Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 SNORD14D-201ENST00000384390 87 ntBASIC3.4□□□□□ -1.87
RXRBP28702 MIR1283-1-201ENST00000408494 87 ntBASIC3.4□□□□□ -1.87
RXRBP28702 RNA5SP511-201ENST00000410487 115 ntBASIC3.4□□□□□ -1.87
RXRBP28702 RNU6-221P-201ENST00000459541 99 ntBASIC3.4□□□□□ -1.87
RXRBP28702 AC234781.5-201ENST00000508429 271 ntBASIC3.4□□□□□ -1.87
RXRBP28702 RN7SKP19-201ENST00000516016 252 ntBASIC3.4□□□□□ -1.87
RXRBP28702 RNU6-1299P-201ENST00000516316 100 ntBASIC3.4□□□□□ -1.87
RXRBP28702 RNA5SP281-201ENST00000516504 135 ntBASIC3.4□□□□□ -1.87
RXRBP28702 AC015720.1-201ENST00000565251 277 ntBASIC3.4□□□□□ -1.87
RXRBP28702 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.4□□□□□ -1.87
RXRBP28702 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.4□□□□□ -1.87
RXRBP28702 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RXRBP28702 AC093831.2-201ENST00000624393 3427 ntBASIC3.39□□□□□ -1.87
RXRBP28702 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RXRBP28702 MIR26A1-201ENST00000362205 77 ntBASIC3.39□□□□□ -1.87
RXRBP28702 RNU1-17P-201ENST00000363022 152 ntBASIC3.39□□□□□ -1.87
RXRBP28702 Y_RNA.634-201ENST00000364811 113 ntBASIC3.39□□□□□ -1.87
RXRBP28702 Y_RNA.369-201ENST00000365568 117 ntBASIC3.39□□□□□ -1.87
RXRBP28702 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.39□□□□□ -1.87
RXRBP28702 U6atac.2-201ENST00000408644 118 ntBASIC3.39□□□□□ -1.87
RXRBP28702 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC3.39□□□□□ -1.87
RXRBP28702 RNA5SP20-201ENST00000515976 84 ntBASIC3.39□□□□□ -1.87
RXRBP28702 SNORD77.4-201ENST00000516158 81 ntBASIC3.39□□□□□ -1.87
RXRBP28702 RNU1-143P-201ENST00000516296 146 ntBASIC3.39□□□□□ -1.87
RXRBP28702 RNA5SP153-201ENST00000516498 76 ntBASIC3.39□□□□□ -1.87
RXRBP28702 IGKV1-22-201ENST00000524313 326 ntBASIC3.39□□□□□ -1.87
RXRBP28702 AL929325.1-201ENST00000603096 117 ntBASIC3.39□□□□□ -1.87
RXRBP28702 U1.23-201ENST00000610293 146 ntBASIC3.39□□□□□ -1.87
RXRBP28702 RNU1-68P-201ENST00000615382 146 ntBASIC3.39□□□□□ -1.87
RXRBP28702 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.39□□□□□ -1.87
RXRBP28702 U1.39-201ENST00000621562 146 ntBASIC3.39□□□□□ -1.87
RXRBP28702 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RXRBP28702 MAPK10-266ENST00000641066 6555 ntBASIC3.39□□□□□ -1.87
RXRBP28702 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.38□□□□□ -1.87
RXRBP28702 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3.38□□□□□ -1.87
RXRBP28702 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
RXRBP28702 RNU6-271P-201ENST00000363858 105 ntBASIC3.38□□□□□ -1.87
RXRBP28702 RNU6-647P-201ENST00000364243 107 ntBASIC3.38□□□□□ -1.87
RXRBP28702 RNU6-136P-201ENST00000384663 107 ntBASIC3.38□□□□□ -1.87
RXRBP28702 MIR548A1-201ENST00000385041 97 ntBASIC3.38□□□□□ -1.87
RXRBP28702 EIF4EP4-201ENST00000424916 578 ntBASIC3.38□□□□□ -1.87
RXRBP28702 MIR449C-201ENST00000516047 92 ntBASIC3.38□□□□□ -1.87
RXRBP28702 RNU5F-4P-201ENST00000516581 114 ntBASIC3.38□□□□□ -1.87
RXRBP28702 MIR8070-201ENST00000616510 88 ntBASIC3.38□□□□□ -1.87
RXRBP28702 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RXRBP28702 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RXRBP28702 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
RXRBP28702 AC103988.1-201ENST00000566382 2177 ntBASIC3.38□□□□□ -1.87
RXRBP28702 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RXRBP28702 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.37□□□□□ -1.87
RXRBP28702 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.37□□□□□ -1.87
RXRBP28702 WWP1P1-201ENST00000466609 2769 ntBASIC3.37□□□□□ -1.87
RXRBP28702 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RXRBP28702 RNU6-975P-201ENST00000384296 105 ntBASIC3.37□□□□□ -1.87
RXRBP28702 RNU6-880P-201ENST00000384526 107 ntBASIC3.37□□□□□ -1.87
RXRBP28702 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.37□□□□□ -1.87
RXRBP28702 AC245102.2-201ENST00000448956 180 ntBASIC3.37□□□□□ -1.87
RXRBP28702 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC3.37□□□□□ -1.87
RXRBP28702 SNORD11-201ENST00000459124 84 ntBASIC3.37□□□□□ -1.87
RXRBP28702 snoU13.18-201ENST00000459483 104 ntBASIC3.37□□□□□ -1.87
RXRBP28702 RPL36AP48-201ENST00000485521 314 ntBASIC3.37□□□□□ -1.87
RXRBP28702 AC006483.1-201ENST00000487308 313 ntBASIC3.37□□□□□ -1.87
RXRBP28702 RNU6-844P-201ENST00000517175 102 ntBASIC3.37□□□□□ -1.87
RXRBP28702 AC027419.1-201ENST00000522976 328 ntBASIC3.37□□□□□ -1.87
RXRBP28702 uc_338.28-201ENST00000612082 187 ntBASIC3.37□□□□□ -1.87
RXRBP28702 uc_338.4-201ENST00000616635 176 ntBASIC3.37□□□□□ -1.87
RXRBP28702 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.37□□□□□ -1.87
RXRBP28702 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RXRBP28702 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.37□□□□□ -1.87
RXRBP28702 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
RXRBP28702 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RXRBP28702 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
RXRBP28702 Y_RNA.52-201ENST00000362760 96 ntBASIC3.36□□□□□ -1.87
RXRBP28702 RNU6-32P-201ENST00000383948 107 ntBASIC3.36□□□□□ -1.87
RXRBP28702 RNU6-13P-201ENST00000384248 107 ntBASIC3.36□□□□□ -1.87
RXRBP28702 SNORA72-201ENST00000384339 132 ntBASIC3.36□□□□□ -1.87
RXRBP28702 RNU6-12P-201ENST00000384604 107 ntBASIC3.36□□□□□ -1.87
RXRBP28702 RNU6-41P-201ENST00000384741 107 ntBASIC3.36□□□□□ -1.87
RXRBP28702 SNORA80E-201ENST00000384744 137 ntBASIC3.36□□□□□ -1.87
RXRBP28702 RN7SKP123-201ENST00000410732 291 ntBASIC3.36□□□□□ -1.87
RXRBP28702 AC016717.1-201ENST00000448918 286 ntBASIC3.36□□□□□ -1.87
RXRBP28702 ATP5EP1-201ENST00000510257 156 ntBASIC3.36□□□□□ -1.87
RXRBP28702 RNU6-295P-201ENST00000516901 104 ntBASIC3.36□□□□□ -1.87
RXRBP28702 MIR4506-201ENST00000584693 77 ntBASIC3.36□□□□□ -1.87
RXRBP28702 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC3.36□□□□□ -1.87
RXRBP28702 AL121890.5-201ENST00000620848 304 ntBASIC3.36□□□□□ -1.87
RXRBP28702 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
RXRBP28702 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RXRBP28702 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RXRBP28702 RNU6-106P-201ENST00000384405 107 ntBASIC3.35□□□□□ -1.87
RXRBP28702 SNORA26.9-201ENST00000391322 122 ntBASIC3.35□□□□□ -1.87
RXRBP28702 MIR300-201ENST00000401138 83 ntBASIC3.35□□□□□ -1.87
RXRBP28702 MIR891A-201ENST00000401237 79 ntBASIC3.35□□□□□ -1.87
RXRBP28702 AL359511.1-201ENST00000402970 211 ntBASIC3.35□□□□□ -1.87
RXRBP28702 AC016909.1-201ENST00000415916 166 ntBASIC3.35□□□□□ -1.87
RXRBP28702 Y_RNA.649-201ENST00000459077 103 ntBASIC3.35□□□□□ -1.87
RXRBP28702 RNU7-14P-201ENST00000459331 62 ntBASIC3.35□□□□□ -1.87
RXRBP28702 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.35□□□□□ -1.87
RXRBP28702 snoU13.31-201ENST00000607291 104 ntBASIC3.35□□□□□ -1.87
RXRBP28702 MIR6873-201ENST00000622788 63 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 131.3 ms