Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 MIR526A1-201ENST00000384897 85 ntBASIC0.91□□□□□ -2.26
ATL3Q6DD88 RNU6-370P-201ENST00000411008 104 ntBASIC0.91□□□□□ -2.26
ATL3Q6DD88 AC138393.2-201ENST00000414742 246 ntBASIC0.91□□□□□ -2.26
ATL3Q6DD88 AL354751.2-201ENST00000415471 210 ntBASIC0.91□□□□□ -2.26
ATL3Q6DD88 POLR2J4-204ENST00000418424 324 ntBASIC0.91□□□□□ -2.26
ATL3Q6DD88 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.91□□□□□ -2.26
ATL3Q6DD88 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.91□□□□□ -2.26
ATL3Q6DD88 snoU13.25-201ENST00000458945 104 ntBASIC0.91□□□□□ -2.26
ATL3Q6DD88 AC240442.1-201ENST00000616055 283 ntBASIC0.91□□□□□ -2.26
ATL3Q6DD88 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
ATL3Q6DD88 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
ATL3Q6DD88 AC068700.1-201ENST00000565862 3754 ntBASIC0.9□□□□□ -2.27
ATL3Q6DD88 RNU6-890P-201ENST00000384121 107 ntBASIC0.9□□□□□ -2.27
ATL3Q6DD88 MIR625-201ENST00000385047 85 ntBASIC0.9□□□□□ -2.27
ATL3Q6DD88 RNU6-910P-201ENST00000390844 107 ntBASIC0.9□□□□□ -2.27
ATL3Q6DD88 AL451046.2-201ENST00000403074 277 ntBASIC0.9□□□□□ -2.27
ATL3Q6DD88 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.9□□□□□ -2.27
ATL3Q6DD88 RNU2-54P-201ENST00000410299 190 ntBASIC0.9□□□□□ -2.27
ATL3Q6DD88 RNU6-1304P-201ENST00000411374 106 ntBASIC0.9□□□□□ -2.27
ATL3Q6DD88 AC233266.1-201ENST00000454518 96 ntBASIC0.9□□□□□ -2.27
ATL3Q6DD88 MTCO3P10-201ENST00000455912 772 ntBASIC0.9□□□□□ -2.27
ATL3Q6DD88 SNORD79.1-201ENST00000516069 84 ntBASIC0.9□□□□□ -2.27
ATL3Q6DD88 RNU6-966P-201ENST00000516479 104 ntBASIC0.9□□□□□ -2.27
ATL3Q6DD88 RNU6-1337P-201ENST00000516525 95 ntBASIC0.9□□□□□ -2.27
ATL3Q6DD88 RNU6-1012P-201ENST00000516606 109 ntBASIC0.9□□□□□ -2.27
ATL3Q6DD88 RNU6-1223P-201ENST00000517124 104 ntBASIC0.9□□□□□ -2.27
ATL3Q6DD88 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.9□□□□□ -2.27
ATL3Q6DD88 MIR151B-201ENST00000584249 96 ntBASIC0.9□□□□□ -2.27
ATL3Q6DD88 AC013244.2-201ENST00000603396 103 ntBASIC0.9□□□□□ -2.27
ATL3Q6DD88 AC242852.1-201ENST00000612151 96 ntBASIC0.9□□□□□ -2.27
ATL3Q6DD88 AC244015.1-201ENST00000622301 99 ntBASIC0.9□□□□□ -2.27
ATL3Q6DD88 AC027279.3-201ENST00000625055 122 ntBASIC0.9□□□□□ -2.27
ATL3Q6DD88 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.89□□□□□ -2.27
ATL3Q6DD88 Y_RNA.172-201ENST00000363765 102 ntBASIC0.89□□□□□ -2.27
ATL3Q6DD88 MIR200A-201ENST00000384875 90 ntBASIC0.89□□□□□ -2.27
ATL3Q6DD88 MIR146A-201ENST00000385201 99 ntBASIC0.89□□□□□ -2.27
ATL3Q6DD88 RNU2-61P-201ENST00000411069 191 ntBASIC0.89□□□□□ -2.27
ATL3Q6DD88 MRPS18CP6-201ENST00000423587 223 ntBASIC0.89□□□□□ -2.27
ATL3Q6DD88 AC002429.1-201ENST00000437672 148 ntBASIC0.89□□□□□ -2.27
ATL3Q6DD88 RBMX2P4-201ENST00000441256 376 ntBASIC0.89□□□□□ -2.27
ATL3Q6DD88 ELOCP24-201ENST00000456370 334 ntBASIC0.89□□□□□ -2.27
ATL3Q6DD88 SNORA25.10-201ENST00000515926 124 ntBASIC0.89□□□□□ -2.27
ATL3Q6DD88 SNORA20.3-201ENST00000516880 132 ntBASIC0.89□□□□□ -2.27
ATL3Q6DD88 RNU6-264P-201ENST00000517134 104 ntBASIC0.89□□□□□ -2.27
ATL3Q6DD88 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.89□□□□□ -2.27
ATL3Q6DD88 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.89□□□□□ -2.27
ATL3Q6DD88 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.89□□□□□ -2.27
ATL3Q6DD88 FAM106DP-201ENST00000586416 501 ntBASIC0.89□□□□□ -2.27
ATL3Q6DD88 AL355073.2-201ENST00000612106 557 ntBASIC0.89□□□□□ -2.27
ATL3Q6DD88 RNU6-626P-201ENST00000363354 107 ntBASIC0.88□□□□□ -2.27
ATL3Q6DD88 RNY3P11-201ENST00000364153 102 ntBASIC0.88□□□□□ -2.27
ATL3Q6DD88 SNORD114-24-201ENST00000365029 72 ntBASIC0.88□□□□□ -2.27
ATL3Q6DD88 RNU1-36P-201ENST00000365130 165 ntBASIC0.88□□□□□ -2.27
ATL3Q6DD88 MIR598-201ENST00000384868 97 ntBASIC0.88□□□□□ -2.27
ATL3Q6DD88 AL031003.1-201ENST00000404229 172 ntBASIC0.88□□□□□ -2.27
ATL3Q6DD88 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.88□□□□□ -2.27
ATL3Q6DD88 AC063976.4-201ENST00000421971 163 ntBASIC0.88□□□□□ -2.27
ATL3Q6DD88 RNU6-436P-201ENST00000516171 114 ntBASIC0.88□□□□□ -2.27
ATL3Q6DD88 MIR4762-201ENST00000585261 75 ntBASIC0.88□□□□□ -2.27
ATL3Q6DD88 AC113139.1-201ENST00000605049 239 ntBASIC0.88□□□□□ -2.27
ATL3Q6DD88 AL020996.3-201ENST00000606617 222 ntBASIC0.88□□□□□ -2.27
ATL3Q6DD88 AC004832.4-201ENST00000608952 331 ntBASIC0.88□□□□□ -2.27
ATL3Q6DD88 U8.5-201ENST00000364528 136 ntBASIC0.87□□□□□ -2.27
ATL3Q6DD88 Y_RNA.390-201ENST00000383932 102 ntBASIC0.87□□□□□ -2.27
ATL3Q6DD88 RNU6-926P-201ENST00000384075 107 ntBASIC0.87□□□□□ -2.27
ATL3Q6DD88 RNU6-20P-201ENST00000384106 107 ntBASIC0.87□□□□□ -2.27
ATL3Q6DD88 MIR559-201ENST00000385188 96 ntBASIC0.87□□□□□ -2.27
ATL3Q6DD88 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.87□□□□□ -2.27
ATL3Q6DD88 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.87□□□□□ -2.27
ATL3Q6DD88 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.87□□□□□ -2.27
ATL3Q6DD88 AC104332.1-201ENST00000440471 797 ntBASIC0.87□□□□□ -2.27
ATL3Q6DD88 RPEP5-201ENST00000441137 268 ntBASIC0.87□□□□□ -2.27
ATL3Q6DD88 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.87□□□□□ -2.27
ATL3Q6DD88 FCF1P4-201ENST00000448326 183 ntBASIC0.87□□□□□ -2.27
ATL3Q6DD88 RPL39P39-201ENST00000455840 151 ntBASIC0.87□□□□□ -2.27
ATL3Q6DD88 RPL30P15-201ENST00000457129 321 ntBASIC0.87□□□□□ -2.27
ATL3Q6DD88 RPS29P1-201ENST00000465274 159 ntBASIC0.87□□□□□ -2.27
ATL3Q6DD88 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.87□□□□□ -2.27
ATL3Q6DD88 RNU6-947P-201ENST00000516264 106 ntBASIC0.87□□□□□ -2.27
ATL3Q6DD88 RNU6-277P-201ENST00000516272 106 ntBASIC0.87□□□□□ -2.27
ATL3Q6DD88 RNU6-911P-201ENST00000516523 104 ntBASIC0.87□□□□□ -2.27
ATL3Q6DD88 RNU6-113P-201ENST00000516653 101 ntBASIC0.87□□□□□ -2.27
ATL3Q6DD88 RNU7-4P-201ENST00000516961 62 ntBASIC0.87□□□□□ -2.27
ATL3Q6DD88 AC144568.1-201ENST00000520139 137 ntBASIC0.87□□□□□ -2.27
ATL3Q6DD88 MIR3973-201ENST00000579824 107 ntBASIC0.87□□□□□ -2.27
ATL3Q6DD88 AL096861.1-201ENST00000610899 123 ntBASIC0.87□□□□□ -2.27
ATL3Q6DD88 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.87□□□□□ -2.27
ATL3Q6DD88 AL008636.1-201ENST00000625038 1018 ntBASIC0.87□□□□□ -2.27
ATL3Q6DD88 MIR6866-201ENST00000638146 69 ntBASIC0.87□□□□□ -2.27
ATL3Q6DD88 SNORD114-27-201ENST00000363766 70 ntBASIC0.86□□□□□ -2.27
ATL3Q6DD88 SNORD116-13-201ENST00000384408 92 ntBASIC0.86□□□□□ -2.27
ATL3Q6DD88 SNORA80D-201ENST00000384488 135 ntBASIC0.86□□□□□ -2.27
ATL3Q6DD88 MIR891A-201ENST00000401237 79 ntBASIC0.86□□□□□ -2.27
ATL3Q6DD88 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.86□□□□□ -2.27
ATL3Q6DD88 CHEK2P4-201ENST00000450340 246 ntBASIC0.86□□□□□ -2.27
ATL3Q6DD88 SNORA70.12-201ENST00000516084 153 ntBASIC0.86□□□□□ -2.27
ATL3Q6DD88 AC120024.3-201ENST00000603167 156 ntBASIC0.86□□□□□ -2.27
ATL3Q6DD88 AC211469.2-201ENST00000605461 205 ntBASIC0.86□□□□□ -2.27
ATL3Q6DD88 AC025253.1-201ENST00000613623 543 ntBASIC0.86□□□□□ -2.27
ATL3Q6DD88 AL591926.4-201ENST00000616895 298 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms