| MUC3A | Q02505 | snoR1.1-201 | ENST00000628177 | 80 nt | BASIC | -1.94 | □□□□□ -2.72 | | |
| MUC3A | Q02505 | PMCH-201 | ENST00000329406 | 766 nt | APPRIS P1 TSL 1 (best) BASIC | -1.95 | □□□□□ -2.72 | | |
| MUC3A | Q02505 | SNORA33-201 | ENST00000363664 | 130 nt | BASIC | -1.95 | □□□□□ -2.72 | | |
| MUC3A | Q02505 | SNRPGP10-201 | ENST00000432323 | 225 nt | BASIC | -1.95 | □□□□□ -2.72 | | |
| MUC3A | Q02505 | Y_RNA.830-201 | ENST00000628531 | 96 nt | BASIC | -1.95 | □□□□□ -2.72 | | |
| MUC3A | Q02505 | RNU6-509P-201 | ENST00000363519 | 107 nt | BASIC | -1.95 | □□□□□ -2.72 | | |
| MUC3A | Q02505 | RNU6-701P-201 | ENST00000384059 | 107 nt | BASIC | -1.95 | □□□□□ -2.72 | | |
| MUC3A | Q02505 | RNU6-746P-201 | ENST00000384112 | 109 nt | BASIC | -1.95 | □□□□□ -2.72 | | |
| MUC3A | Q02505 | RNU6-205P-201 | ENST00000390858 | 107 nt | BASIC | -1.95 | □□□□□ -2.72 | | |
| MUC3A | Q02505 | MIR891A-201 | ENST00000401237 | 79 nt | BASIC | -1.95 | □□□□□ -2.72 | | |
| MUC3A | Q02505 | PLCB1-IT1-202 | ENST00000451443 | 251 nt | TSL 3 BASIC | -1.95 | □□□□□ -2.72 | | |
| MUC3A | Q02505 | AC068339.1-201 | ENST00000526965 | 141 nt | BASIC | -1.95 | □□□□□ -2.72 | | |
| MUC3A | Q02505 | AC022893.3-201 | ENST00000607665 | 437 nt | BASIC | -1.95 | □□□□□ -2.72 | | |
| MUC3A | Q02505 | SNX3P1Y-201 | ENST00000615757 | 176 nt | BASIC | -1.95 | □□□□□ -2.72 | | |
| MUC3A | Q02505 | RNU4-10P-201 | ENST00000364383 | 140 nt | BASIC | -1.96 | □□□□□ -2.72 | | |
| MUC3A | Q02505 | RPS29P13-201 | ENST00000402041 | 169 nt | BASIC | -1.96 | □□□□□ -2.72 | | |
| MUC3A | Q02505 | PMCHL1-202 | ENST00000423102 | 261 nt | BASIC | -1.96 | □□□□□ -2.72 | | |
| MUC3A | Q02505 | TIMM9P3-201 | ENST00000428659 | 274 nt | BASIC | -1.96 | □□□□□ -2.72 | | |
| MUC3A | Q02505 | AC013248.1-201 | ENST00000455092 | 232 nt | TSL 3 BASIC | -1.96 | □□□□□ -2.72 | | |
| MUC3A | Q02505 | RNU6-948P-201 | ENST00000516374 | 107 nt | BASIC | -1.96 | □□□□□ -2.72 | | |
| MUC3A | Q02505 | RNU5F-4P-201 | ENST00000516581 | 114 nt | BASIC | -1.96 | □□□□□ -2.72 | | |
| MUC3A | Q02505 | RNU6-90P-201 | ENST00000606352 | 106 nt | BASIC | -1.96 | □□□□□ -2.72 | | |
| MUC3A | Q02505 | SMIM18-202 | ENST00000626298 | 114 nt | TSL 5 BASIC | -1.96 | □□□□□ -2.72 | | |
| MUC3A | Q02505 | SNAPC3-201 | ENST00000380799 | 753 nt | TSL 3 BASIC | -1.96 | □□□□□ -2.72 | | |
| MUC3A | Q02505 | AL359672.1-201 | ENST00000442302 | 409 nt | BASIC | -1.96 | □□□□□ -2.72 | | |
| MUC3A | Q02505 | U6.114-201 | ENST00000636407 | 96 nt | BASIC | -1.96 | □□□□□ -2.72 | | |
| MUC3A | Q02505 | AC020891.3-201 | ENST00000560011 | 363 nt | TSL 3 BASIC | -1.96 | □□□□□ -2.72 | | |
| MUC3A | Q02505 | RNU6-441P-201 | ENST00000384545 | 106 nt | BASIC | -1.97 | □□□□□ -2.72 | | |
| MUC3A | Q02505 | RNU6-1300P-201 | ENST00000391046 | 108 nt | BASIC | -1.97 | □□□□□ -2.72 | | |
| MUC3A | Q02505 | RNU6-168P-201 | ENST00000516189 | 101 nt | BASIC | -1.97 | □□□□□ -2.72 | | |
| MUC3A | Q02505 | RNU6-323P-201 | ENST00000521915 | 107 nt | BASIC | -1.97 | □□□□□ -2.72 | | |
| MUC3A | Q02505 | AC073648.5-201 | ENST00000603502 | 305 nt | BASIC | -1.97 | □□□□□ -2.72 | | |
| MUC3A | Q02505 | AC099785.1-201 | ENST00000605697 | 437 nt | BASIC | -1.97 | □□□□□ -2.72 | | |
| MUC3A | Q02505 | AC080013.3-201 | ENST00000606839 | 578 nt | BASIC | -1.97 | □□□□□ -2.72 | | |
| MUC3A | Q02505 | SEPT14P19-202 | ENST00000632397 | 370 nt | TSL 3 BASIC | -1.97 | □□□□□ -2.72 | | |
| MUC3A | Q02505 | IL2-201 | ENST00000226730 | 1029 nt | APPRIS P1 TSL 1 (best) BASIC | -1.97 | □□□□□ -2.72 | | |
| MUC3A | Q02505 | SNORD115-15-201 | ENST00000364809 | 81 nt | BASIC | -1.97 | □□□□□ -2.72 | | |
| MUC3A | Q02505 | Y_RNA.372-201 | ENST00000365599 | 102 nt | BASIC | -1.97 | □□□□□ -2.72 | | |
| MUC3A | Q02505 | MIR649-201 | ENST00000384843 | 97 nt | BASIC | -1.97 | □□□□□ -2.72 | | |
| MUC3A | Q02505 | AC003985.1-201 | ENST00000414127 | 362 nt | TSL 3 BASIC | -1.97 | □□□□□ -2.72 | | |
| MUC3A | Q02505 | BTF3L4P3-201 | ENST00000418879 | 476 nt | BASIC | -1.97 | □□□□□ -2.72 | | |
| MUC3A | Q02505 | RNU2-11P-201 | ENST00000459191 | 187 nt | BASIC | -1.97 | □□□□□ -2.72 | | |
| MUC3A | Q02505 | Y_RNA.721-201 | ENST00000517207 | 102 nt | BASIC | -1.97 | □□□□□ -2.72 | | |
| MUC3A | Q02505 | Y_RNA.162-201 | ENST00000363683 | 102 nt | BASIC | -1.97 | □□□□□ -2.73 | | |
| MUC3A | Q02505 | AL451054.2-201 | ENST00000420896 | 202 nt | BASIC | -1.97 | □□□□□ -2.73 | | |
| MUC3A | Q02505 | HMGN3P1-201 | ENST00000453847 | 193 nt | BASIC | -1.97 | □□□□□ -2.73 | | |
| MUC3A | Q02505 | RNU6-397P-201 | ENST00000516226 | 104 nt | BASIC | -1.97 | □□□□□ -2.73 | | |
| MUC3A | Q02505 | RNU1-141P-201 | ENST00000364623 | 158 nt | BASIC | -1.98 | □□□□□ -2.73 | | |
| MUC3A | Q02505 | SNORA59B-202 | ENST00000578183 | 701 nt | BASIC | -1.98 | □□□□□ -2.73 | | |
| MUC3A | Q02505 | Y_RNA.42-201 | ENST00000362660 | 108 nt | BASIC | -1.98 | □□□□□ -2.73 | | |
| MUC3A | Q02505 | AC005771.1-201 | ENST00000585581 | 349 nt | BASIC | -1.98 | □□□□□ -2.73 | | |
| MUC3A | Q02505 | Y_RNA.59-201 | ENST00000362828 | 102 nt | BASIC | -1.99 | □□□□□ -2.73 | | |
| MUC3A | Q02505 | RNU6-1246P-201 | ENST00000391064 | 107 nt | BASIC | -1.99 | □□□□□ -2.73 | | |
| MUC3A | Q02505 | AC245047.3-201 | ENST00000429428 | 127 nt | BASIC | -1.99 | □□□□□ -2.73 | | |
| MUC3A | Q02505 | HTN3-205 | ENST00000530128 | 775 nt | APPRIS P2 TSL 2 BASIC | -1.99 | □□□□□ -2.73 | | |
| MUC3A | Q02505 | AL356055.1-201 | ENST00000602528 | 446 nt | BASIC | -1.99 | □□□□□ -2.73 | | |
| MUC3A | Q02505 | MIR8066-201 | ENST00000617280 | 78 nt | BASIC | -1.99 | □□□□□ -2.73 | | |
| MUC3A | Q02505 | RNU6-424P-201 | ENST00000384367 | 105 nt | BASIC | -1.99 | □□□□□ -2.73 | | |
| MUC3A | Q02505 | SEPT14P24-201 | ENST00000447236 | 180 nt | BASIC | -1.99 | □□□□□ -2.73 | | |
| MUC3A | Q02505 | AC104629.2-201 | ENST00000468627 | 598 nt | BASIC | -1.99 | □□□□□ -2.73 | | |
| MUC3A | Q02505 | SEPT14P4-201 | ENST00000513445 | 186 nt | BASIC | -1.99 | □□□□□ -2.73 | | |
| MUC3A | Q02505 | MIR3123-201 | ENST00000583417 | 75 nt | BASIC | -1.99 | □□□□□ -2.73 | | |
| MUC3A | Q02505 | SNORA28-201 | ENST00000606769 | 126 nt | BASIC | -1.99 | □□□□□ -2.73 | | |
| MUC3A | Q02505 | SNORD68-201 | ENST00000363214 | 84 nt | BASIC | -1.99 | □□□□□ -2.73 | | |
| MUC3A | Q02505 | HIGD1AP15-201 | ENST00000416198 | 280 nt | BASIC | -1.99 | □□□□□ -2.73 | | |
| MUC3A | Q02505 | AC027544.2-201 | ENST00000539313 | 630 nt | TSL 5 BASIC | -1.99 | □□□□□ -2.73 | | |
| MUC3A | Q02505 | Y_RNA.781-201 | ENST00000620301 | 103 nt | BASIC | -1.99 | □□□□□ -2.73 | | |
| MUC3A | Q02505 | Z97988.1-201 | ENST00000637697 | 135 nt | BASIC | -1.99 | □□□□□ -2.73 | | |
| MUC3A | Q02505 | SGO1P1-201 | ENST00000603525 | 1447 nt | BASIC | -2 | □□□□□ -2.73 | | |
| MUC3A | Q02505 | Y_RNA.91-201 | ENST00000363042 | 107 nt | BASIC | -2 | □□□□□ -2.73 | | |
| MUC3A | Q02505 | RNU6-658P-201 | ENST00000384606 | 106 nt | BASIC | -2 | □□□□□ -2.73 | | |
| MUC3A | Q02505 | PIGP-205 | ENST00000399103 | 656 nt | APPRIS P1 TSL 1 (best) BASIC | -2 | □□□□□ -2.73 | | |
| MUC3A | Q02505 | AC013262.1-201 | ENST00000426710 | 252 nt | BASIC | -2 | □□□□□ -2.73 | | |
| MUC3A | Q02505 | FGF7P6-202 | ENST00000451282 | 293 nt | BASIC | -2 | □□□□□ -2.73 | | |
| MUC3A | Q02505 | LINC00301-204 | ENST00000532591 | 470 nt | TSL 2 BASIC | -2 | □□□□□ -2.73 | | |
| MUC3A | Q02505 | MIR4264-201 | ENST00000583520 | 66 nt | BASIC | -2 | □□□□□ -2.73 | | |
| MUC3A | Q02505 | AC078795.2-201 | ENST00000602835 | 1252 nt | BASIC | -2 | □□□□□ -2.73 | | |
| MUC3A | Q02505 | RPL17P51-201 | ENST00000605218 | 238 nt | BASIC | -2 | □□□□□ -2.73 | | |
| MUC3A | Q02505 | SNORD115-23-201 | ENST00000364461 | 82 nt | BASIC | -2 | □□□□□ -2.73 | | |
| MUC3A | Q02505 | AC079781.2-201 | ENST00000446424 | 169 nt | BASIC | -2 | □□□□□ -2.73 | | |
| MUC3A | Q02505 | MIR5693-201 | ENST00000577722 | 73 nt | BASIC | -2 | □□□□□ -2.73 | | |
| MUC3A | Q02505 | PART1_1.1-201 | ENST00000611761 | 217 nt | BASIC | -2 | □□□□□ -2.73 | | |
| MUC3A | Q02505 | AC092656.1-203 | ENST00000624134 | 423 nt | BASIC | -2 | □□□□□ -2.73 | | |
| MUC3A | Q02505 | AL163152.1-201 | ENST00000642001 | 374 nt | BASIC | -2 | □□□□□ -2.73 | | |
| MUC3A | Q02505 | RNU6-440P-201 | ENST00000390882 | 105 nt | BASIC | -2.01 | □□□□□ -2.73 | | |
| MUC3A | Q02505 | SNORA12.2-201 | ENST00000391040 | 156 nt | BASIC | -2.01 | □□□□□ -2.73 | | |
| MUC3A | Q02505 | RNU6-695P-201 | ENST00000391157 | 104 nt | BASIC | -2.01 | □□□□□ -2.73 | | |
| MUC3A | Q02505 | AL080248.1-201 | ENST00000428954 | 388 nt | TSL 3 BASIC | -2.01 | □□□□□ -2.73 | | |
| MUC3A | Q02505 | RNU2-10P-201 | ENST00000516375 | 211 nt | BASIC | -2.01 | □□□□□ -2.73 | | |
| MUC3A | Q02505 | AC093783.1-201 | ENST00000612976 | 329 nt | BASIC | -2.01 | □□□□□ -2.73 | | |
| MUC3A | Q02505 | MIR20A-201 | ENST00000362279 | 71 nt | BASIC | -2.01 | □□□□□ -2.73 | | |
| MUC3A | Q02505 | RNU6-926P-201 | ENST00000384075 | 107 nt | BASIC | -2.01 | □□□□□ -2.73 | | |
| MUC3A | Q02505 | RNU2-54P-201 | ENST00000410299 | 190 nt | BASIC | -2.01 | □□□□□ -2.73 | | |
| MUC3A | Q02505 | MIR4473-201 | ENST00000583731 | 91 nt | BASIC | -2.01 | □□□□□ -2.73 | | |
| MUC3A | Q02505 | Y_RNA.8-201 | ENST00000362353 | 102 nt | BASIC | -2.01 | □□□□□ -2.73 | | |
| MUC3A | Q02505 | RNU6-697P-201 | ENST00000363348 | 107 nt | BASIC | -2.01 | □□□□□ -2.73 | | |
| MUC3A | Q02505 | RNU6-512P-201 | ENST00000364438 | 103 nt | BASIC | -2.01 | □□□□□ -2.73 | | |
| MUC3A | Q02505 | RNU6-1138P-201 | ENST00000365359 | 106 nt | BASIC | -2.01 | □□□□□ -2.73 | | |
| MUC3A | Q02505 | LINC02095-202 | ENST00000543512 | 323 nt | TSL 3 BASIC | -2.01 | □□□□□ -2.73 | | |
| MUC3A | Q02505 | 5S_rRNA.15-201 | ENST00000611169 | 127 nt | BASIC | -2.01 | □□□□□ -2.73 | | |