Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AC087343.1-201ENST00000477341 475 ntBASIC1.34□□□□□ -2.19
HMGCS2P54868 Y_RNA.715-201ENST00000517082 110 ntBASIC1.34□□□□□ -2.19
HMGCS2P54868 RNU7-172P-201ENST00000517125 64 ntBASIC1.34□□□□□ -2.19
HMGCS2P54868 AC022616.4-201ENST00000522985 181 ntBASIC1.34□□□□□ -2.19
HMGCS2P54868 AC136932.1-201ENST00000574771 208 ntBASIC1.34□□□□□ -2.19
HMGCS2P54868 AC124312.5-201ENST00000604451 268 ntBASIC1.34□□□□□ -2.19
HMGCS2P54868 Y_RNA.772-201ENST00000606692 102 ntBASIC1.34□□□□□ -2.19
HMGCS2P54868 AC022709.1-201ENST00000615967 87 ntBASIC1.34□□□□□ -2.19
HMGCS2P54868 AC095038.3-201ENST00000634439 195 ntBASIC1.34□□□□□ -2.19
HMGCS2P54868 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.2
HMGCS2P54868 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.34□□□□□ -2.2
HMGCS2P54868 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
HMGCS2P54868 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
HMGCS2P54868 Y_RNA.143-201ENST00000363520 106 ntBASIC1.33□□□□□ -2.2
HMGCS2P54868 RNY1-201ENST00000364228 113 ntBASIC1.33□□□□□ -2.2
HMGCS2P54868 Y_RNA.424-201ENST00000384063 103 ntBASIC1.33□□□□□ -2.2
HMGCS2P54868 SNORD63-201ENST00000384262 68 ntBASIC1.33□□□□□ -2.2
HMGCS2P54868 RNU6-937P-201ENST00000384325 106 ntBASIC1.33□□□□□ -2.2
HMGCS2P54868 Y_RNA.551-201ENST00000384661 102 ntBASIC1.33□□□□□ -2.2
HMGCS2P54868 RNU2-61P-201ENST00000411069 191 ntBASIC1.33□□□□□ -2.2
HMGCS2P54868 AC005534.2-201ENST00000431047 433 ntBASIC1.33□□□□□ -2.2
HMGCS2P54868 FTH1P12-201ENST00000432137 551 ntBASIC1.33□□□□□ -2.2
HMGCS2P54868 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.33□□□□□ -2.2
HMGCS2P54868 RNU6-155P-201ENST00000516347 100 ntBASIC1.33□□□□□ -2.2
HMGCS2P54868 RNU6-1046P-201ENST00000516538 107 ntBASIC1.33□□□□□ -2.2
HMGCS2P54868 SNORA77B-201ENST00000578179 125 ntBASIC1.33□□□□□ -2.2
HMGCS2P54868 MIR4680-201ENST00000580906 66 ntBASIC1.33□□□□□ -2.2
HMGCS2P54868 AL356055.1-201ENST00000602528 446 ntBASIC1.33□□□□□ -2.2
HMGCS2P54868 AP001485.1-201ENST00000604799 199 ntBASIC1.33□□□□□ -2.2
HMGCS2P54868 RAC1P9-201ENST00000604990 392 ntBASIC1.33□□□□□ -2.2
HMGCS2P54868 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.33□□□□□ -2.2
HMGCS2P54868 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.33□□□□□ -2.2
HMGCS2P54868 AC022140.2-201ENST00000623500 188 ntBASIC1.33□□□□□ -2.2
HMGCS2P54868 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
HMGCS2P54868 AL161722.3-201ENST00000605789 2983 ntBASIC1.32□□□□□ -2.2
HMGCS2P54868 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
HMGCS2P54868 Y_RNA.158-201ENST00000363651 101 ntBASIC1.32□□□□□ -2.2
HMGCS2P54868 Y_RNA.172-201ENST00000363765 102 ntBASIC1.32□□□□□ -2.2
HMGCS2P54868 RNU6-271P-201ENST00000363858 105 ntBASIC1.32□□□□□ -2.2
HMGCS2P54868 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.32□□□□□ -2.2
HMGCS2P54868 Y_RNA.439-201ENST00000384119 94 ntBASIC1.32□□□□□ -2.2
HMGCS2P54868 MIR222-201ENST00000384992 110 ntBASIC1.32□□□□□ -2.2
HMGCS2P54868 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
HMGCS2P54868 RNU1-78P-201ENST00000391248 165 ntBASIC1.32□□□□□ -2.2
HMGCS2P54868 MIR1252-201ENST00000408861 65 ntBASIC1.32□□□□□ -2.2
HMGCS2P54868 RNU2-7P-201ENST00000410794 178 ntBASIC1.32□□□□□ -2.2
HMGCS2P54868 RNU5A-5P-201ENST00000411054 116 ntBASIC1.32□□□□□ -2.2
HMGCS2P54868 AL161935.2-201ENST00000414627 60 ntBASIC1.32□□□□□ -2.2
HMGCS2P54868 HSPE1P24-201ENST00000450782 238 ntBASIC1.32□□□□□ -2.2
HMGCS2P54868 SUMO1P2-201ENST00000452524 304 ntBASIC1.32□□□□□ -2.2
HMGCS2P54868 AC005908.1-201ENST00000468701 347 ntBASIC1.32□□□□□ -2.2
HMGCS2P54868 RNU6-63P-201ENST00000516690 95 ntBASIC1.32□□□□□ -2.2
HMGCS2P54868 AC090821.2-201ENST00000523552 176 ntBASIC1.32□□□□□ -2.2
HMGCS2P54868 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.32□□□□□ -2.2
HMGCS2P54868 AC091178.2-201ENST00000584401 117 ntBASIC1.32□□□□□ -2.2
HMGCS2P54868 AC018630.2-201ENST00000534866 2403 ntBASIC1.32□□□□□ -2.2
HMGCS2P54868 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.32□□□□□ -2.2
HMGCS2P54868 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
HMGCS2P54868 SNORA33.2-201ENST00000365413 134 ntBASIC1.31□□□□□ -2.2
HMGCS2P54868 Y_RNA.389-201ENST00000383924 113 ntBASIC1.31□□□□□ -2.2
HMGCS2P54868 RNU6-505P-201ENST00000384427 107 ntBASIC1.31□□□□□ -2.2
HMGCS2P54868 MIR194-1-201ENST00000384892 85 ntBASIC1.31□□□□□ -2.2
HMGCS2P54868 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.31□□□□□ -2.2
HMGCS2P54868 AC010154.1-201ENST00000425857 269 ntBASIC1.31□□□□□ -2.2
HMGCS2P54868 snoU13.27-201ENST00000459278 104 ntBASIC1.31□□□□□ -2.2
HMGCS2P54868 AC099513.1-201ENST00000490423 301 ntBASIC1.31□□□□□ -2.2
HMGCS2P54868 RNU6-1337P-201ENST00000516525 95 ntBASIC1.31□□□□□ -2.2
HMGCS2P54868 RNA5SP481-201ENST00000516814 122 ntBASIC1.31□□□□□ -2.2
HMGCS2P54868 RNU6-897P-201ENST00000517135 105 ntBASIC1.31□□□□□ -2.2
HMGCS2P54868 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.31□□□□□ -2.2
HMGCS2P54868 AL929325.1-201ENST00000603096 117 ntBASIC1.31□□□□□ -2.2
HMGCS2P54868 AC006380.1-201ENST00000603598 186 ntBASIC1.31□□□□□ -2.2
HMGCS2P54868 AC040896.1-201ENST00000613819 479 ntBASIC1.31□□□□□ -2.2
HMGCS2P54868 MIR8054-201ENST00000620877 86 ntBASIC1.31□□□□□ -2.2
HMGCS2P54868 AC127459.3-201ENST00000624328 466 ntBASIC1.31□□□□□ -2.2
HMGCS2P54868 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.3□□□□□ -2.2
HMGCS2P54868 Y_RNA.105-201ENST00000363182 111 ntBASIC1.3□□□□□ -2.2
HMGCS2P54868 RNU6-694P-201ENST00000364071 147 ntBASIC1.3□□□□□ -2.2
HMGCS2P54868 Y_RNA.202-201ENST00000364083 110 ntBASIC1.3□□□□□ -2.2
HMGCS2P54868 Y_RNA.286-201ENST00000364813 102 ntBASIC1.3□□□□□ -2.2
HMGCS2P54868 Y_RNA.329-201ENST00000365209 107 ntBASIC1.3□□□□□ -2.2
HMGCS2P54868 Y_RNA.527-201ENST00000384573 102 ntBASIC1.3□□□□□ -2.2
HMGCS2P54868 Y_RNA.540-201ENST00000384638 111 ntBASIC1.3□□□□□ -2.2
HMGCS2P54868 RNU4-30P-201ENST00000410245 143 ntBASIC1.3□□□□□ -2.2
HMGCS2P54868 RNU6-121P-201ENST00000410525 99 ntBASIC1.3□□□□□ -2.2
HMGCS2P54868 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.3□□□□□ -2.2
HMGCS2P54868 AC245047.3-201ENST00000429428 127 ntBASIC1.3□□□□□ -2.2
HMGCS2P54868 RPS29P23-201ENST00000458635 123 ntBASIC1.3□□□□□ -2.2
HMGCS2P54868 AC091021.1-201ENST00000468051 388 ntBASIC1.3□□□□□ -2.2
HMGCS2P54868 RNU6-397P-201ENST00000516226 104 ntBASIC1.3□□□□□ -2.2
HMGCS2P54868 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
HMGCS2P54868 AC113195.1-201ENST00000579952 141 ntBASIC1.3□□□□□ -2.2
HMGCS2P54868 MIR6079-201ENST00000635807 62 ntBASIC1.3□□□□□ -2.2
HMGCS2P54868 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
HMGCS2P54868 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
HMGCS2P54868 SNORA63.7-201ENST00000365579 123 ntBASIC1.29□□□□□ -2.2
HMGCS2P54868 Y_RNA.455-201ENST00000384230 98 ntBASIC1.29□□□□□ -2.2
HMGCS2P54868 SNORD116-13-201ENST00000384408 92 ntBASIC1.29□□□□□ -2.2
HMGCS2P54868 RNU6-136P-201ENST00000384663 107 ntBASIC1.29□□□□□ -2.2
HMGCS2P54868 RNU6-440P-201ENST00000390882 105 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms