Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.1□□□□□ -2.07
HOXA11P31270 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.1□□□□□ -2.07
HOXA11P31270 AC093259.1-201ENST00000509755 300 ntBASIC2.1□□□□□ -2.07
HOXA11P31270 RNU6-861P-201ENST00000516745 106 ntBASIC2.1□□□□□ -2.07
HOXA11P31270 AC025647.1-201ENST00000517879 253 ntBASIC2.1□□□□□ -2.07
HOXA11P31270 AC087441.2-201ENST00000529141 262 ntBASIC2.1□□□□□ -2.07
HOXA11P31270 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.1□□□□□ -2.07
HOXA11P31270 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.1□□□□□ -2.07
HOXA11P31270 AC068700.1-201ENST00000565862 3754 ntBASIC2.1□□□□□ -2.07
HOXA11P31270 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.09□□□□□ -2.07
HOXA11P31270 Y_RNA.287-201ENST00000364853 94 ntBASIC2.09□□□□□ -2.07
HOXA11P31270 RNU6-746P-201ENST00000384112 109 ntBASIC2.09□□□□□ -2.07
HOXA11P31270 Y_RNA.441-201ENST00000384123 112 ntBASIC2.09□□□□□ -2.07
HOXA11P31270 SNORA20B-201ENST00000384220 132 ntBASIC2.09□□□□□ -2.07
HOXA11P31270 MIR583-201ENST00000384846 75 ntBASIC2.09□□□□□ -2.07
HOXA11P31270 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.09□□□□□ -2.07
HOXA11P31270 AL357139.1-201ENST00000407792 426 ntBASIC2.09□□□□□ -2.07
HOXA11P31270 RNU2-32P-201ENST00000411193 191 ntBASIC2.09□□□□□ -2.07
HOXA11P31270 RNA5SP450-201ENST00000411206 102 ntBASIC2.09□□□□□ -2.07
HOXA11P31270 AL158823.1-201ENST00000418441 478 ntBASIC2.09□□□□□ -2.07
HOXA11P31270 HMGN2P38-201ENST00000423806 265 ntBASIC2.09□□□□□ -2.07
HOXA11P31270 HMGN2P19-201ENST00000425149 265 ntBASIC2.09□□□□□ -2.07
HOXA11P31270 HMGN2P18-201ENST00000450680 270 ntBASIC2.09□□□□□ -2.07
HOXA11P31270 U8.19-201ENST00000459095 133 ntBASIC2.09□□□□□ -2.07
HOXA11P31270 SNORD65B-201ENST00000459126 73 ntBASIC2.09□□□□□ -2.07
HOXA11P31270 AL096840.1-201ENST00000603287 93 ntBASIC2.09□□□□□ -2.07
HOXA11P31270 AC134026.1-201ENST00000623249 2239 ntBASIC2.09□□□□□ -2.08
HOXA11P31270 MIR340-201ENST00000362125 95 ntBASIC2.08□□□□□ -2.08
HOXA11P31270 RNU6-271P-201ENST00000363858 105 ntBASIC2.08□□□□□ -2.08
HOXA11P31270 RNU6-899P-201ENST00000363947 107 ntBASIC2.08□□□□□ -2.08
HOXA11P31270 Y_RNA.308-201ENST00000365043 101 ntBASIC2.08□□□□□ -2.08
HOXA11P31270 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
HOXA11P31270 AC016909.1-201ENST00000415916 166 ntBASIC2.08□□□□□ -2.08
HOXA11P31270 AC003989.2-201ENST00000440224 169 ntBASIC2.08□□□□□ -2.08
HOXA11P31270 AC010531.2-201ENST00000465012 153 ntBASIC2.08□□□□□ -2.08
HOXA11P31270 RPS26P55-201ENST00000471178 356 ntBASIC2.08□□□□□ -2.08
HOXA11P31270 RNY3P16-201ENST00000516338 101 ntBASIC2.08□□□□□ -2.08
HOXA11P31270 AC022559.1-201ENST00000520905 205 ntBASIC2.08□□□□□ -2.08
HOXA11P31270 MRPS18CP4-201ENST00000535821 231 ntBASIC2.08□□□□□ -2.08
HOXA11P31270 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.07□□□□□ -2.08
HOXA11P31270 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
HOXA11P31270 RNA5SP99-201ENST00000364020 114 ntBASIC2.07□□□□□ -2.08
HOXA11P31270 Y_RNA.341-201ENST00000365341 102 ntBASIC2.07□□□□□ -2.08
HOXA11P31270 MIR526A2-201ENST00000390198 65 ntBASIC2.07□□□□□ -2.08
HOXA11P31270 RNU6-381P-201ENST00000391259 108 ntBASIC2.07□□□□□ -2.08
HOXA11P31270 MIR548M-201ENST00000408260 86 ntBASIC2.07□□□□□ -2.08
HOXA11P31270 RNU6-394P-201ENST00000410735 107 ntBASIC2.07□□□□□ -2.08
HOXA11P31270 AC123900.1-201ENST00000420390 96 ntBASIC2.07□□□□□ -2.08
HOXA11P31270 AC008134.1-201ENST00000420943 193 ntBASIC2.07□□□□□ -2.08
HOXA11P31270 AC090255.1-201ENST00000495779 349 ntBASIC2.07□□□□□ -2.08
HOXA11P31270 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.07□□□□□ -2.08
HOXA11P31270 Y_RNA.662-201ENST00000516028 97 ntBASIC2.07□□□□□ -2.08
HOXA11P31270 RNU6-255P-201ENST00000516957 105 ntBASIC2.07□□□□□ -2.08
HOXA11P31270 MIR4299-201ENST00000577899 72 ntBASIC2.07□□□□□ -2.08
HOXA11P31270 AC108706.1-201ENST00000611053 297 ntBASIC2.07□□□□□ -2.08
HOXA11P31270 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
HOXA11P31270 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
HOXA11P31270 Y_RNA.7-201ENST00000362352 102 ntBASIC2.06□□□□□ -2.08
HOXA11P31270 Y_RNA.75-201ENST00000362927 97 ntBASIC2.06□□□□□ -2.08
HOXA11P31270 SNORD115-3-201ENST00000363100 82 ntBASIC2.06□□□□□ -2.08
HOXA11P31270 Y_RNA.124-201ENST00000363339 93 ntBASIC2.06□□□□□ -2.08
HOXA11P31270 RNU6-923P-201ENST00000364753 107 ntBASIC2.06□□□□□ -2.08
HOXA11P31270 RNU6-117P-201ENST00000365415 107 ntBASIC2.06□□□□□ -2.08
HOXA11P31270 RNU4-17P-201ENST00000365598 141 ntBASIC2.06□□□□□ -2.08
HOXA11P31270 RNY1P5-201ENST00000383890 115 ntBASIC2.06□□□□□ -2.08
HOXA11P31270 RNU6-144P-201ENST00000383951 107 ntBASIC2.06□□□□□ -2.08
HOXA11P31270 RNU6-1323P-201ENST00000384025 107 ntBASIC2.06□□□□□ -2.08
HOXA11P31270 Y_RNA.571-201ENST00000384753 98 ntBASIC2.06□□□□□ -2.08
HOXA11P31270 MIR626-201ENST00000385032 94 ntBASIC2.06□□□□□ -2.08
HOXA11P31270 RNU6-855P-201ENST00000410395 104 ntBASIC2.06□□□□□ -2.08
HOXA11P31270 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.06□□□□□ -2.08
HOXA11P31270 RPS20P10-201ENST00000451209 253 ntBASIC2.06□□□□□ -2.08
HOXA11P31270 AC074198.2-201ENST00000508153 258 ntBASIC2.06□□□□□ -2.08
HOXA11P31270 RNU6-406P-201ENST00000516470 107 ntBASIC2.06□□□□□ -2.08
HOXA11P31270 RNU6-856P-201ENST00000516959 98 ntBASIC2.06□□□□□ -2.08
HOXA11P31270 RNA5SP490-201ENST00000517141 136 ntBASIC2.06□□□□□ -2.08
HOXA11P31270 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.06□□□□□ -2.08
HOXA11P31270 RNU6-312P-201ENST00000364629 107 ntBASIC2.05□□□□□ -2.08
HOXA11P31270 RNU6-493P-201ENST00000391321 108 ntBASIC2.05□□□□□ -2.08
HOXA11P31270 RNU6-57P-201ENST00000411348 103 ntBASIC2.05□□□□□ -2.08
HOXA11P31270 AL445685.2-201ENST00000422551 342 ntBASIC2.05□□□□□ -2.08
HOXA11P31270 AC016717.1-201ENST00000448918 286 ntBASIC2.05□□□□□ -2.08
HOXA11P31270 RNU7-141P-201ENST00000459304 62 ntBASIC2.05□□□□□ -2.08
HOXA11P31270 AC005840.1-201ENST00000498412 377 ntBASIC2.05□□□□□ -2.08
HOXA11P31270 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.05□□□□□ -2.08
HOXA11P31270 RNU6-1219P-201ENST00000516143 112 ntBASIC2.05□□□□□ -2.08
HOXA11P31270 RNU6-991P-201ENST00000516168 107 ntBASIC2.05□□□□□ -2.08
HOXA11P31270 RNU6-548P-201ENST00000517083 115 ntBASIC2.05□□□□□ -2.08
HOXA11P31270 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.05□□□□□ -2.08
HOXA11P31270 AL137100.2-201ENST00000555786 315 ntBASIC2.05□□□□□ -2.08
HOXA11P31270 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.05□□□□□ -2.08
HOXA11P31270 AC002984.1-201ENST00000591692 448 ntBASIC2.05□□□□□ -2.08
HOXA11P31270 AP003357.1-201ENST00000604497 148 ntBASIC2.05□□□□□ -2.08
HOXA11P31270 AC004832.4-201ENST00000608952 331 ntBASIC2.05□□□□□ -2.08
HOXA11P31270 CENPCP1-201ENST00000533085 2578 ntBASIC2.05□□□□□ -2.08
HOXA11P31270 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
HOXA11P31270 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.05□□□□□ -2.08
HOXA11P31270 Y_RNA.23-201ENST00000362496 106 ntBASIC2.04□□□□□ -2.08
HOXA11P31270 Y_RNA.172-201ENST00000363765 102 ntBASIC2.04□□□□□ -2.08
HOXA11P31270 RNU6-1048P-201ENST00000364054 107 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms