Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 AC006483.1-201ENST00000487308 313 ntBASIC3.28□□□□□ -1.88
PRPF40BQ6NWY9 RNA5SP282-201ENST00000516355 108 ntBASIC3.28□□□□□ -1.88
PRPF40BQ6NWY9 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
PRPF40BQ6NWY9 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PRPF40BQ6NWY9 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
PRPF40BQ6NWY9 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.27□□□□□ -1.89
PRPF40BQ6NWY9 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.27□□□□□ -1.89
PRPF40BQ6NWY9 FAM35CP-201ENST00000554755 2470 ntBASIC3.27□□□□□ -1.89
PRPF40BQ6NWY9 Y_RNA.273-201ENST00000364703 102 ntBASIC3.27□□□□□ -1.89
PRPF40BQ6NWY9 RNU6-915P-201ENST00000364943 103 ntBASIC3.27□□□□□ -1.89
PRPF40BQ6NWY9 MIR561-201ENST00000385216 97 ntBASIC3.27□□□□□ -1.89
PRPF40BQ6NWY9 Y_RNA.584-201ENST00000391090 114 ntBASIC3.27□□□□□ -1.89
PRPF40BQ6NWY9 SNORD88.1-201ENST00000408684 91 ntBASIC3.27□□□□□ -1.89
PRPF40BQ6NWY9 RNU6-1186P-201ENST00000410429 97 ntBASIC3.27□□□□□ -1.89
PRPF40BQ6NWY9 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.27□□□□□ -1.89
PRPF40BQ6NWY9 RPS15AP28-201ENST00000435088 386 ntBASIC3.27□□□□□ -1.89
PRPF40BQ6NWY9 RNA5SP76-201ENST00000516277 87 ntBASIC3.27□□□□□ -1.89
PRPF40BQ6NWY9 RNU6-1096P-201ENST00000517089 102 ntBASIC3.27□□□□□ -1.89
PRPF40BQ6NWY9 uc_338.4-201ENST00000616635 176 ntBASIC3.27□□□□□ -1.89
PRPF40BQ6NWY9 AP001340.1-201ENST00000624405 217 ntBASIC3.27□□□□□ -1.89
PRPF40BQ6NWY9 AC138915.1-201ENST00000565427 1685 ntBASIC3.27□□□□□ -1.89
PRPF40BQ6NWY9 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC3.26□□□□□ -1.89
PRPF40BQ6NWY9 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.26□□□□□ -1.89
PRPF40BQ6NWY9 RNU6-461P-201ENST00000364195 107 ntBASIC3.26□□□□□ -1.89
PRPF40BQ6NWY9 RNU6-1082P-201ENST00000364574 107 ntBASIC3.26□□□□□ -1.89
PRPF40BQ6NWY9 RNU6-484P-201ENST00000384016 107 ntBASIC3.26□□□□□ -1.89
PRPF40BQ6NWY9 RNU6-220P-201ENST00000390919 107 ntBASIC3.26□□□□□ -1.89
PRPF40BQ6NWY9 RNU11-5P-201ENST00000391216 129 ntBASIC3.26□□□□□ -1.89
PRPF40BQ6NWY9 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.26□□□□□ -1.89
PRPF40BQ6NWY9 RNU4-57P-201ENST00000515980 135 ntBASIC3.26□□□□□ -1.89
PRPF40BQ6NWY9 RNA5SP320-201ENST00000516263 124 ntBASIC3.26□□□□□ -1.89
PRPF40BQ6NWY9 RNU6-667P-201ENST00000517186 102 ntBASIC3.26□□□□□ -1.89
PRPF40BQ6NWY9 AC073413.2-201ENST00000604332 360 ntBASIC3.26□□□□□ -1.89
PRPF40BQ6NWY9 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.26□□□□□ -1.89
PRPF40BQ6NWY9 U6.73-201ENST00000619194 103 ntBASIC3.26□□□□□ -1.89
PRPF40BQ6NWY9 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
PRPF40BQ6NWY9 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
PRPF40BQ6NWY9 AC245060.5-201ENST00000610778 3293 ntBASIC3.25□□□□□ -1.89
PRPF40BQ6NWY9 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
PRPF40BQ6NWY9 MIR520G-201ENST00000385064 90 ntBASIC3.25□□□□□ -1.89
PRPF40BQ6NWY9 SNORA26-201ENST00000391286 122 ntBASIC3.25□□□□□ -1.89
PRPF40BQ6NWY9 RNU4-53P-201ENST00000410828 140 ntBASIC3.25□□□□□ -1.89
PRPF40BQ6NWY9 AC245102.2-201ENST00000448956 180 ntBASIC3.25□□□□□ -1.89
PRPF40BQ6NWY9 RN7SL499P-201ENST00000481141 276 ntBASIC3.25□□□□□ -1.89
PRPF40BQ6NWY9 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC3.25□□□□□ -1.89
PRPF40BQ6NWY9 AL449363.1-201ENST00000617815 186 ntBASIC3.25□□□□□ -1.89
PRPF40BQ6NWY9 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
PRPF40BQ6NWY9 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.24□□□□□ -1.89
PRPF40BQ6NWY9 U8.9-201ENST00000365667 134 ntBASIC3.24□□□□□ -1.89
PRPF40BQ6NWY9 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.24□□□□□ -1.89
PRPF40BQ6NWY9 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.24□□□□□ -1.89
PRPF40BQ6NWY9 AC104332.2-201ENST00000429959 156 ntBASIC3.24□□□□□ -1.89
PRPF40BQ6NWY9 RN7SL297P-201ENST00000483161 293 ntBASIC3.24□□□□□ -1.89
PRPF40BQ6NWY9 SNORD77.4-201ENST00000516158 81 ntBASIC3.24□□□□□ -1.89
PRPF40BQ6NWY9 Y_RNA.686-201ENST00000516548 134 ntBASIC3.24□□□□□ -1.89
PRPF40BQ6NWY9 IGKV3-31-201ENST00000523109 329 ntBASIC3.24□□□□□ -1.89
PRPF40BQ6NWY9 AL160236.1-201ENST00000556317 195 ntBASIC3.24□□□□□ -1.89
PRPF40BQ6NWY9 Y_RNA.757-201ENST00000578934 114 ntBASIC3.24□□□□□ -1.89
PRPF40BQ6NWY9 AC007229.1-201ENST00000590455 412 ntBASIC3.24□□□□□ -1.89
PRPF40BQ6NWY9 U2.20-201ENST00000613956 192 ntBASIC3.24□□□□□ -1.89
PRPF40BQ6NWY9 MIR6733-201ENST00000635723 61 ntBASIC3.24□□□□□ -1.89
PRPF40BQ6NWY9 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.24□□□□□ -1.89
PRPF40BQ6NWY9 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
PRPF40BQ6NWY9 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PRPF40BQ6NWY9 snoU2-30.2-201ENST00000362805 70 ntBASIC3.23□□□□□ -1.89
PRPF40BQ6NWY9 RNU6-1209P-201ENST00000363655 107 ntBASIC3.23□□□□□ -1.89
PRPF40BQ6NWY9 Y_RNA.353-201ENST00000365440 108 ntBASIC3.23□□□□□ -1.89
PRPF40BQ6NWY9 RNU6-1336P-201ENST00000383886 109 ntBASIC3.23□□□□□ -1.89
PRPF40BQ6NWY9 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
PRPF40BQ6NWY9 AC060773.1-201ENST00000421698 310 ntBASIC3.23□□□□□ -1.89
PRPF40BQ6NWY9 AC011406.1-201ENST00000512440 370 ntBASIC3.23□□□□□ -1.89
PRPF40BQ6NWY9 RNA5SP153-201ENST00000516498 76 ntBASIC3.23□□□□□ -1.89
PRPF40BQ6NWY9 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.23□□□□□ -1.89
PRPF40BQ6NWY9 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.23□□□□□ -1.89
PRPF40BQ6NWY9 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.23□□□□□ -1.89
PRPF40BQ6NWY9 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
PRPF40BQ6NWY9 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
PRPF40BQ6NWY9 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
PRPF40BQ6NWY9 Y_RNA.796-201ENST00000364268 102 ntBASIC3.22□□□□□ -1.89
PRPF40BQ6NWY9 Y_RNA.251-201ENST00000364551 99 ntBASIC3.22□□□□□ -1.89
PRPF40BQ6NWY9 Y_RNA.799-201ENST00000364992 102 ntBASIC3.22□□□□□ -1.89
PRPF40BQ6NWY9 SNORD11-201ENST00000459124 84 ntBASIC3.22□□□□□ -1.89
PRPF40BQ6NWY9 RNU6-126P-201ENST00000516685 103 ntBASIC3.22□□□□□ -1.89
PRPF40BQ6NWY9 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.22□□□□□ -1.89
PRPF40BQ6NWY9 RNY1P11-201ENST00000363759 113 ntBASIC3.21□□□□□ -1.9
PRPF40BQ6NWY9 RNU6-978P-201ENST00000364371 103 ntBASIC3.21□□□□□ -1.9
PRPF40BQ6NWY9 SNORD114-30-201ENST00000364448 72 ntBASIC3.21□□□□□ -1.9
PRPF40BQ6NWY9 SNORD20-201ENST00000384550 80 ntBASIC3.21□□□□□ -1.9
PRPF40BQ6NWY9 SNORA26.7-201ENST00000391288 122 ntBASIC3.21□□□□□ -1.9
PRPF40BQ6NWY9 RNA5SP425-201ENST00000410336 112 ntBASIC3.21□□□□□ -1.9
PRPF40BQ6NWY9 AC233266.1-201ENST00000454518 96 ntBASIC3.21□□□□□ -1.9
PRPF40BQ6NWY9 snoU13.23-201ENST00000458863 104 ntBASIC3.21□□□□□ -1.9
PRPF40BQ6NWY9 OR9P1P-201ENST00000496431 281 ntBASIC3.21□□□□□ -1.9
PRPF40BQ6NWY9 RN7SKP179-201ENST00000516126 217 ntBASIC3.21□□□□□ -1.9
PRPF40BQ6NWY9 RNU6-1041P-201ENST00000516254 102 ntBASIC3.21□□□□□ -1.9
PRPF40BQ6NWY9 RNU7-149P-201ENST00000516739 59 ntBASIC3.21□□□□□ -1.9
PRPF40BQ6NWY9 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC3.21□□□□□ -1.9
PRPF40BQ6NWY9 MIR4662B-201ENST00000579498 81 ntBASIC3.21□□□□□ -1.9
PRPF40BQ6NWY9 AC242852.1-201ENST00000612151 96 ntBASIC3.21□□□□□ -1.9
PRPF40BQ6NWY9 Pinc.1-201ENST00000616452 154 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms