Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 Y_RNA.105-201ENST00000363182 111 ntBASIC1.25□□□□□ -2.21
ZNF544Q6NX49 Y_RNA.145-201ENST00000363527 102 ntBASIC1.25□□□□□ -2.21
ZNF544Q6NX49 SNORA7.1-201ENST00000363750 139 ntBASIC1.25□□□□□ -2.21
ZNF544Q6NX49 RNU6-770P-201ENST00000363929 105 ntBASIC1.25□□□□□ -2.21
ZNF544Q6NX49 Y_RNA.210-201ENST00000364161 110 ntBASIC1.25□□□□□ -2.21
ZNF544Q6NX49 Y_RNA.331-201ENST00000365267 102 ntBASIC1.25□□□□□ -2.21
ZNF544Q6NX49 Y_RNA.581-201ENST00000391017 97 ntBASIC1.25□□□□□ -2.21
ZNF544Q6NX49 RNU11-5P-201ENST00000391216 129 ntBASIC1.25□□□□□ -2.21
ZNF544Q6NX49 AC004965.1-201ENST00000413033 213 ntBASIC1.25□□□□□ -2.21
ZNF544Q6NX49 AC113618.1-201ENST00000416747 285 ntBASIC1.25□□□□□ -2.21
ZNF544Q6NX49 AL731563.1-201ENST00000442202 214 ntBASIC1.25□□□□□ -2.21
ZNF544Q6NX49 LINC01399-202ENST00000458450 244 ntBASIC1.25□□□□□ -2.21
ZNF544Q6NX49 RNU7-94P-201ENST00000459576 63 ntBASIC1.25□□□□□ -2.21
ZNF544Q6NX49 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.25□□□□□ -2.21
ZNF544Q6NX49 RPL36AP21-201ENST00000490372 323 ntBASIC1.25□□□□□ -2.21
ZNF544Q6NX49 RNU6-496P-201ENST00000516145 99 ntBASIC1.25□□□□□ -2.21
ZNF544Q6NX49 RNU6-397P-201ENST00000516226 104 ntBASIC1.25□□□□□ -2.21
ZNF544Q6NX49 Y_RNA.720-201ENST00000517166 92 ntBASIC1.25□□□□□ -2.21
ZNF544Q6NX49 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.25□□□□□ -2.21
ZNF544Q6NX49 MIR4421-201ENST00000578133 69 ntBASIC1.25□□□□□ -2.21
ZNF544Q6NX49 AC022217.4-201ENST00000604389 163 ntBASIC1.25□□□□□ -2.21
ZNF544Q6NX49 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.25□□□□□ -2.21
ZNF544Q6NX49 AC018630.2-201ENST00000534866 2403 ntBASIC1.25□□□□□ -2.21
ZNF544Q6NX49 MIR26B-201ENST00000362251 77 ntBASIC1.24□□□□□ -2.21
ZNF544Q6NX49 RNU4-13P-201ENST00000364019 141 ntBASIC1.24□□□□□ -2.21
ZNF544Q6NX49 RNU6-203P-201ENST00000384038 104 ntBASIC1.24□□□□□ -2.21
ZNF544Q6NX49 RNU6-505P-201ENST00000384427 107 ntBASIC1.24□□□□□ -2.21
ZNF544Q6NX49 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.24□□□□□ -2.21
ZNF544Q6NX49 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.24□□□□□ -2.21
ZNF544Q6NX49 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.24□□□□□ -2.21
ZNF544Q6NX49 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.24□□□□□ -2.21
ZNF544Q6NX49 HSPE1P25-201ENST00000455484 251 ntBASIC1.24□□□□□ -2.21
ZNF544Q6NX49 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.24□□□□□ -2.21
ZNF544Q6NX49 MRPS35P2-201ENST00000508242 191 ntBASIC1.24□□□□□ -2.21
ZNF544Q6NX49 TRMT112P2-201ENST00000512910 132 ntBASIC1.24□□□□□ -2.21
ZNF544Q6NX49 RN7SKP179-201ENST00000516126 217 ntBASIC1.24□□□□□ -2.21
ZNF544Q6NX49 RNU6-1278P-201ENST00000516130 107 ntBASIC1.24□□□□□ -2.21
ZNF544Q6NX49 SCARNA15.1-201ENST00000516384 125 ntBASIC1.24□□□□□ -2.21
ZNF544Q6NX49 RNA5SP481-201ENST00000516814 122 ntBASIC1.24□□□□□ -2.21
ZNF544Q6NX49 SNORA40.15-201ENST00000516884 107 ntBASIC1.24□□□□□ -2.21
ZNF544Q6NX49 RNU7-110P-201ENST00000516891 62 ntBASIC1.24□□□□□ -2.21
ZNF544Q6NX49 RNU7-172P-201ENST00000517125 64 ntBASIC1.24□□□□□ -2.21
ZNF544Q6NX49 AC091178.2-201ENST00000584401 117 ntBASIC1.24□□□□□ -2.21
ZNF544Q6NX49 MIR4781-201ENST00000585250 76 ntBASIC1.24□□□□□ -2.21
ZNF544Q6NX49 AC007742.2-201ENST00000618226 398 ntBASIC1.24□□□□□ -2.21
ZNF544Q6NX49 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
ZNF544Q6NX49 Y_RNA.136-201ENST00000363444 102 ntBASIC1.23□□□□□ -2.21
ZNF544Q6NX49 SNORD113-8-201ENST00000363497 74 ntBASIC1.23□□□□□ -2.21
ZNF544Q6NX49 Y_RNA.329-201ENST00000365209 107 ntBASIC1.23□□□□□ -2.21
ZNF544Q6NX49 RNU6-407P-201ENST00000365280 104 ntBASIC1.23□□□□□ -2.21
ZNF544Q6NX49 RNU6-439P-201ENST00000384188 106 ntBASIC1.23□□□□□ -2.21
ZNF544Q6NX49 RNU6-21P-201ENST00000384710 107 ntBASIC1.23□□□□□ -2.21
ZNF544Q6NX49 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.23□□□□□ -2.21
ZNF544Q6NX49 MIR758-201ENST00000390227 88 ntBASIC1.23□□□□□ -2.21
ZNF544Q6NX49 RNU6-360P-201ENST00000390944 104 ntBASIC1.23□□□□□ -2.21
ZNF544Q6NX49 RNA5SP323-201ENST00000391094 133 ntBASIC1.23□□□□□ -2.21
ZNF544Q6NX49 RNU6-1109P-201ENST00000391187 107 ntBASIC1.23□□□□□ -2.21
ZNF544Q6NX49 RNU4-30P-201ENST00000410245 143 ntBASIC1.23□□□□□ -2.21
ZNF544Q6NX49 RNU6-710P-201ENST00000410424 105 ntBASIC1.23□□□□□ -2.21
ZNF544Q6NX49 RNU6-1186P-201ENST00000410429 97 ntBASIC1.23□□□□□ -2.21
ZNF544Q6NX49 AL606517.2-201ENST00000442855 241 ntBASIC1.23□□□□□ -2.21
ZNF544Q6NX49 MTND5P22-201ENST00000458380 195 ntBASIC1.23□□□□□ -2.21
ZNF544Q6NX49 HMGN1P10-201ENST00000474557 553 ntBASIC1.23□□□□□ -2.21
ZNF544Q6NX49 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.23□□□□□ -2.21
ZNF544Q6NX49 AC027419.1-201ENST00000522976 328 ntBASIC1.23□□□□□ -2.21
ZNF544Q6NX49 AC073413.2-201ENST00000604332 360 ntBASIC1.23□□□□□ -2.21
ZNF544Q6NX49 AP001485.1-201ENST00000604799 199 ntBASIC1.23□□□□□ -2.21
ZNF544Q6NX49 AC099654.10-201ENST00000640395 161 ntBASIC1.23□□□□□ -2.21
ZNF544Q6NX49 Y_RNA.19-201ENST00000362462 99 ntBASIC1.22□□□□□ -2.21
ZNF544Q6NX49 RNU4-90P-201ENST00000362773 141 ntBASIC1.22□□□□□ -2.21
ZNF544Q6NX49 snoU2_19.2-201ENST00000363024 80 ntBASIC1.22□□□□□ -2.21
ZNF544Q6NX49 Y_RNA.238-201ENST00000364441 102 ntBASIC1.22□□□□□ -2.21
ZNF544Q6NX49 Y_RNA.286-201ENST00000364813 102 ntBASIC1.22□□□□□ -2.21
ZNF544Q6NX49 SNORD26-201ENST00000384147 75 ntBASIC1.22□□□□□ -2.21
ZNF544Q6NX49 MIR562-201ENST00000384894 95 ntBASIC1.22□□□□□ -2.21
ZNF544Q6NX49 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
ZNF544Q6NX49 AL162725.1-201ENST00000435405 301 ntBASIC1.22□□□□□ -2.21
ZNF544Q6NX49 HSPE1P9-201ENST00000440046 311 ntBASIC1.22□□□□□ -2.21
ZNF544Q6NX49 AC005840.1-201ENST00000498412 377 ntBASIC1.22□□□□□ -2.21
ZNF544Q6NX49 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.22□□□□□ -2.21
ZNF544Q6NX49 RNU6-1337P-201ENST00000516525 95 ntBASIC1.22□□□□□ -2.21
ZNF544Q6NX49 AL117187.1-201ENST00000555482 181 ntBASIC1.22□□□□□ -2.21
ZNF544Q6NX49 MIR6079-201ENST00000635807 62 ntBASIC1.22□□□□□ -2.21
ZNF544Q6NX49 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.21□□□□□ -2.22
ZNF544Q6NX49 Y_RNA.26-201ENST00000362539 101 ntBASIC1.21□□□□□ -2.22
ZNF544Q6NX49 RNU6-324P-201ENST00000363957 106 ntBASIC1.21□□□□□ -2.22
ZNF544Q6NX49 RNU6-806P-201ENST00000365147 105 ntBASIC1.21□□□□□ -2.22
ZNF544Q6NX49 Y_RNA.368-201ENST00000365547 113 ntBASIC1.21□□□□□ -2.22
ZNF544Q6NX49 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.21□□□□□ -2.22
ZNF544Q6NX49 Y_RNA.383-201ENST00000383855 97 ntBASIC1.21□□□□□ -2.22
ZNF544Q6NX49 Y_RNA.456-201ENST00000384232 111 ntBASIC1.21□□□□□ -2.22
ZNF544Q6NX49 RNU6-102P-201ENST00000384485 104 ntBASIC1.21□□□□□ -2.22
ZNF544Q6NX49 Y_RNA.518-201ENST00000384552 113 ntBASIC1.21□□□□□ -2.22
ZNF544Q6NX49 RNU6-950P-201ENST00000384651 107 ntBASIC1.21□□□□□ -2.22
ZNF544Q6NX49 MIR520G-201ENST00000385064 90 ntBASIC1.21□□□□□ -2.22
ZNF544Q6NX49 RNA5SP109-201ENST00000391010 116 ntBASIC1.21□□□□□ -2.22
ZNF544Q6NX49 FTH1P12-201ENST00000432137 551 ntBASIC1.21□□□□□ -2.22
ZNF544Q6NX49 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.21□□□□□ -2.22
ZNF544Q6NX49 SNORA31.10-201ENST00000516482 106 ntBASIC1.21□□□□□ -2.22
ZNF544Q6NX49 RNU6-341P-201ENST00000516973 96 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 152 ms