Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 RNU6-461P-201ENST00000364195 107 ntBASIC2.88□□□□□ -1.95
UBE3DQ7Z6J8 Y_RNA.267-201ENST00000364679 109 ntBASIC2.88□□□□□ -1.95
UBE3DQ7Z6J8 MIR548A2-201ENST00000384956 97 ntBASIC2.88□□□□□ -1.95
UBE3DQ7Z6J8 MIR522-201ENST00000385071 87 ntBASIC2.88□□□□□ -1.95
UBE3DQ7Z6J8 RPL21P3-201ENST00000395517 478 ntBASIC2.88□□□□□ -1.95
UBE3DQ7Z6J8 AL117342.1-201ENST00000404861 406 ntBASIC2.88□□□□□ -1.95
UBE3DQ7Z6J8 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.88□□□□□ -1.95
UBE3DQ7Z6J8 RN7SL75P-201ENST00000461926 281 ntBASIC2.88□□□□□ -1.95
UBE3DQ7Z6J8 AL049830.1-201ENST00000468034 425 ntBASIC2.88□□□□□ -1.95
UBE3DQ7Z6J8 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.88□□□□□ -1.95
UBE3DQ7Z6J8 RNU6-693P-201ENST00000516134 107 ntBASIC2.88□□□□□ -1.95
UBE3DQ7Z6J8 RNU6-1270P-201ENST00000517128 108 ntBASIC2.88□□□□□ -1.95
UBE3DQ7Z6J8 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.88□□□□□ -1.95
UBE3DQ7Z6J8 MIR5197-201ENST00000583721 112 ntBASIC2.88□□□□□ -1.95
UBE3DQ7Z6J8 MIR8057-201ENST00000620957 69 ntBASIC2.88□□□□□ -1.95
UBE3DQ7Z6J8 AL035425.3-201ENST00000564206 4996 ntBASIC2.88□□□□□ -1.95
UBE3DQ7Z6J8 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.87□□□□□ -1.95
UBE3DQ7Z6J8 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
UBE3DQ7Z6J8 AC093831.2-201ENST00000624393 3427 ntBASIC2.87□□□□□ -1.95
UBE3DQ7Z6J8 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.87□□□□□ -1.95
UBE3DQ7Z6J8 AC008264.2-201ENST00000610193 3731 ntBASIC2.87□□□□□ -1.95
UBE3DQ7Z6J8 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.87□□□□□ -1.95
UBE3DQ7Z6J8 SNORA8-201ENST00000384574 139 ntBASIC2.87□□□□□ -1.95
UBE3DQ7Z6J8 MIR802-201ENST00000390235 94 ntBASIC2.87□□□□□ -1.95
UBE3DQ7Z6J8 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.87□□□□□ -1.95
UBE3DQ7Z6J8 AC007064.1-201ENST00000412238 351 ntBASIC2.87□□□□□ -1.95
UBE3DQ7Z6J8 UQCRHP3-201ENST00000451503 251 ntBASIC2.87□□□□□ -1.95
UBE3DQ7Z6J8 AC096725.1-201ENST00000514266 313 ntBASIC2.87□□□□□ -1.95
UBE3DQ7Z6J8 Y_RNA.666-201ENST00000516187 112 ntBASIC2.87□□□□□ -1.95
UBE3DQ7Z6J8 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.87□□□□□ -1.95
UBE3DQ7Z6J8 AC006441.5-201ENST00000612680 209 ntBASIC2.87□□□□□ -1.95
UBE3DQ7Z6J8 AC134878.1-201ENST00000619901 243 ntBASIC2.87□□□□□ -1.95
UBE3DQ7Z6J8 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
UBE3DQ7Z6J8 SNORA1B-201ENST00000362535 133 ntBASIC2.86□□□□□ -1.95
UBE3DQ7Z6J8 RNU6-508P-201ENST00000363231 103 ntBASIC2.86□□□□□ -1.95
UBE3DQ7Z6J8 Y_RNA.281-201ENST00000364774 94 ntBASIC2.86□□□□□ -1.95
UBE3DQ7Z6J8 RNU6-442P-201ENST00000383968 104 ntBASIC2.86□□□□□ -1.95
UBE3DQ7Z6J8 MIR570-201ENST00000384917 97 ntBASIC2.86□□□□□ -1.95
UBE3DQ7Z6J8 SNORD77.3-201ENST00000391113 65 ntBASIC2.86□□□□□ -1.95
UBE3DQ7Z6J8 RN7SKP123-201ENST00000410732 291 ntBASIC2.86□□□□□ -1.95
UBE3DQ7Z6J8 AC099677.2-201ENST00000436385 175 ntBASIC2.86□□□□□ -1.95
UBE3DQ7Z6J8 AC009238.1-201ENST00000442165 424 ntBASIC2.86□□□□□ -1.95
UBE3DQ7Z6J8 AC009237.6-201ENST00000446969 424 ntBASIC2.86□□□□□ -1.95
UBE3DQ7Z6J8 COX6CP6-201ENST00000490840 228 ntBASIC2.86□□□□□ -1.95
UBE3DQ7Z6J8 Y_RNA.694-201ENST00000516677 117 ntBASIC2.86□□□□□ -1.95
UBE3DQ7Z6J8 RNU6-1149P-201ENST00000516810 97 ntBASIC2.86□□□□□ -1.95
UBE3DQ7Z6J8 SCARNA15-202ENST00000516881 127 ntBASIC2.86□□□□□ -1.95
UBE3DQ7Z6J8 RN7SKP57-201ENST00000517248 293 ntBASIC2.86□□□□□ -1.95
UBE3DQ7Z6J8 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.86□□□□□ -1.95
UBE3DQ7Z6J8 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
UBE3DQ7Z6J8 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
UBE3DQ7Z6J8 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
UBE3DQ7Z6J8 AC073346.2-201ENST00000624724 2058 ntBASIC2.85□□□□□ -1.95
UBE3DQ7Z6J8 SNORA70.4-201ENST00000365509 134 ntBASIC2.85□□□□□ -1.95
UBE3DQ7Z6J8 MIR518F-201ENST00000384973 87 ntBASIC2.85□□□□□ -1.95
UBE3DQ7Z6J8 RPS26P48-201ENST00000491713 339 ntBASIC2.85□□□□□ -1.95
UBE3DQ7Z6J8 AC091826.1-201ENST00000514065 313 ntBASIC2.85□□□□□ -1.95
UBE3DQ7Z6J8 RNU7-28P-201ENST00000516759 62 ntBASIC2.85□□□□□ -1.95
UBE3DQ7Z6J8 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.85□□□□□ -1.95
UBE3DQ7Z6J8 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.85□□□□□ -1.95
UBE3DQ7Z6J8 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
UBE3DQ7Z6J8 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
UBE3DQ7Z6J8 RNA5SP125-201ENST00000364843 120 ntBASIC2.84□□□□□ -1.95
UBE3DQ7Z6J8 RNU6-32P-201ENST00000383948 107 ntBASIC2.84□□□□□ -1.95
UBE3DQ7Z6J8 RNU6-13P-201ENST00000384248 107 ntBASIC2.84□□□□□ -1.95
UBE3DQ7Z6J8 RNU6-12P-201ENST00000384604 107 ntBASIC2.84□□□□□ -1.95
UBE3DQ7Z6J8 RNU6-41P-201ENST00000384741 107 ntBASIC2.84□□□□□ -1.95
UBE3DQ7Z6J8 RNA5SP482-201ENST00000391269 118 ntBASIC2.84□□□□□ -1.95
UBE3DQ7Z6J8 RNA5SP274-201ENST00000410484 108 ntBASIC2.84□□□□□ -1.95
UBE3DQ7Z6J8 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.84□□□□□ -1.95
UBE3DQ7Z6J8 AL031737.1-201ENST00000450125 223 ntBASIC2.84□□□□□ -1.95
UBE3DQ7Z6J8 RN7SKP43-201ENST00000516173 320 ntBASIC2.84□□□□□ -1.95
UBE3DQ7Z6J8 RNU6-168P-201ENST00000516189 101 ntBASIC2.84□□□□□ -1.95
UBE3DQ7Z6J8 IGKV1-22-201ENST00000524313 326 ntBASIC2.84□□□□□ -1.95
UBE3DQ7Z6J8 MIR5195-201ENST00000583555 115 ntBASIC2.84□□□□□ -1.95
UBE3DQ7Z6J8 CTSLP2-204ENST00000629029 392 ntBASIC2.84□□□□□ -1.95
UBE3DQ7Z6J8 AC008555.8-201ENST00000623602 2168 ntBASIC2.84□□□□□ -1.96
UBE3DQ7Z6J8 FAM35CP-201ENST00000554755 2470 ntBASIC2.83□□□□□ -1.96
UBE3DQ7Z6J8 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
UBE3DQ7Z6J8 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
UBE3DQ7Z6J8 SNORD14E-201ENST00000364009 85 ntBASIC2.83□□□□□ -1.96
UBE3DQ7Z6J8 SNORA71.1-201ENST00000364523 117 ntBASIC2.83□□□□□ -1.96
UBE3DQ7Z6J8 Y_RNA.336-201ENST00000365307 109 ntBASIC2.83□□□□□ -1.96
UBE3DQ7Z6J8 Y_RNA.528-201ENST00000384575 108 ntBASIC2.83□□□□□ -1.96
UBE3DQ7Z6J8 MIR548A1-201ENST00000385041 97 ntBASIC2.83□□□□□ -1.96
UBE3DQ7Z6J8 snoU13.22-201ENST00000459428 104 ntBASIC2.83□□□□□ -1.96
UBE3DQ7Z6J8 RN7SL633P-201ENST00000488974 297 ntBASIC2.83□□□□□ -1.96
UBE3DQ7Z6J8 AL137067.1-201ENST00000615933 120 ntBASIC2.83□□□□□ -1.96
UBE3DQ7Z6J8 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.83□□□□□ -1.96
UBE3DQ7Z6J8 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.83□□□□□ -1.96
UBE3DQ7Z6J8 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.83□□□□□ -1.96
UBE3DQ7Z6J8 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
UBE3DQ7Z6J8 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
UBE3DQ7Z6J8 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
UBE3DQ7Z6J8 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.82□□□□□ -1.96
UBE3DQ7Z6J8 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
UBE3DQ7Z6J8 AC093010.3-201ENST00000570269 15214 ntBASIC2.82□□□□□ -1.96
UBE3DQ7Z6J8 MIR422A-201ENST00000362286 90 ntBASIC2.82□□□□□ -1.96
UBE3DQ7Z6J8 SNORD114-6-201ENST00000364393 72 ntBASIC2.82□□□□□ -1.96
UBE3DQ7Z6J8 snoU2-30.1-201ENST00000365012 70 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 189.1 ms