Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
SNAP47Q5SQN1 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SNAP47Q5SQN1 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SNAP47Q5SQN1 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SNAP47Q5SQN1 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SNAP47Q5SQN1 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.87□□□□□ -1.95
SNAP47Q5SQN1 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
SNAP47Q5SQN1 SNORA12.1-201ENST00000390873 148 ntBASIC2.87□□□□□ -1.95
SNAP47Q5SQN1 SNORA26-201ENST00000391286 122 ntBASIC2.87□□□□□ -1.95
SNAP47Q5SQN1 MTND4LP9-201ENST00000427694 174 ntBASIC2.87□□□□□ -1.95
SNAP47Q5SQN1 AC245047.4-201ENST00000433189 144 ntBASIC2.87□□□□□ -1.95
SNAP47Q5SQN1 RPL39P40-201ENST00000445481 146 ntBASIC2.87□□□□□ -1.95
SNAP47Q5SQN1 RPL23AP94-201ENST00000512518 302 ntBASIC2.87□□□□□ -1.95
SNAP47Q5SQN1 RPPH1-2P-201ENST00000516688 293 ntBASIC2.87□□□□□ -1.95
SNAP47Q5SQN1 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.87□□□□□ -1.95
SNAP47Q5SQN1 AL591926.4-201ENST00000616895 298 ntBASIC2.87□□□□□ -1.95
SNAP47Q5SQN1 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
SNAP47Q5SQN1 AC108206.1-201ENST00000570186 4159 ntBASIC2.87□□□□□ -1.95
SNAP47Q5SQN1 Z82195.2-201ENST00000612348 18351 ntBASIC2.87□□□□□ -1.95
SNAP47Q5SQN1 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SNAP47Q5SQN1 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SNAP47Q5SQN1 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SNAP47Q5SQN1 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SNAP47Q5SQN1 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.86□□□□□ -1.95
SNAP47Q5SQN1 RNU6-1082P-201ENST00000364574 107 ntBASIC2.86□□□□□ -1.95
SNAP47Q5SQN1 Y_RNA.486-201ENST00000384398 107 ntBASIC2.86□□□□□ -1.95
SNAP47Q5SQN1 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.86□□□□□ -1.95
SNAP47Q5SQN1 RN7SL20P-201ENST00000488827 297 ntBASIC2.86□□□□□ -1.95
SNAP47Q5SQN1 MRPS17P9-201ENST00000511924 393 ntBASIC2.86□□□□□ -1.95
SNAP47Q5SQN1 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.86□□□□□ -1.95
SNAP47Q5SQN1 GTF3AP2-201ENST00000557014 266 ntBASIC2.86□□□□□ -1.95
SNAP47Q5SQN1 AC022217.4-201ENST00000604389 163 ntBASIC2.86□□□□□ -1.95
SNAP47Q5SQN1 AC007318.2-201ENST00000620999 243 ntBASIC2.86□□□□□ -1.95
SNAP47Q5SQN1 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SNAP47Q5SQN1 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
SNAP47Q5SQN1 MIR126-201ENST00000362291 85 ntBASIC2.85□□□□□ -1.95
SNAP47Q5SQN1 RNY1P11-201ENST00000363759 113 ntBASIC2.85□□□□□ -1.95
SNAP47Q5SQN1 SNORA25.7-201ENST00000364375 127 ntBASIC2.85□□□□□ -1.95
SNAP47Q5SQN1 RNU6-1081P-201ENST00000384537 107 ntBASIC2.85□□□□□ -1.95
SNAP47Q5SQN1 RNU6-460P-201ENST00000391158 108 ntBASIC2.85□□□□□ -1.95
SNAP47Q5SQN1 AL139132.1-201ENST00000431587 344 ntBASIC2.85□□□□□ -1.95
SNAP47Q5SQN1 AL049830.1-201ENST00000468034 425 ntBASIC2.85□□□□□ -1.95
SNAP47Q5SQN1 RNU2-56P-201ENST00000516826 190 ntBASIC2.85□□□□□ -1.95
SNAP47Q5SQN1 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SNAP47Q5SQN1 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SNAP47Q5SQN1 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.85□□□□□ -1.95
SNAP47Q5SQN1 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.84□□□□□ -1.95
SNAP47Q5SQN1 Y_RNA.251-201ENST00000364551 99 ntBASIC2.84□□□□□ -1.95
SNAP47Q5SQN1 RNU6-1336P-201ENST00000383886 109 ntBASIC2.84□□□□□ -1.95
SNAP47Q5SQN1 MIR181B1-201ENST00000385240 110 ntBASIC2.84□□□□□ -1.95
SNAP47Q5SQN1 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
SNAP47Q5SQN1 CYCSP49-201ENST00000420810 319 ntBASIC2.84□□□□□ -1.95
SNAP47Q5SQN1 AL606517.2-201ENST00000442855 241 ntBASIC2.84□□□□□ -1.95
SNAP47Q5SQN1 AL135938.1-201ENST00000443141 297 ntBASIC2.84□□□□□ -1.95
SNAP47Q5SQN1 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.84□□□□□ -1.95
SNAP47Q5SQN1 RN7SL297P-201ENST00000483161 293 ntBASIC2.84□□□□□ -1.95
SNAP47Q5SQN1 RNA5SP367-201ENST00000516557 118 ntBASIC2.84□□□□□ -1.95
SNAP47Q5SQN1 MIR548AI-201ENST00000579940 88 ntBASIC2.84□□□□□ -1.95
SNAP47Q5SQN1 AC008507.4-201ENST00000585464 127 ntBASIC2.84□□□□□ -1.95
SNAP47Q5SQN1 AC087685.1-201ENST00000587507 141 ntBASIC2.84□□□□□ -1.95
SNAP47Q5SQN1 AC069114.2-201ENST00000604699 304 ntBASIC2.84□□□□□ -1.95
SNAP47Q5SQN1 CTSLP2-204ENST00000629029 392 ntBASIC2.84□□□□□ -1.95
SNAP47Q5SQN1 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
SNAP47Q5SQN1 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
SNAP47Q5SQN1 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
SNAP47Q5SQN1 AC073325.2-201ENST00000339545 159 ntBASIC2.83□□□□□ -1.96
SNAP47Q5SQN1 RNU6-22P-201ENST00000384355 107 ntBASIC2.83□□□□□ -1.96
SNAP47Q5SQN1 RNA5SP274-201ENST00000410484 108 ntBASIC2.83□□□□□ -1.96
SNAP47Q5SQN1 AC245047.3-201ENST00000429428 127 ntBASIC2.83□□□□□ -1.96
SNAP47Q5SQN1 AC090142.3-201ENST00000519012 385 ntBASIC2.83□□□□□ -1.96
SNAP47Q5SQN1 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.83□□□□□ -1.96
SNAP47Q5SQN1 AC006023.1-201ENST00000603944 259 ntBASIC2.83□□□□□ -1.96
SNAP47Q5SQN1 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.82□□□□□ -1.96
SNAP47Q5SQN1 Y_RNA.66-201ENST00000362862 102 ntBASIC2.82□□□□□ -1.96
SNAP47Q5SQN1 Y_RNA.542-201ENST00000384641 111 ntBASIC2.82□□□□□ -1.96
SNAP47Q5SQN1 MIR597-201ENST00000384968 97 ntBASIC2.82□□□□□ -1.96
SNAP47Q5SQN1 MIR522-201ENST00000385071 87 ntBASIC2.82□□□□□ -1.96
SNAP47Q5SQN1 SNORD72-201ENST00000390994 80 ntBASIC2.82□□□□□ -1.96
SNAP47Q5SQN1 MIR1283-2-201ENST00000408621 87 ntBASIC2.82□□□□□ -1.96
SNAP47Q5SQN1 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.82□□□□□ -1.96
SNAP47Q5SQN1 MLLT10P1-201ENST00000418346 262 ntBASIC2.82□□□□□ -1.96
SNAP47Q5SQN1 RNA5SP356-201ENST00000515972 94 ntBASIC2.82□□□□□ -1.96
SNAP47Q5SQN1 Y_RNA.714-201ENST00000517065 90 ntBASIC2.82□□□□□ -1.96
SNAP47Q5SQN1 RNU6-365P-201ENST00000517113 106 ntBASIC2.82□□□□□ -1.96
SNAP47Q5SQN1 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SNAP47Q5SQN1 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.81□□□□□ -1.96
SNAP47Q5SQN1 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SNAP47Q5SQN1 RNA5SP109-201ENST00000391010 116 ntBASIC2.81□□□□□ -1.96
SNAP47Q5SQN1 RNU2-51P-201ENST00000410708 197 ntBASIC2.81□□□□□ -1.96
SNAP47Q5SQN1 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.81□□□□□ -1.96
SNAP47Q5SQN1 AP004217.1-201ENST00000480579 346 ntBASIC2.81□□□□□ -1.96
SNAP47Q5SQN1 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.81□□□□□ -1.96
SNAP47Q5SQN1 RN7SKP43-201ENST00000516173 320 ntBASIC2.81□□□□□ -1.96
SNAP47Q5SQN1 RNU6-479P-201ENST00000516348 105 ntBASIC2.81□□□□□ -1.96
SNAP47Q5SQN1 RNU6-62P-201ENST00000516526 102 ntBASIC2.81□□□□□ -1.96
SNAP47Q5SQN1 RNU6-971P-201ENST00000516920 106 ntBASIC2.81□□□□□ -1.96
SNAP47Q5SQN1 AC091544.4-201ENST00000555268 342 ntBASIC2.81□□□□□ -1.96
SNAP47Q5SQN1 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.81□□□□□ -1.96
SNAP47Q5SQN1 AP001340.1-201ENST00000624405 217 ntBASIC2.81□□□□□ -1.96
SNAP47Q5SQN1 RNU6-1019P-201ENST00000364424 107 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 133.2 ms