Protein–RNA interactions for Protein: P19793

RXRA, Retinoic acid receptor RXR-alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRAP19793 AC024614.2-201ENST00000577584 372 ntBASIC1.95□□□□□ -2.1
RXRAP19793 AC022217.4-201ENST00000604389 163 ntBASIC1.95□□□□□ -2.1
RXRAP19793 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.95□□□□□ -2.1
RXRAP19793 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
RXRAP19793 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
RXRAP19793 AC018630.2-201ENST00000534866 2403 ntBASIC1.94□□□□□ -2.1
RXRAP19793 Y_RNA.16-201ENST00000362421 102 ntBASIC1.94□□□□□ -2.1
RXRAP19793 SNORD81.1-201ENST00000363064 77 ntBASIC1.94□□□□□ -2.1
RXRAP19793 Y_RNA.237-201ENST00000364439 102 ntBASIC1.94□□□□□ -2.1
RXRAP19793 RNU6-1318P-201ENST00000365389 103 ntBASIC1.94□□□□□ -2.1
RXRAP19793 Y_RNA.489-201ENST00000384410 101 ntBASIC1.94□□□□□ -2.1
RXRAP19793 Y_RNA.541-201ENST00000384640 113 ntBASIC1.94□□□□□ -2.1
RXRAP19793 Y_RNA.562-201ENST00000384695 113 ntBASIC1.94□□□□□ -2.1
RXRAP19793 RNU4-30P-201ENST00000410245 143 ntBASIC1.94□□□□□ -2.1
RXRAP19793 RNU2-7P-201ENST00000410794 178 ntBASIC1.94□□□□□ -2.1
RXRAP19793 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.94□□□□□ -2.1
RXRAP19793 snoU13.23-201ENST00000458863 104 ntBASIC1.94□□□□□ -2.1
RXRAP19793 RNU6-1278P-201ENST00000516130 107 ntBASIC1.94□□□□□ -2.1
RXRAP19793 Y_RNA.680-201ENST00000516441 93 ntBASIC1.94□□□□□ -2.1
RXRAP19793 RNU7-110P-201ENST00000516891 62 ntBASIC1.94□□□□□ -2.1
RXRAP19793 DEFB108E-201ENST00000524692 240 ntBASIC1.94□□□□□ -2.1
RXRAP19793 AC012433.1-201ENST00000588916 398 ntBASIC1.94□□□□□ -2.1
RXRAP19793 AC127459.3-201ENST00000624328 466 ntBASIC1.94□□□□□ -2.1
RXRAP19793 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
RXRAP19793 RNU6-379P-201ENST00000363813 104 ntBASIC1.93□□□□□ -2.1
RXRAP19793 RNU6-290P-201ENST00000365212 101 ntBASIC1.93□□□□□ -2.1
RXRAP19793 Y_RNA.331-201ENST00000365267 102 ntBASIC1.93□□□□□ -2.1
RXRAP19793 Y_RNA.477-201ENST00000384352 108 ntBASIC1.93□□□□□ -2.1
RXRAP19793 RNU6-21P-201ENST00000384710 107 ntBASIC1.93□□□□□ -2.1
RXRAP19793 FTH1P12-201ENST00000432137 551 ntBASIC1.93□□□□□ -2.1
RXRAP19793 AC108059.2-201ENST00000434626 151 ntBASIC1.93□□□□□ -2.1
RXRAP19793 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.93□□□□□ -2.1
RXRAP19793 AL606517.2-201ENST00000442855 241 ntBASIC1.93□□□□□ -2.1
RXRAP19793 HSPE1P25-201ENST00000455484 251 ntBASIC1.93□□□□□ -2.1
RXRAP19793 MTND1P19-201ENST00000511780 315 ntBASIC1.93□□□□□ -2.1
RXRAP19793 MIR3128-201ENST00000581957 66 ntBASIC1.93□□□□□ -2.1
RXRAP19793 AC091178.2-201ENST00000584401 117 ntBASIC1.93□□□□□ -2.1
RXRAP19793 AC073413.2-201ENST00000604332 360 ntBASIC1.93□□□□□ -2.1
RXRAP19793 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.93□□□□□ -2.1
RXRAP19793 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
RXRAP19793 AL391987.6-201ENST00000305671 199 ntBASIC1.92□□□□□ -2.1
RXRAP19793 RNU4-90P-201ENST00000362773 141 ntBASIC1.92□□□□□ -2.1
RXRAP19793 Y_RNA.60-201ENST00000362831 98 ntBASIC1.92□□□□□ -2.1
RXRAP19793 Y_RNA.286-201ENST00000364813 102 ntBASIC1.92□□□□□ -2.1
RXRAP19793 RNA5SP190-201ENST00000365222 118 ntBASIC1.92□□□□□ -2.1
RXRAP19793 RNU6-950P-201ENST00000384651 107 ntBASIC1.92□□□□□ -2.1
RXRAP19793 RNA5SP109-201ENST00000391010 116 ntBASIC1.92□□□□□ -2.1
RXRAP19793 RPL36AP21-201ENST00000490372 323 ntBASIC1.92□□□□□ -2.1
RXRAP19793 SEPT14P8-201ENST00000508026 178 ntBASIC1.92□□□□□ -2.1
RXRAP19793 RNU6-1338P-201ENST00000516328 91 ntBASIC1.92□□□□□ -2.1
RXRAP19793 RNU6-388P-201ENST00000517012 105 ntBASIC1.92□□□□□ -2.1
RXRAP19793 RNU6-389P-201ENST00000517048 105 ntBASIC1.92□□□□□ -2.1
RXRAP19793 CBX3P4-201ENST00000538909 354 ntBASIC1.92□□□□□ -2.1
RXRAP19793 RPL21P9-201ENST00000556149 474 ntBASIC1.92□□□□□ -2.1
RXRAP19793 AC005357.1-201ENST00000588399 301 ntBASIC1.92□□□□□ -2.1
RXRAP19793 SNORD113-5-201ENST00000607261 78 ntBASIC1.92□□□□□ -2.1
RXRAP19793 MIR335-201ENST00000362173 94 ntBASIC1.91□□□□□ -2.1
RXRAP19793 RNA5SP363-201ENST00000365072 115 ntBASIC1.91□□□□□ -2.1
RXRAP19793 MIR562-201ENST00000384894 95 ntBASIC1.91□□□□□ -2.1
RXRAP19793 RNU6-482P-201ENST00000391068 107 ntBASIC1.91□□□□□ -2.1
RXRAP19793 MIR548H3-201ENST00000408771 118 ntBASIC1.91□□□□□ -2.1
RXRAP19793 MTND4LP30-201ENST00000454092 297 ntBASIC1.91□□□□□ -2.1
RXRAP19793 snoU13.27-201ENST00000459278 104 ntBASIC1.91□□□□□ -2.1
RXRAP19793 RNU6-1023P-201ENST00000516137 106 ntBASIC1.91□□□□□ -2.1
RXRAP19793 RNU6-548P-201ENST00000517083 115 ntBASIC1.91□□□□□ -2.1
RXRAP19793 AC015712.3-201ENST00000559380 164 ntBASIC1.91□□□□□ -2.1
RXRAP19793 MIR3668-201ENST00000582138 75 ntBASIC1.91□□□□□ -2.1
RXRAP19793 MIR6079-201ENST00000635807 62 ntBASIC1.91□□□□□ -2.1
RXRAP19793 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
RXRAP19793 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
RXRAP19793 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
RXRAP19793 RNU6-324P-201ENST00000363957 106 ntBASIC1.9□□□□□ -2.11
RXRAP19793 Y_RNA.329-201ENST00000365209 107 ntBASIC1.9□□□□□ -2.11
RXRAP19793 SNORA4.2-201ENST00000365313 147 ntBASIC1.9□□□□□ -2.11
RXRAP19793 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.9□□□□□ -2.11
RXRAP19793 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
RXRAP19793 RNU6-710P-201ENST00000410424 105 ntBASIC1.9□□□□□ -2.11
RXRAP19793 RNU6-847P-201ENST00000411115 108 ntBASIC1.9□□□□□ -2.11
RXRAP19793 RN7SKP101-201ENST00000411376 320 ntBASIC1.9□□□□□ -2.11
RXRAP19793 RPL31P63-201ENST00000422565 375 ntBASIC1.9□□□□□ -2.11
RXRAP19793 Y_RNA.638-201ENST00000459374 113 ntBASIC1.9□□□□□ -2.11
RXRAP19793 Y_RNA.673-201ENST00000516306 88 ntBASIC1.9□□□□□ -2.11
RXRAP19793 RNU6-1337P-201ENST00000516525 95 ntBASIC1.9□□□□□ -2.11
RXRAP19793 SCARNA24.2-201ENST00000516968 130 ntBASIC1.9□□□□□ -2.11
RXRAP19793 RNU6-341P-201ENST00000516973 96 ntBASIC1.9□□□□□ -2.11
RXRAP19793 SNORA44.1-201ENST00000517031 108 ntBASIC1.9□□□□□ -2.11
RXRAP19793 RNU6-794P-201ENST00000517261 64 ntBASIC1.9□□□□□ -2.11
RXRAP19793 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.9□□□□□ -2.11
RXRAP19793 AC078938.1-201ENST00000620993 318 ntBASIC1.9□□□□□ -2.11
RXRAP19793 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.9□□□□□ -2.11
RXRAP19793 RNU1-17P-201ENST00000363022 152 ntBASIC1.89□□□□□ -2.11
RXRAP19793 SNORA20.1-201ENST00000364790 130 ntBASIC1.89□□□□□ -2.11
RXRAP19793 Y_RNA.416-201ENST00000384014 113 ntBASIC1.89□□□□□ -2.11
RXRAP19793 Y_RNA.478-201ENST00000384358 107 ntBASIC1.89□□□□□ -2.11
RXRAP19793 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.89□□□□□ -2.11
RXRAP19793 AC245047.3-201ENST00000429428 127 ntBASIC1.89□□□□□ -2.11
RXRAP19793 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.89□□□□□ -2.11
RXRAP19793 SNORA31.10-201ENST00000516482 106 ntBASIC1.89□□□□□ -2.11
RXRAP19793 MIR3122-201ENST00000577243 73 ntBASIC1.89□□□□□ -2.11
RXRAP19793 MIR502-201ENST00000606349 86 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 216.4 ms