Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 ICE2P2-201ENST00000483823 2787 ntBASIC4.13□□□□□ -1.75
VARS2Q5ST30 SNORA25.9-201ENST00000365087 128 ntBASIC4.13□□□□□ -1.75
VARS2Q5ST30 MIR183-201ENST00000384958 110 ntBASIC4.13□□□□□ -1.75
VARS2Q5ST30 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
VARS2Q5ST30 SNORA26.6-201ENST00000391256 115 ntBASIC4.13□□□□□ -1.75
VARS2Q5ST30 Y_RNA.596-201ENST00000410462 109 ntBASIC4.13□□□□□ -1.75
VARS2Q5ST30 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.13□□□□□ -1.75
VARS2Q5ST30 RNA5SP310-201ENST00000459084 116 ntBASIC4.13□□□□□ -1.75
VARS2Q5ST30 RN7SL504P-201ENST00000494496 287 ntBASIC4.13□□□□□ -1.75
VARS2Q5ST30 MIR3124-201ENST00000582636 67 ntBASIC4.13□□□□□ -1.75
VARS2Q5ST30 MIR664A-201ENST00000626086 82 ntBASIC4.13□□□□□ -1.75
VARS2Q5ST30 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
VARS2Q5ST30 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.13□□□□□ -1.75
VARS2Q5ST30 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.13□□□□□ -1.75
VARS2Q5ST30 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
VARS2Q5ST30 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.12□□□□□ -1.75
VARS2Q5ST30 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
VARS2Q5ST30 RNA5SP133-201ENST00000363368 119 ntBASIC4.12□□□□□ -1.75
VARS2Q5ST30 Z98742.2-201ENST00000431564 187 ntBASIC4.12□□□□□ -1.75
VARS2Q5ST30 UBL5P3-201ENST00000475112 231 ntBASIC4.12□□□□□ -1.75
VARS2Q5ST30 IGLV3-17-201ENST00000519099 244 ntBASIC4.12□□□□□ -1.75
VARS2Q5ST30 AC005520.4-201ENST00000604337 90 ntBASIC4.12□□□□□ -1.75
VARS2Q5ST30 AC012676.2-201ENST00000619258 186 ntBASIC4.12□□□□□ -1.75
VARS2Q5ST30 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
VARS2Q5ST30 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
VARS2Q5ST30 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
VARS2Q5ST30 AC096644.4-201ENST00000563417 2912 ntBASIC4.11□□□□□ -1.75
VARS2Q5ST30 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
VARS2Q5ST30 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC4.11□□□□□ -1.75
VARS2Q5ST30 AC022695.1-201ENST00000522089 237 ntBASIC4.11□□□□□ -1.75
VARS2Q5ST30 AC103810.1-201ENST00000579873 453 ntBASIC4.11□□□□□ -1.75
VARS2Q5ST30 MIR4796-201ENST00000580742 81 ntBASIC4.11□□□□□ -1.75
VARS2Q5ST30 uc_338.25-201ENST00000613756 156 ntBASIC4.11□□□□□ -1.75
VARS2Q5ST30 AL591424.2-201ENST00000617023 128 ntBASIC4.11□□□□□ -1.75
VARS2Q5ST30 U6.105-201ENST00000637379 88 ntBASIC4.11□□□□□ -1.75
VARS2Q5ST30 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.11□□□□□ -1.75
VARS2Q5ST30 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
VARS2Q5ST30 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
VARS2Q5ST30 SNORA25.6-201ENST00000364121 118 ntBASIC4.1□□□□□ -1.75
VARS2Q5ST30 RNU6-865P-201ENST00000364772 107 ntBASIC4.1□□□□□ -1.75
VARS2Q5ST30 SNORA2B-201ENST00000384583 137 ntBASIC4.1□□□□□ -1.75
VARS2Q5ST30 MIR635-201ENST00000384830 98 ntBASIC4.1□□□□□ -1.75
VARS2Q5ST30 MIR199A2-201ENST00000385289 110 ntBASIC4.1□□□□□ -1.75
VARS2Q5ST30 RPS29P4-201ENST00000414733 161 ntBASIC4.1□□□□□ -1.75
VARS2Q5ST30 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.1□□□□□ -1.75
VARS2Q5ST30 RNU7-94P-201ENST00000459576 63 ntBASIC4.1□□□□□ -1.75
VARS2Q5ST30 RPS26P15-201ENST00000488067 348 ntBASIC4.1□□□□□ -1.75
VARS2Q5ST30 U3.45-201ENST00000607547 219 ntBASIC4.1□□□□□ -1.75
VARS2Q5ST30 SNORD3E-202ENST00000627253 216 ntBASIC4.1□□□□□ -1.75
VARS2Q5ST30 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
VARS2Q5ST30 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.1□□□□□ -1.75
VARS2Q5ST30 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
VARS2Q5ST30 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
VARS2Q5ST30 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
VARS2Q5ST30 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
VARS2Q5ST30 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC4.1□□□□□ -1.75
VARS2Q5ST30 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
VARS2Q5ST30 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.09□□□□□ -1.75
VARS2Q5ST30 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
VARS2Q5ST30 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.09□□□□□ -1.75
VARS2Q5ST30 AL442644.1-201ENST00000454390 3105 ntBASIC4.09□□□□□ -1.75
VARS2Q5ST30 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
VARS2Q5ST30 MIR340-201ENST00000362125 95 ntBASIC4.09□□□□□ -1.75
VARS2Q5ST30 Y_RNA.508-201ENST00000384502 114 ntBASIC4.09□□□□□ -1.75
VARS2Q5ST30 MIR520H-201ENST00000385126 88 ntBASIC4.09□□□□□ -1.75
VARS2Q5ST30 RNU6-205P-201ENST00000390858 107 ntBASIC4.09□□□□□ -1.75
VARS2Q5ST30 RNA5SP261-201ENST00000410536 106 ntBASIC4.09□□□□□ -1.75
VARS2Q5ST30 AC123900.1-201ENST00000420390 96 ntBASIC4.09□□□□□ -1.75
VARS2Q5ST30 RNU1-142P-201ENST00000516682 145 ntBASIC4.09□□□□□ -1.75
VARS2Q5ST30 RNU6-965P-201ENST00000516721 96 ntBASIC4.09□□□□□ -1.75
VARS2Q5ST30 RNU7-156P-201ENST00000517214 74 ntBASIC4.09□□□□□ -1.75
VARS2Q5ST30 MIR4513-201ENST00000581077 86 ntBASIC4.09□□□□□ -1.75
VARS2Q5ST30 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.09□□□□□ -1.75
VARS2Q5ST30 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.09□□□□□ -1.76
VARS2Q5ST30 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
VARS2Q5ST30 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
VARS2Q5ST30 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
VARS2Q5ST30 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.08□□□□□ -1.76
VARS2Q5ST30 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
VARS2Q5ST30 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
VARS2Q5ST30 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
VARS2Q5ST30 RNVU1-14-201ENST00000384770 164 ntBASIC4.08□□□□□ -1.76
VARS2Q5ST30 AC244636.1-201ENST00000421152 228 ntBASIC4.08□□□□□ -1.76
VARS2Q5ST30 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC4.08□□□□□ -1.76
VARS2Q5ST30 RN7SL293P-201ENST00000481765 281 ntBASIC4.08□□□□□ -1.76
VARS2Q5ST30 MIR7975-201ENST00000619350 68 ntBASIC4.08□□□□□ -1.76
VARS2Q5ST30 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
VARS2Q5ST30 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
VARS2Q5ST30 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
VARS2Q5ST30 AC002546.1-201ENST00000588041 2504 ntBASIC4.07□□□□□ -1.76
VARS2Q5ST30 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
VARS2Q5ST30 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC4.07□□□□□ -1.76
VARS2Q5ST30 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
VARS2Q5ST30 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
VARS2Q5ST30 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.07□□□□□ -1.76
VARS2Q5ST30 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.07□□□□□ -1.76
VARS2Q5ST30 Y_RNA.332-201ENST00000365271 113 ntBASIC4.07□□□□□ -1.76
VARS2Q5ST30 SNORD115-31-201ENST00000365318 82 ntBASIC4.07□□□□□ -1.76
VARS2Q5ST30 Y_RNA.448-201ENST00000384185 108 ntBASIC4.07□□□□□ -1.76
VARS2Q5ST30 SNORD38.2-201ENST00000384470 69 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms