164-201ENST00000516138 266 ntBASIC2.43□□□□□ -2.02
LRRTM3Q86VH5 RNU7-28P-201ENST00000516759 62 ntBASIC2.43□□□□□ -2.02
LRRTM3Q86VH5 AP002392.1-201ENST00000537692 208 ntBASIC2.43□□□□□ -2.02
LRRTM3Q86VH5 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.43□□□□□ -2.02
LRRTM3Q86VH5 MIR8054-201ENST00000620877 86 ntBASIC2.43□□□□□ -2.02
LRRTM3Q86VH5 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.43□□□□□ -2.02
LRRTM3Q86VH5 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
LRRTM3Q86VH5 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
LRRTM3Q86VH5 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
LRRTM3Q86VH5 Y_RNA.7-201ENST00000362352 102 ntBASIC2.42□□□□□ -2.02
LRRTM3Q86VH5 SNORA80E-201ENST00000384744 137 ntBASIC2.42□□□□□ -2.02
LRRTM3Q86VH5 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.42□□□□□ -2.02
LRRTM3Q86VH5 AC023449.1-201ENST00000454464 154 ntBASIC2.42□□□□□ -2.02
LRRTM3Q86VH5 HMGN1P7-201ENST00000491722 313 ntBASIC2.42□□□□□ -2.02
LRRTM3Q86VH5 RNA5SP481-201ENST00000516814 122 ntBASIC2.42□□□□□ -2.02
LRRTM3Q86VH5 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
LRRTM3Q86VH5 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
LRRTM3Q86VH5 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
LRRTM3Q86VH5 ZNF702P-202ENST00000434269 1966 ntBASIC2.41□□□□□ -2.02
LRRTM3Q86VH5 Y_RNA.265-201ENST00000364677 108 ntBASIC2.41□□□□□ -2.02
LRRTM3Q86VH5 DEFA7P-201ENST00000382676 285 ntBASIC2.41□□□□□ -2.02
LRRTM3Q86VH5 RNU6-296P-201ENST00000384608 107 ntBASIC2.41□□□□□ -2.02
LRRTM3Q86VH5 RNU6-440P-201ENST00000390882 105 ntBASIC2.41□□□□□ -2.02
LRRTM3Q86VH5 RNU6-918P-201ENST00000391219 106 ntBASIC2.41□□□□□ -2.02
LRRTM3Q86VH5 RNU6-381P-201ENST00000391259 108 ntBASIC2.41□□□□□ -2.02
LRRTM3Q86VH5 RN7SKP200-201ENST00000410564 320 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 202.7 ms