Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 Y_RNA.242-201ENST00000364473 110 ntBASIC3.26□□□□□ -1.89
RARAP10276 Y_RNA.267-201ENST00000364679 109 ntBASIC3.26□□□□□ -1.89
RARAP10276 Y_RNA.549-201ENST00000384657 102 ntBASIC3.26□□□□□ -1.89
RARAP10276 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3.26□□□□□ -1.89
RARAP10276 AC087685.1-201ENST00000587507 141 ntBASIC3.26□□□□□ -1.89
RARAP10276 AL591926.4-201ENST00000616895 298 ntBASIC3.26□□□□□ -1.89
RARAP10276 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
RARAP10276 AL355596.1-201ENST00000565399 3996 ntBASIC3.26□□□□□ -1.89
RARAP10276 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.26□□□□□ -1.89
RARAP10276 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
RARAP10276 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RARAP10276 RNU6-301P-201ENST00000384277 107 ntBASIC3.25□□□□□ -1.89
RARAP10276 RNU1-101P-201ENST00000391171 127 ntBASIC3.25□□□□□ -1.89
RARAP10276 AL353689.1-201ENST00000438895 199 ntBASIC3.25□□□□□ -1.89
RARAP10276 RN7SL863P-201ENST00000462370 296 ntBASIC3.25□□□□□ -1.89
RARAP10276 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.25□□□□□ -1.89
RARAP10276 RNU6-1041P-201ENST00000516254 102 ntBASIC3.25□□□□□ -1.89
RARAP10276 AC009831.4-201ENST00000620744 325 ntBASIC3.25□□□□□ -1.89
RARAP10276 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RARAP10276 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.24□□□□□ -1.89
RARAP10276 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
RARAP10276 RNU6-766P-201ENST00000362478 107 ntBASIC3.24□□□□□ -1.89
RARAP10276 SNORA7.4-201ENST00000384249 137 ntBASIC3.24□□□□□ -1.89
RARAP10276 RNU6-905P-201ENST00000384434 107 ntBASIC3.24□□□□□ -1.89
RARAP10276 RNVU1-14-201ENST00000384770 164 ntBASIC3.24□□□□□ -1.89
RARAP10276 EDDM3CP-201ENST00000415977 425 ntBASIC3.24□□□□□ -1.89
RARAP10276 AC023141.11-201ENST00000508864 202 ntBASIC3.24□□□□□ -1.89
RARAP10276 MIR5197-201ENST00000583721 112 ntBASIC3.24□□□□□ -1.89
RARAP10276 AL353149.1-201ENST00000610667 244 ntBASIC3.24□□□□□ -1.89
RARAP10276 MIR7112-201ENST00000616126 65 ntBASIC3.24□□□□□ -1.89
RARAP10276 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
RARAP10276 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
RARAP10276 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.23□□□□□ -1.89
RARAP10276 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
RARAP10276 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
RARAP10276 Y_RNA.163-201ENST00000363702 113 ntBASIC3.23□□□□□ -1.89
RARAP10276 Y_RNA.328-201ENST00000365208 113 ntBASIC3.23□□□□□ -1.89
RARAP10276 Y_RNA.348-201ENST00000365403 103 ntBASIC3.23□□□□□ -1.89
RARAP10276 MIR592-201ENST00000384959 97 ntBASIC3.23□□□□□ -1.89
RARAP10276 MIR522-201ENST00000385071 87 ntBASIC3.23□□□□□ -1.89
RARAP10276 RNU4-47P-201ENST00000410876 114 ntBASIC3.23□□□□□ -1.89
RARAP10276 RNA5SP120-201ENST00000410900 112 ntBASIC3.23□□□□□ -1.89
RARAP10276 RN7SL20P-201ENST00000488827 297 ntBASIC3.23□□□□□ -1.89
RARAP10276 Y_RNA.714-201ENST00000517065 90 ntBASIC3.23□□□□□ -1.89
RARAP10276 MIR5680-201ENST00000577577 84 ntBASIC3.23□□□□□ -1.89
RARAP10276 UBL5P2-201ENST00000583788 219 ntBASIC3.23□□□□□ -1.89
RARAP10276 AC022217.4-201ENST00000604389 163 ntBASIC3.23□□□□□ -1.89
RARAP10276 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
RARAP10276 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
RARAP10276 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.23□□□□□ -1.89
RARAP10276 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
RARAP10276 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
RARAP10276 RNA5SP72-201ENST00000364442 117 ntBASIC3.22□□□□□ -1.89
RARAP10276 RNU6-756P-201ENST00000383997 107 ntBASIC3.22□□□□□ -1.89
RARAP10276 RNU2-63P-201ENST00000410792 194 ntBASIC3.22□□□□□ -1.89
RARAP10276 FTH1P12-201ENST00000432137 551 ntBASIC3.22□□□□□ -1.89
RARAP10276 RN7SL601P-201ENST00000471221 293 ntBASIC3.22□□□□□ -1.89
RARAP10276 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.22□□□□□ -1.89
RARAP10276 RN7SKP43-201ENST00000516173 320 ntBASIC3.22□□□□□ -1.89
RARAP10276 RNU1-142P-201ENST00000516682 145 ntBASIC3.22□□□□□ -1.89
RARAP10276 RNU6-667P-201ENST00000517186 102 ntBASIC3.22□□□□□ -1.89
RARAP10276 AC091544.4-201ENST00000555268 342 ntBASIC3.22□□□□□ -1.89
RARAP10276 AL355297.2-201ENST00000604792 129 ntBASIC3.22□□□□□ -1.89
RARAP10276 AL035470.1-201ENST00000622571 220 ntBASIC3.22□□□□□ -1.89
RARAP10276 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.22□□□□□ -1.89
RARAP10276 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
RARAP10276 SNORA1B-201ENST00000362535 133 ntBASIC3.21□□□□□ -1.9
RARAP10276 SNORA33-201ENST00000363664 130 ntBASIC3.21□□□□□ -1.9
RARAP10276 RNU6-640P-201ENST00000363693 105 ntBASIC3.21□□□□□ -1.9
RARAP10276 SNORD15B-201ENST00000384714 146 ntBASIC3.21□□□□□ -1.9
RARAP10276 SNORD67-201ENST00000390833 111 ntBASIC3.21□□□□□ -1.9
RARAP10276 AL117342.1-201ENST00000404861 406 ntBASIC3.21□□□□□ -1.9
RARAP10276 RNA5SP344-201ENST00000411081 104 ntBASIC3.21□□□□□ -1.9
RARAP10276 AC018868.1-201ENST00000491307 315 ntBASIC3.21□□□□□ -1.9
RARAP10276 RPS26P48-201ENST00000491713 339 ntBASIC3.21□□□□□ -1.9
RARAP10276 RNU6-240P-201ENST00000516098 97 ntBASIC3.21□□□□□ -1.9
RARAP10276 AC024614.2-201ENST00000577584 372 ntBASIC3.21□□□□□ -1.9
RARAP10276 5S_rRNA.11-201ENST00000618635 84 ntBASIC3.21□□□□□ -1.9
RARAP10276 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
RARAP10276 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
RARAP10276 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.2□□□□□ -1.9
RARAP10276 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
RARAP10276 AL590004.2-201ENST00000404787 371 ntBASIC3.2□□□□□ -1.9
RARAP10276 MIR1302-4-201ENST00000408701 150 ntBASIC3.2□□□□□ -1.9
RARAP10276 AP001318.4-201ENST00000616637 121 ntBASIC3.2□□□□□ -1.9
RARAP10276 MIR622-201ENST00000638396 96 ntBASIC3.2□□□□□ -1.9
RARAP10276 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
RARAP10276 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RARAP10276 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
RARAP10276 RNU6-1014P-201ENST00000383940 103 ntBASIC3.19□□□□□ -1.9
RARAP10276 SNORA51.5-201ENST00000384126 131 ntBASIC3.19□□□□□ -1.9
RARAP10276 MIR561-201ENST00000385216 97 ntBASIC3.19□□□□□ -1.9
RARAP10276 MIR181B1-201ENST00000385240 110 ntBASIC3.19□□□□□ -1.9
RARAP10276 MIR1302-5-201ENST00000408164 150 ntBASIC3.19□□□□□ -1.9
RARAP10276 MIR548O-201ENST00000408583 114 ntBASIC3.19□□□□□ -1.9
RARAP10276 HMGN2P32-201ENST00000444648 269 ntBASIC3.19□□□□□ -1.9
RARAP10276 AL049830.1-201ENST00000468034 425 ntBASIC3.19□□□□□ -1.9
RARAP10276 AP002004.2-201ENST00000531656 154 ntBASIC3.19□□□□□ -1.9
RARAP10276 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.19□□□□□ -1.9
RARAP10276 AC134878.1-201ENST00000619901 243 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms