Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 SNORA22-201ENST00000383907 134 ntBASIC2.8□□□□□ -1.96
RNF111Q6ZNA4 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.8□□□□□ -1.96
RNF111Q6ZNA4 RNU6-1270P-201ENST00000517128 108 ntBASIC2.8□□□□□ -1.96
RNF111Q6ZNA4 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.8□□□□□ -1.96
RNF111Q6ZNA4 AL365205.2-201ENST00000594586 68 ntBASIC2.8□□□□□ -1.96
RNF111Q6ZNA4 AL022345.2-201ENST00000606307 135 ntBASIC2.8□□□□□ -1.96
RNF111Q6ZNA4 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.8□□□□□ -1.96
RNF111Q6ZNA4 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.8□□□□□ -1.96
RNF111Q6ZNA4 MIR6079-201ENST00000635807 62 ntBASIC2.8□□□□□ -1.96
RNF111Q6ZNA4 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
RNF111Q6ZNA4 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
RNF111Q6ZNA4 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.8□□□□□ -1.96
RNF111Q6ZNA4 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
RNF111Q6ZNA4 RNU6-525P-201ENST00000363685 104 ntBASIC2.79□□□□□ -1.96
RNF111Q6ZNA4 RNU6-647P-201ENST00000364243 107 ntBASIC2.79□□□□□ -1.96
RNF111Q6ZNA4 SNORD114-6-201ENST00000364393 72 ntBASIC2.79□□□□□ -1.96
RNF111Q6ZNA4 SNORA25B-201ENST00000365507 128 ntBASIC2.79□□□□□ -1.96
RNF111Q6ZNA4 MIR891A-201ENST00000401237 79 ntBASIC2.79□□□□□ -1.96
RNF111Q6ZNA4 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.79□□□□□ -1.96
RNF111Q6ZNA4 RPS26P45-201ENST00000471748 340 ntBASIC2.79□□□□□ -1.96
RNF111Q6ZNA4 CYCTP-201ENST00000504253 315 ntBASIC2.79□□□□□ -1.96
RNF111Q6ZNA4 AC091826.1-201ENST00000514065 313 ntBASIC2.79□□□□□ -1.96
RNF111Q6ZNA4 RNU6-781P-201ENST00000516377 101 ntBASIC2.79□□□□□ -1.96
RNF111Q6ZNA4 RNU6-589P-201ENST00000516485 107 ntBASIC2.79□□□□□ -1.96
RNF111Q6ZNA4 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
RNF111Q6ZNA4 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.79□□□□□ -1.96
RNF111Q6ZNA4 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.79□□□□□ -1.96
RNF111Q6ZNA4 MTND5P32-201ENST00000560711 1802 ntBASIC2.79□□□□□ -1.96
RNF111Q6ZNA4 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
RNF111Q6ZNA4 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.78□□□□□ -1.96
RNF111Q6ZNA4 MIR126-201ENST00000362291 85 ntBASIC2.78□□□□□ -1.96
RNF111Q6ZNA4 RNU6-461P-201ENST00000364195 107 ntBASIC2.78□□□□□ -1.96
RNF111Q6ZNA4 SNORD61-201ENST00000384252 73 ntBASIC2.78□□□□□ -1.96
RNF111Q6ZNA4 RNA5SP323-201ENST00000391094 133 ntBASIC2.78□□□□□ -1.96
RNF111Q6ZNA4 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.78□□□□□ -1.96
RNF111Q6ZNA4 AC003685.2-201ENST00000422795 395 ntBASIC2.78□□□□□ -1.96
RNF111Q6ZNA4 RNU1-142P-201ENST00000516682 145 ntBASIC2.78□□□□□ -1.96
RNF111Q6ZNA4 CYCSP26-201ENST00000534107 320 ntBASIC2.78□□□□□ -1.96
RNF111Q6ZNA4 AC107016.2-201ENST00000547968 190 ntBASIC2.78□□□□□ -1.96
RNF111Q6ZNA4 AC008507.4-201ENST00000585464 127 ntBASIC2.78□□□□□ -1.96
RNF111Q6ZNA4 AC022217.4-201ENST00000604389 163 ntBASIC2.78□□□□□ -1.96
RNF111Q6ZNA4 AL670379.3-201ENST00000605040 251 ntBASIC2.78□□□□□ -1.96
RNF111Q6ZNA4 U6.108-201ENST00000637764 58 ntBASIC2.78□□□□□ -1.96
RNF111Q6ZNA4 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
RNF111Q6ZNA4 AC018630.2-201ENST00000534866 2403 ntBASIC2.78□□□□□ -1.97
RNF111Q6ZNA4 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
RNF111Q6ZNA4 MIR548A3-201ENST00000385297 97 ntBASIC2.77□□□□□ -1.97
RNF111Q6ZNA4 RNU11-5P-201ENST00000391216 129 ntBASIC2.77□□□□□ -1.97
RNF111Q6ZNA4 MIR1289-1-201ENST00000408836 144 ntBASIC2.77□□□□□ -1.97
RNF111Q6ZNA4 Y_RNA.617-201ENST00000410920 90 ntBASIC2.77□□□□□ -1.97
RNF111Q6ZNA4 AC018634.1-201ENST00000437554 401 ntBASIC2.77□□□□□ -1.97
RNF111Q6ZNA4 AL353689.1-201ENST00000438895 199 ntBASIC2.77□□□□□ -1.97
RNF111Q6ZNA4 Y_RNA.666-201ENST00000516187 112 ntBASIC2.77□□□□□ -1.97
RNF111Q6ZNA4 RNU6-341P-201ENST00000516973 96 ntBASIC2.77□□□□□ -1.97
RNF111Q6ZNA4 AC005000.2-201ENST00000605468 310 ntBASIC2.77□□□□□ -1.97
RNF111Q6ZNA4 AC004832.5-201ENST00000608677 401 ntBASIC2.77□□□□□ -1.97
RNF111Q6ZNA4 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.77□□□□□ -1.97
RNF111Q6ZNA4 AL591926.4-201ENST00000616895 298 ntBASIC2.77□□□□□ -1.97
RNF111Q6ZNA4 AL121890.5-201ENST00000620848 304 ntBASIC2.77□□□□□ -1.97
RNF111Q6ZNA4 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.77□□□□□ -1.97
RNF111Q6ZNA4 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.77□□□□□ -1.97
RNF111Q6ZNA4 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
RNF111Q6ZNA4 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.77□□□□□ -1.97
RNF111Q6ZNA4 SNORA8-201ENST00000384574 139 ntBASIC2.76□□□□□ -1.97
RNF111Q6ZNA4 SNORA48.2-201ENST00000390926 124 ntBASIC2.76□□□□□ -1.97
RNF111Q6ZNA4 AL117342.1-201ENST00000404861 406 ntBASIC2.76□□□□□ -1.97
RNF111Q6ZNA4 SRIP3-201ENST00000413200 219 ntBASIC2.76□□□□□ -1.97
RNF111Q6ZNA4 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.76□□□□□ -1.97
RNF111Q6ZNA4 AF228730.3-201ENST00000436691 102 ntBASIC2.76□□□□□ -1.97
RNF111Q6ZNA4 Y_RNA.651-201ENST00000459380 103 ntBASIC2.76□□□□□ -1.97
RNF111Q6ZNA4 SCGB1D5P-201ENST00000515134 247 ntBASIC2.76□□□□□ -1.97
RNF111Q6ZNA4 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.76□□□□□ -1.97
RNF111Q6ZNA4 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.76□□□□□ -1.97
RNF111Q6ZNA4 ZNF271P-202ENST00000465539 1970 ntBASIC2.76□□□□□ -1.97
RNF111Q6ZNA4 AL161431.1-201ENST00000618966 4205 ntBASIC2.76□□□□□ -1.97
RNF111Q6ZNA4 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
RNF111Q6ZNA4 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
RNF111Q6ZNA4 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
RNF111Q6ZNA4 RNU6-1164P-201ENST00000364428 107 ntBASIC2.75□□□□□ -1.97
RNF111Q6ZNA4 SNORD116-21-201ENST00000384507 92 ntBASIC2.75□□□□□ -1.97
RNF111Q6ZNA4 RNU6-1072P-201ENST00000384703 107 ntBASIC2.75□□□□□ -1.97
RNF111Q6ZNA4 RNU6-443P-201ENST00000384780 107 ntBASIC2.75□□□□□ -1.97
RNF111Q6ZNA4 MIR128-1-201ENST00000384921 82 ntBASIC2.75□□□□□ -1.97
RNF111Q6ZNA4 ATP5J2P3-201ENST00000451550 258 ntBASIC2.75□□□□□ -1.97
RNF111Q6ZNA4 NDUFA5P6-201ENST00000542110 379 ntBASIC2.75□□□□□ -1.97
RNF111Q6ZNA4 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
RNF111Q6ZNA4 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.75□□□□□ -1.97
RNF111Q6ZNA4 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.75□□□□□ -1.97
RNF111Q6ZNA4 AC092435.3-201ENST00000565538 3654 ntBASIC2.74□□□□□ -1.97
RNF111Q6ZNA4 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
RNF111Q6ZNA4 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.74□□□□□ -1.97
RNF111Q6ZNA4 SNORA1B-201ENST00000362535 133 ntBASIC2.74□□□□□ -1.97
RNF111Q6ZNA4 Y_RNA.35-201ENST00000362601 101 ntBASIC2.74□□□□□ -1.97
RNF111Q6ZNA4 Y_RNA.99-201ENST00000363138 105 ntBASIC2.74□□□□□ -1.97
RNF111Q6ZNA4 SNORA9.2-201ENST00000365361 133 ntBASIC2.74□□□□□ -1.97
RNF111Q6ZNA4 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
RNF111Q6ZNA4 MIR1262-201ENST00000408276 93 ntBASIC2.74□□□□□ -1.97
RNF111Q6ZNA4 Z92545.1-201ENST00000411782 234 ntBASIC2.74□□□□□ -1.97
RNF111Q6ZNA4 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.74□□□□□ -1.97
RNF111Q6ZNA4 MTATP6P21-201ENST00000440681 189 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms