Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 Y_RNA.222-201ENST00000364264 102 ntBASIC1.5□□□□□ -2.17
CDH3P22223 RNU6-136P-201ENST00000384663 107 ntBASIC1.5□□□□□ -2.17
CDH3P22223 MIR194-1-201ENST00000384892 85 ntBASIC1.5□□□□□ -2.17
CDH3P22223 MIR517C-201ENST00000385103 95 ntBASIC1.5□□□□□ -2.17
CDH3P22223 AL161935.2-201ENST00000414627 60 ntBASIC1.5□□□□□ -2.17
CDH3P22223 AL162725.1-201ENST00000435405 301 ntBASIC1.5□□□□□ -2.17
CDH3P22223 AL603825.1-201ENST00000438481 80 ntBASIC1.5□□□□□ -2.17
CDH3P22223 LINC01399-202ENST00000458450 244 ntBASIC1.5□□□□□ -2.17
CDH3P22223 SEPT14P8-201ENST00000508026 178 ntBASIC1.5□□□□□ -2.17
CDH3P22223 RNU6-496P-201ENST00000516145 99 ntBASIC1.5□□□□□ -2.17
CDH3P22223 RNU6-1291P-201ENST00000516591 104 ntBASIC1.5□□□□□ -2.17
CDH3P22223 RNU6-341P-201ENST00000516973 96 ntBASIC1.5□□□□□ -2.17
CDH3P22223 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.5□□□□□ -2.17
CDH3P22223 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.5□□□□□ -2.17
CDH3P22223 AC004832.4-201ENST00000608952 331 ntBASIC1.5□□□□□ -2.17
CDH3P22223 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.5□□□□□ -2.17
CDH3P22223 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.5□□□□□ -2.17
CDH3P22223 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
CDH3P22223 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
CDH3P22223 MIR378A-201ENST00000362177 66 ntBASIC1.49□□□□□ -2.17
CDH3P22223 SNORA63-201ENST00000363450 132 ntBASIC1.49□□□□□ -2.17
CDH3P22223 Y_RNA.267-201ENST00000364679 109 ntBASIC1.49□□□□□ -2.17
CDH3P22223 RNU6-60P-201ENST00000364792 103 ntBASIC1.49□□□□□ -2.17
CDH3P22223 RNU6-1031P-201ENST00000384773 107 ntBASIC1.49□□□□□ -2.17
CDH3P22223 RNU1-78P-201ENST00000391248 165 ntBASIC1.49□□□□□ -2.17
CDH3P22223 RNU4-62P-201ENST00000410125 130 ntBASIC1.49□□□□□ -2.17
CDH3P22223 Y_RNA.602-201ENST00000410535 92 ntBASIC1.49□□□□□ -2.17
CDH3P22223 RPL21P38-201ENST00000418090 167 ntBASIC1.49□□□□□ -2.17
CDH3P22223 AL135790.2-201ENST00000437701 267 ntBASIC1.49□□□□□ -2.17
CDH3P22223 RNU7-34P-201ENST00000459394 64 ntBASIC1.49□□□□□ -2.17
CDH3P22223 AC098869.1-201ENST00000481627 292 ntBASIC1.49□□□□□ -2.17
CDH3P22223 MRPS35P2-201ENST00000508242 191 ntBASIC1.49□□□□□ -2.17
CDH3P22223 SNORA40.15-201ENST00000516884 107 ntBASIC1.49□□□□□ -2.17
CDH3P22223 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.49□□□□□ -2.17
CDH3P22223 PRR13P7-201ENST00000605538 430 ntBASIC1.49□□□□□ -2.17
CDH3P22223 Y_RNA.812-201ENST00000610788 101 ntBASIC1.49□□□□□ -2.17
CDH3P22223 Y_RNA.784-201ENST00000613803 101 ntBASIC1.49□□□□□ -2.17
CDH3P22223 Y_RNA.787-201ENST00000616522 101 ntBASIC1.49□□□□□ -2.17
CDH3P22223 Y_RNA.780-201ENST00000617336 101 ntBASIC1.49□□□□□ -2.17
CDH3P22223 Y_RNA.801-201ENST00000619005 101 ntBASIC1.49□□□□□ -2.17
CDH3P22223 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.48□□□□□ -2.17
CDH3P22223 AC100821.1-201ENST00000523153 2479 ntBASIC1.48□□□□□ -2.17
CDH3P22223 Y_RNA.19-201ENST00000362462 99 ntBASIC1.48□□□□□ -2.17
CDH3P22223 SNORA1B-201ENST00000362535 133 ntBASIC1.48□□□□□ -2.17
CDH3P22223 RNU6-770P-201ENST00000363929 105 ntBASIC1.48□□□□□ -2.17
CDH3P22223 Y_RNA.383-201ENST00000383855 97 ntBASIC1.48□□□□□ -2.17
CDH3P22223 Y_RNA.422-201ENST00000384054 114 ntBASIC1.48□□□□□ -2.17
CDH3P22223 RNU6-1160P-201ENST00000384546 104 ntBASIC1.48□□□□□ -2.17
CDH3P22223 RNU6-950P-201ENST00000384651 107 ntBASIC1.48□□□□□ -2.17
CDH3P22223 Y_RNA.581-201ENST00000391017 97 ntBASIC1.48□□□□□ -2.17
CDH3P22223 RNU11-5P-201ENST00000391216 129 ntBASIC1.48□□□□□ -2.17
CDH3P22223 AL078595.1-201ENST00000404458 226 ntBASIC1.48□□□□□ -2.17
CDH3P22223 AL590004.1-201ENST00000405321 300 ntBASIC1.48□□□□□ -2.17
CDH3P22223 MIR1267-201ENST00000408723 78 ntBASIC1.48□□□□□ -2.17
CDH3P22223 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.48□□□□□ -2.17
CDH3P22223 FTH1P12-201ENST00000432137 551 ntBASIC1.48□□□□□ -2.17
CDH3P22223 RPS4XP11-201ENST00000446897 772 ntBASIC1.48□□□□□ -2.17
CDH3P22223 RPS20P10-201ENST00000451209 253 ntBASIC1.48□□□□□ -2.17
CDH3P22223 snoU13.9-201ENST00000458927 103 ntBASIC1.48□□□□□ -2.17
CDH3P22223 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.48□□□□□ -2.17
CDH3P22223 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.48□□□□□ -2.17
CDH3P22223 RNY3P15-201ENST00000516297 97 ntBASIC1.48□□□□□ -2.17
CDH3P22223 RNU6-1096P-201ENST00000517089 102 ntBASIC1.48□□□□□ -2.17
CDH3P22223 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.48□□□□□ -2.17
CDH3P22223 AL645939.4-201ENST00000604495 135 ntBASIC1.48□□□□□ -2.17
CDH3P22223 AC021506.2-201ENST00000612354 169 ntBASIC1.48□□□□□ -2.17
CDH3P22223 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
CDH3P22223 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
CDH3P22223 Y_RNA.64-201ENST00000362845 102 ntBASIC1.47□□□□□ -2.17
CDH3P22223 snoU2_19.2-201ENST00000363024 80 ntBASIC1.47□□□□□ -2.17
CDH3P22223 SNORA63C-201ENST00000364578 129 ntBASIC1.47□□□□□ -2.17
CDH3P22223 Y_RNA.310-201ENST00000365063 113 ntBASIC1.47□□□□□ -2.17
CDH3P22223 Y_RNA.418-201ENST00000384029 102 ntBASIC1.47□□□□□ -2.17
CDH3P22223 MIR606-201ENST00000384851 96 ntBASIC1.47□□□□□ -2.17
CDH3P22223 MIR215-201ENST00000384858 110 ntBASIC1.47□□□□□ -2.17
CDH3P22223 MIR520G-201ENST00000385064 90 ntBASIC1.47□□□□□ -2.17
CDH3P22223 MIR1323-201ENST00000408090 73 ntBASIC1.47□□□□□ -2.17
CDH3P22223 RNU6-855P-201ENST00000410395 104 ntBASIC1.47□□□□□ -2.17
CDH3P22223 RNU6-710P-201ENST00000410424 105 ntBASIC1.47□□□□□ -2.17
CDH3P22223 RN7SKP200-201ENST00000410564 320 ntBASIC1.47□□□□□ -2.17
CDH3P22223 POLR2KP2-201ENST00000438155 177 ntBASIC1.47□□□□□ -2.17
CDH3P22223 AC245517.4-201ENST00000448601 281 ntBASIC1.47□□□□□ -2.17
CDH3P22223 HSPE1P24-201ENST00000450782 238 ntBASIC1.47□□□□□ -2.17
CDH3P22223 HMGN1P10-201ENST00000474557 553 ntBASIC1.47□□□□□ -2.17
CDH3P22223 AC023790.1-201ENST00000482174 347 ntBASIC1.47□□□□□ -2.17
CDH3P22223 AL442663.2-201ENST00000554385 511 ntBASIC1.47□□□□□ -2.17
CDH3P22223 AC006504.6-201ENST00000590142 199 ntBASIC1.47□□□□□ -2.17
CDH3P22223 AL512598.1-201ENST00000610158 273 ntBASIC1.47□□□□□ -2.17
CDH3P22223 MIR7974-201ENST00000615835 79 ntBASIC1.47□□□□□ -2.17
CDH3P22223 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
CDH3P22223 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
CDH3P22223 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
CDH3P22223 RNU4-90P-201ENST00000362773 141 ntBASIC1.46□□□□□ -2.18
CDH3P22223 RNU4-80P-201ENST00000363200 141 ntBASIC1.46□□□□□ -2.18
CDH3P22223 Y_RNA.368-201ENST00000365547 113 ntBASIC1.46□□□□□ -2.18
CDH3P22223 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
CDH3P22223 MIR1304-201ENST00000408243 91 ntBASIC1.46□□□□□ -2.18
CDH3P22223 BTF3P4-201ENST00000418852 495 ntBASIC1.46□□□□□ -2.18
CDH3P22223 STAG3L5P-204ENST00000443759 179 ntBASIC1.46□□□□□ -2.18
CDH3P22223 SNORA31.24-201ENST00000517232 57 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms