Protein–RNA interactions for Protein: Q4ZIN3

TMEM259, Membralin, humanhuman

Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM259Q4ZIN3 Y_RNA.366-201ENST00000365540 102 ntBASIC3.53□□□□□ -1.84
TMEM259Q4ZIN3 Y_RNA.547-201ENST00000384654 119 ntBASIC3.53□□□□□ -1.84
TMEM259Q4ZIN3 AC006989.1-201ENST00000427212 131 ntBASIC3.53□□□□□ -1.84
TMEM259Q4ZIN3 RN7SL594P-201ENST00000470590 287 ntBASIC3.53□□□□□ -1.84
TMEM259Q4ZIN3 AC005786.1-201ENST00000588553 154 ntBASIC3.53□□□□□ -1.84
TMEM259Q4ZIN3 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.53□□□□□ -1.84
TMEM259Q4ZIN3 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
TMEM259Q4ZIN3 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
TMEM259Q4ZIN3 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
TMEM259Q4ZIN3 RNU4-35P-201ENST00000362588 141 ntBASIC3.52□□□□□ -1.85
TMEM259Q4ZIN3 Y_RNA.309-201ENST00000365046 111 ntBASIC3.52□□□□□ -1.85
TMEM259Q4ZIN3 Y_RNA.336-201ENST00000365307 109 ntBASIC3.52□□□□□ -1.85
TMEM259Q4ZIN3 MIR29C-201ENST00000385231 88 ntBASIC3.52□□□□□ -1.85
TMEM259Q4ZIN3 RNU6-440P-201ENST00000390882 105 ntBASIC3.52□□□□□ -1.85
TMEM259Q4ZIN3 RNA5SP136-201ENST00000410906 107 ntBASIC3.52□□□□□ -1.85
TMEM259Q4ZIN3 TRIAP1P1-201ENST00000427062 225 ntBASIC3.52□□□□□ -1.85
TMEM259Q4ZIN3 STAG3L5P-204ENST00000443759 179 ntBASIC3.52□□□□□ -1.85
TMEM259Q4ZIN3 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC3.52□□□□□ -1.85
TMEM259Q4ZIN3 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.52□□□□□ -1.85
TMEM259Q4ZIN3 AC004486.1-201ENST00000546846 233 ntBASIC3.52□□□□□ -1.85
TMEM259Q4ZIN3 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.52□□□□□ -1.85
TMEM259Q4ZIN3 AC024614.2-201ENST00000577584 372 ntBASIC3.52□□□□□ -1.85
TMEM259Q4ZIN3 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.52□□□□□ -1.85
TMEM259Q4ZIN3 AL161756.2-201ENST00000604597 246 ntBASIC3.52□□□□□ -1.85
TMEM259Q4ZIN3 U4.6-201ENST00000621618 127 ntBASIC3.52□□□□□ -1.85
TMEM259Q4ZIN3 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
TMEM259Q4ZIN3 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
TMEM259Q4ZIN3 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.52□□□□□ -1.85
TMEM259Q4ZIN3 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
TMEM259Q4ZIN3 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.51□□□□□ -1.85
TMEM259Q4ZIN3 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
TMEM259Q4ZIN3 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.51□□□□□ -1.85
TMEM259Q4ZIN3 Y_RNA.37-201ENST00000362606 108 ntBASIC3.51□□□□□ -1.85
TMEM259Q4ZIN3 SNORA9-201ENST00000384215 133 ntBASIC3.51□□□□□ -1.85
TMEM259Q4ZIN3 SNORD17-201ENST00000390930 237 ntBASIC3.51□□□□□ -1.85
TMEM259Q4ZIN3 RPL21P3-201ENST00000395517 478 ntBASIC3.51□□□□□ -1.85
TMEM259Q4ZIN3 CALM2P4-201ENST00000430810 426 ntBASIC3.51□□□□□ -1.85
TMEM259Q4ZIN3 AL445646.1-201ENST00000431784 216 ntBASIC3.51□□□□□ -1.85
TMEM259Q4ZIN3 UBBP3-201ENST00000445497 241 ntBASIC3.51□□□□□ -1.85
TMEM259Q4ZIN3 RNU7-26P-201ENST00000458980 63 ntBASIC3.51□□□□□ -1.85
TMEM259Q4ZIN3 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC3.51□□□□□ -1.85
TMEM259Q4ZIN3 AC025518.1-201ENST00000479856 347 ntBASIC3.51□□□□□ -1.85
TMEM259Q4ZIN3 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.51□□□□□ -1.85
TMEM259Q4ZIN3 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.51□□□□□ -1.85
TMEM259Q4ZIN3 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.51□□□□□ -1.85
TMEM259Q4ZIN3 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.51□□□□□ -1.85
TMEM259Q4ZIN3 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TMEM259Q4ZIN3 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.5□□□□□ -1.85
TMEM259Q4ZIN3 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.5□□□□□ -1.85
TMEM259Q4ZIN3 AC093010.3-201ENST00000570269 15214 ntBASIC3.5□□□□□ -1.85
TMEM259Q4ZIN3 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
TMEM259Q4ZIN3 MIR30E-201ENST00000362104 92 ntBASIC3.5□□□□□ -1.85
TMEM259Q4ZIN3 RNA5SP42-201ENST00000364278 115 ntBASIC3.5□□□□□ -1.85
TMEM259Q4ZIN3 RN7SKP111-201ENST00000410349 271 ntBASIC3.5□□□□□ -1.85
TMEM259Q4ZIN3 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.5□□□□□ -1.85
TMEM259Q4ZIN3 RPL23AP83-201ENST00000434984 473 ntBASIC3.5□□□□□ -1.85
TMEM259Q4ZIN3 HMGN2P32-201ENST00000444648 269 ntBASIC3.5□□□□□ -1.85
TMEM259Q4ZIN3 RNU6-240P-201ENST00000516098 97 ntBASIC3.5□□□□□ -1.85
TMEM259Q4ZIN3 AC084364.2-201ENST00000546924 395 ntBASIC3.5□□□□□ -1.85
TMEM259Q4ZIN3 AC015726.2-201ENST00000620112 122 ntBASIC3.5□□□□□ -1.85
TMEM259Q4ZIN3 MIR8054-201ENST00000620877 86 ntBASIC3.5□□□□□ -1.85
TMEM259Q4ZIN3 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
TMEM259Q4ZIN3 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TMEM259Q4ZIN3 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TMEM259Q4ZIN3 Y_RNA.116-201ENST00000363292 103 ntBASIC3.49□□□□□ -1.85
TMEM259Q4ZIN3 SNORA38-201ENST00000363946 132 ntBASIC3.49□□□□□ -1.85
TMEM259Q4ZIN3 RNU6-163P-201ENST00000384396 106 ntBASIC3.49□□□□□ -1.85
TMEM259Q4ZIN3 BX510359.4-201ENST00000423750 193 ntBASIC3.49□□□□□ -1.85
TMEM259Q4ZIN3 SNRPGP14-201ENST00000435400 219 ntBASIC3.49□□□□□ -1.85
TMEM259Q4ZIN3 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC3.49□□□□□ -1.85
TMEM259Q4ZIN3 RNU6-412P-201ENST00000516434 106 ntBASIC3.49□□□□□ -1.85
TMEM259Q4ZIN3 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.49□□□□□ -1.85
TMEM259Q4ZIN3 AC069114.2-201ENST00000604699 304 ntBASIC3.49□□□□□ -1.85
TMEM259Q4ZIN3 SNORA28-201ENST00000606769 126 ntBASIC3.49□□□□□ -1.85
TMEM259Q4ZIN3 AC022513.1-201ENST00000624512 117 ntBASIC3.49□□□□□ -1.85
TMEM259Q4ZIN3 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
TMEM259Q4ZIN3 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TMEM259Q4ZIN3 AL356274.2-201ENST00000624379 3752 ntBASIC3.49□□□□□ -1.85
TMEM259Q4ZIN3 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TMEM259Q4ZIN3 AC068647.1-201ENST00000489539 2265 ntBASIC3.48□□□□□ -1.85
TMEM259Q4ZIN3 RNA5SP383-201ENST00000362934 120 ntBASIC3.48□□□□□ -1.85
TMEM259Q4ZIN3 RNU6-1019P-201ENST00000364424 107 ntBASIC3.48□□□□□ -1.85
TMEM259Q4ZIN3 RNU2-27P-201ENST00000516185 142 ntBASIC3.48□□□□□ -1.85
TMEM259Q4ZIN3 SNORD36C-201ENST00000516733 66 ntBASIC3.48□□□□□ -1.85
TMEM259Q4ZIN3 SNORA18.7-201ENST00000516910 131 ntBASIC3.48□□□□□ -1.85
TMEM259Q4ZIN3 RNU6-537P-201ENST00000517277 103 ntBASIC3.48□□□□□ -1.85
TMEM259Q4ZIN3 MIR5094-201ENST00000578766 85 ntBASIC3.48□□□□□ -1.85
TMEM259Q4ZIN3 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
TMEM259Q4ZIN3 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
TMEM259Q4ZIN3 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.47□□□□□ -1.85
TMEM259Q4ZIN3 RNU6-690P-201ENST00000365242 106 ntBASIC3.47□□□□□ -1.85
TMEM259Q4ZIN3 RNU11-3P-201ENST00000391111 133 ntBASIC3.47□□□□□ -1.85
TMEM259Q4ZIN3 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC3.47□□□□□ -1.85
TMEM259Q4ZIN3 RPS26P48-201ENST00000491713 339 ntBASIC3.47□□□□□ -1.85
TMEM259Q4ZIN3 AC114811.1-201ENST00000507207 168 ntBASIC3.47□□□□□ -1.85
TMEM259Q4ZIN3 AC007012.1-201ENST00000567192 175 ntBASIC3.47□□□□□ -1.85
TMEM259Q4ZIN3 AC005000.2-201ENST00000605468 310 ntBASIC3.47□□□□□ -1.85
TMEM259Q4ZIN3 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
TMEM259Q4ZIN3 MIR570-201ENST00000384917 97 ntBASIC3.46□□□□□ -1.86
TMEM259Q4ZIN3 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms